ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02324:0887

Extra

PDB:
ATOM 1 O3' G A2323 57.410 108.709 94.484 1.00 34.91 O
ATOM 2 P A A2324 56.709 107.337 94.042 1.00 31.56 P
ATOM 3 OP1 A A2324 55.249 107.565 93.927 1.00 33.29 O
ATOM 4 OP2 A A2324 57.218 106.285 94.946 1.00 33.96 O
ATOM 5 O5' A A2324 57.288 107.050 92.590 1.00 32.57 O
ATOM 6 C5' A A2324 58.673 106.722 92.398 1.00 30.48 C
ATOM 7 C4' A A2324 58.808 105.284 91.973 1.00 29.43 C
ATOM 8 O4' A A2324 57.969 105.036 90.807 1.00 30.46 O
ATOM 9 C3' A A2324 60.212 104.824 91.600 1.00 30.40 C
ATOM 10 O3' A A2324 60.422 103.519 92.109 1.00 30.43 O
ATOM 11 C2' A A2324 60.170 104.802 90.069 1.00 30.61 C
ATOM 12 O2' A A2324 61.043 103.852 89.487 1.00 29.12 O
ATOM 13 C1' A A2324 58.725 104.399 89.804 1.00 29.80 C
ATOM 14 N9 A A2324 58.219 104.829 88.502 1.00 32.69 N
ATOM 15 C8 A A2324 58.105 106.110 88.022 1.00 33.79 C
ATOM 16 N7 A A2324 57.610 106.180 86.810 1.00 34.10 N
ATOM 17 C5 A A2324 57.378 104.854 86.464 1.00 35.03 C
ATOM 18 C6 A A2324 56.850 104.245 85.296 1.00 35.06 C
ATOM 19 N6 A A2324 56.435 104.923 84.217 1.00 32.97 N
ATOM 20 N1 A A2324 56.761 102.899 85.279 1.00 34.58 N
ATOM 21 C2 A A2324 57.165 102.216 86.355 1.00 35.06 C
ATOM 22 N3 A A2324 57.669 102.666 87.504 1.00 35.72 N
ATOM 23 C4 A A2324 57.752 104.010 87.496 1.00 35.07 C
ATOM 24 P U A2325 60.806 103.322 93.655 1.00 32.27 P
ATOM 25 OP1 U A2325 60.915 101.857 93.884 1.00 34.23 O
ATOM 26 OP2 U A2325 59.879 104.133 94.483 1.00 31.41 O
ATOM 27 O5' U A2325 62.265 103.934 93.794 1.00 32.02 O
TER

ATOM 1 O3' C B 886 57.951 108.681 81.271 1.00 27.04 O
ATOM 2 P U B 887 56.372 108.489 81.470 1.00 28.67 P
ATOM 3 OP1 U B 887 56.176 107.992 82.861 1.00 26.15 O
ATOM 4 OP2 U B 887 55.850 107.699 80.324 1.00 28.75 O
ATOM 5 O5' U B 887 55.791 109.971 81.407 1.00 27.15 O
ATOM 6 C5' U B 887 56.040 110.883 82.487 1.00 27.55 C
ATOM 7 C4' U B 887 55.681 112.299 82.107 1.00 26.43 C
ATOM 8 O4' U B 887 56.426 112.720 80.938 1.00 27.08 O
ATOM 9 C3' U B 887 54.260 112.585 81.672 1.00 26.78 C
ATOM 10 O3' U B 887 53.342 112.609 82.756 1.00 28.35 O
ATOM 11 C2' U B 887 54.427 113.975 81.085 1.00 27.24 C
ATOM 12 O2' U B 887 54.584 114.946 82.099 1.00 29.20 O
ATOM 13 C1' U B 887 55.757 113.826 80.349 1.00 28.57 C
ATOM 14 N1 U B 887 55.551 113.594 78.907 1.00 30.36 N
ATOM 15 C2 U B 887 55.200 114.699 78.142 1.00 30.28 C
ATOM 16 O2 U B 887 55.119 115.823 78.603 1.00 32.52 O
ATOM 17 N3 U B 887 54.947 114.441 76.821 1.00 29.33 N
ATOM 18 C4 U B 887 55.013 113.228 76.186 1.00 31.11 C
ATOM 19 O4 U B 887 54.621 113.142 75.019 1.00 31.30 O
ATOM 20 C5 U B 887 55.424 112.135 77.027 1.00 30.59 C
ATOM 21 C6 U B 887 55.670 112.349 78.326 1.00 29.41 C
ATOM 22 P G B 888 51.784 112.307 82.483 1.00 27.00 P
ATOM 23 OP1 G B 888 51.067 112.434 83.781 1.00 25.69 O
ATOM 24 OP2 G B 888 51.700 111.048 81.716 1.00 26.88 O
ATOM 25 O5' G B 888 51.315 113.484 81.523 1.00 22.90 O
TER

Atoms:
OP1: (55.249,107.565,93.927)
OP2: (57.218,106.285,94.946)
C3': (60.212,104.824,91.600)
C1': (58.725,104.399,89.804)
C5': (58.673,106.722,92.398)
O4': (57.969,105.036,90.807)
C8: (58.105,106.110,88.022)
O2': (61.043,103.852,89.487)
C6: (56.850,104.245,85.296)
C5: (57.378,104.854,86.464)
C4: (57.752,104.010,87.496)
P: (56.709,107.337,94.042)
C4': (58.808,105.284,91.973)
C2': (60.170,104.802,90.069)
C2: (57.165,102.216,86.355)
N1: (56.761,102.899,85.279)
N3: (57.669,102.666,87.504)
N6: (56.435,104.923,84.217)
N7: (57.610,106.180,86.810)
N9: (58.219,104.829,88.502)
O5': (57.288,107.050,92.590)
O3': (60.422,103.519,92.109)
C4: (55.013,113.228,76.186)
N3: (54.947,114.441,76.821)
OP1: (56.176,107.992,82.861)
OP2: (55.850,107.699,80.324)
C2: (55.200,114.699,78.142)
C1': (55.757,113.826,80.349)
C3': (54.260,112.585,81.672)
O5': (55.791,109.971,81.407)
O4': (56.426,112.720,80.938)
C5': (56.040,110.883,82.487)
P: (56.372,108.489,81.470)
C4': (55.681,112.299,82.107)
C2': (54.427,113.975,81.085)
O2': (54.584,114.946,82.099)
N1: (55.551,113.594,78.907)
O4: (54.621,113.142,75.019)
O2: (55.119,115.823,78.603)
C6: (55.670,112.349,78.326)
C5: (55.424,112.135,77.027)
O3': (53.342,112.609,82.756)
Image (generated by PyMOL):
PyMOL image
show in jmol