Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02308:02124
Extra
PDB:
ATOM 1 O3' G A2307 74.235 88.295 72.461 1.00 47.45 O
ATOM 2 P A A2308 74.058 89.686 71.684 1.00 48.42 P
ATOM 3 OP1 A A2308 74.209 90.745 72.709 1.00 48.22 O
ATOM 4 OP2 A A2308 72.806 89.617 70.871 1.00 46.35 O
ATOM 5 O5' A A2308 75.353 89.787 70.755 1.00 46.97 O
ATOM 6 C5' A A2308 75.237 90.167 69.379 1.00 45.10 C
ATOM 7 C4' A A2308 75.972 91.466 69.104 1.00 43.62 C
ATOM 8 O4' A A2308 75.622 92.510 70.021 1.00 41.66 O
ATOM 9 C3' A A2308 77.495 91.514 69.138 1.00 42.61 C
ATOM 10 O3' A A2308 77.976 91.145 67.844 1.00 45.57 O
ATOM 11 C2' A A2308 77.806 92.998 69.432 1.00 41.35 C
ATOM 12 O2' A A2308 78.393 93.661 68.331 1.00 42.58 O
ATOM 13 C1' A A2308 76.415 93.598 69.658 1.00 38.98 C
ATOM 14 N9 A A2308 76.271 94.671 70.642 1.00 36.16 N
ATOM 15 C8 A A2308 77.239 95.296 71.390 1.00 35.32 C
ATOM 16 N7 A A2308 76.780 96.258 72.150 1.00 33.48 N
ATOM 17 C5 A A2308 75.415 96.261 71.895 1.00 32.84 C
ATOM 18 C6 A A2308 74.359 97.042 72.394 1.00 31.34 C
ATOM 19 N6 A A2308 74.516 98.013 73.298 1.00 29.75 N
ATOM 20 N1 A A2308 73.118 96.785 71.929 1.00 29.92 N
ATOM 21 C2 A A2308 72.959 95.814 71.035 1.00 28.39 C
ATOM 22 N3 A A2308 73.864 95.013 70.495 1.00 31.26 N
ATOM 23 C4 A A2308 75.088 95.288 70.974 1.00 33.41 C
ATOM 24 P A A2309 79.167 90.085 67.695 1.00 45.35 P
ATOM 25 OP1 A A2309 79.087 89.509 66.328 1.00 43.06 O
ATOM 26 OP2 A A2309 79.129 89.193 68.884 1.00 46.40 O
ATOM 27 O5' A A2309 80.484 90.968 67.792 1.00 46.33 O
TER
ATOM 1 O3' U B2123 77.742 100.490 73.711 1.00 32.77 O
ATOM 2 P U B2124 76.987 100.612 75.125 1.00 35.44 P
ATOM 3 OP1 U B2124 76.242 99.333 75.292 1.00 32.33 O
ATOM 4 OP2 U B2124 76.250 101.903 75.191 1.00 32.72 O
ATOM 5 O5' U B2124 78.166 100.639 76.196 1.00 33.07 O
ATOM 6 C5' U B2124 79.036 99.516 76.344 1.00 30.75 C
ATOM 7 C4' U B2124 80.226 99.877 77.188 1.00 30.66 C
ATOM 8 O4' U B2124 81.020 100.881 76.514 1.00 30.93 O
ATOM 9 C3' U B2124 79.948 100.503 78.541 1.00 30.02 C
ATOM 10 O3' U B2124 79.596 99.508 79.495 1.00 33.08 O
ATOM 11 C2' U B2124 81.294 101.150 78.860 1.00 30.00 C
ATOM 12 O2' U B2124 82.283 100.246 79.302 1.00 29.09 O
ATOM 13 C1' U B2124 81.730 101.641 77.481 1.00 30.63 C
ATOM 14 N1 U B2124 81.481 103.071 77.256 1.00 31.65 N
ATOM 15 C2 U B2124 82.388 103.976 77.781 1.00 31.73 C
ATOM 16 O2 U B2124 83.379 103.641 78.411 1.00 31.52 O
ATOM 17 N3 U B2124 82.095 105.291 77.532 1.00 31.58 N
ATOM 18 C4 U B2124 81.023 105.782 76.817 1.00 31.75 C
ATOM 19 O4 U B2124 80.933 106.991 76.613 1.00 33.66 O
ATOM 20 C5 U B2124 80.140 104.787 76.312 1.00 31.48 C
ATOM 21 C6 U B2124 80.389 103.502 76.543 1.00 31.63 C
ATOM 22 P G B2125 78.670 99.887 80.758 1.00 36.73 P
ATOM 23 OP1 G B2125 78.310 101.333 80.685 1.00 35.61 O
ATOM 24 OP2 G B2125 79.324 99.354 81.977 1.00 35.13 O
ATOM 25 O5' G B2125 77.342 99.041 80.521 1.00 38.20 O
TER
ATOM 2 P A A2308 74.058 89.686 71.684 1.00 48.42 P
ATOM 3 OP1 A A2308 74.209 90.745 72.709 1.00 48.22 O
ATOM 4 OP2 A A2308 72.806 89.617 70.871 1.00 46.35 O
ATOM 5 O5' A A2308 75.353 89.787 70.755 1.00 46.97 O
ATOM 6 C5' A A2308 75.237 90.167 69.379 1.00 45.10 C
ATOM 7 C4' A A2308 75.972 91.466 69.104 1.00 43.62 C
ATOM 8 O4' A A2308 75.622 92.510 70.021 1.00 41.66 O
ATOM 9 C3' A A2308 77.495 91.514 69.138 1.00 42.61 C
ATOM 10 O3' A A2308 77.976 91.145 67.844 1.00 45.57 O
ATOM 11 C2' A A2308 77.806 92.998 69.432 1.00 41.35 C
ATOM 12 O2' A A2308 78.393 93.661 68.331 1.00 42.58 O
ATOM 13 C1' A A2308 76.415 93.598 69.658 1.00 38.98 C
ATOM 14 N9 A A2308 76.271 94.671 70.642 1.00 36.16 N
ATOM 15 C8 A A2308 77.239 95.296 71.390 1.00 35.32 C
ATOM 16 N7 A A2308 76.780 96.258 72.150 1.00 33.48 N
ATOM 17 C5 A A2308 75.415 96.261 71.895 1.00 32.84 C
ATOM 18 C6 A A2308 74.359 97.042 72.394 1.00 31.34 C
ATOM 19 N6 A A2308 74.516 98.013 73.298 1.00 29.75 N
ATOM 20 N1 A A2308 73.118 96.785 71.929 1.00 29.92 N
ATOM 21 C2 A A2308 72.959 95.814 71.035 1.00 28.39 C
ATOM 22 N3 A A2308 73.864 95.013 70.495 1.00 31.26 N
ATOM 23 C4 A A2308 75.088 95.288 70.974 1.00 33.41 C
ATOM 24 P A A2309 79.167 90.085 67.695 1.00 45.35 P
ATOM 25 OP1 A A2309 79.087 89.509 66.328 1.00 43.06 O
ATOM 26 OP2 A A2309 79.129 89.193 68.884 1.00 46.40 O
ATOM 27 O5' A A2309 80.484 90.968 67.792 1.00 46.33 O
TER
ATOM 1 O3' U B2123 77.742 100.490 73.711 1.00 32.77 O
ATOM 2 P U B2124 76.987 100.612 75.125 1.00 35.44 P
ATOM 3 OP1 U B2124 76.242 99.333 75.292 1.00 32.33 O
ATOM 4 OP2 U B2124 76.250 101.903 75.191 1.00 32.72 O
ATOM 5 O5' U B2124 78.166 100.639 76.196 1.00 33.07 O
ATOM 6 C5' U B2124 79.036 99.516 76.344 1.00 30.75 C
ATOM 7 C4' U B2124 80.226 99.877 77.188 1.00 30.66 C
ATOM 8 O4' U B2124 81.020 100.881 76.514 1.00 30.93 O
ATOM 9 C3' U B2124 79.948 100.503 78.541 1.00 30.02 C
ATOM 10 O3' U B2124 79.596 99.508 79.495 1.00 33.08 O
ATOM 11 C2' U B2124 81.294 101.150 78.860 1.00 30.00 C
ATOM 12 O2' U B2124 82.283 100.246 79.302 1.00 29.09 O
ATOM 13 C1' U B2124 81.730 101.641 77.481 1.00 30.63 C
ATOM 14 N1 U B2124 81.481 103.071 77.256 1.00 31.65 N
ATOM 15 C2 U B2124 82.388 103.976 77.781 1.00 31.73 C
ATOM 16 O2 U B2124 83.379 103.641 78.411 1.00 31.52 O
ATOM 17 N3 U B2124 82.095 105.291 77.532 1.00 31.58 N
ATOM 18 C4 U B2124 81.023 105.782 76.817 1.00 31.75 C
ATOM 19 O4 U B2124 80.933 106.991 76.613 1.00 33.66 O
ATOM 20 C5 U B2124 80.140 104.787 76.312 1.00 31.48 C
ATOM 21 C6 U B2124 80.389 103.502 76.543 1.00 31.63 C
ATOM 22 P G B2125 78.670 99.887 80.758 1.00 36.73 P
ATOM 23 OP1 G B2125 78.310 101.333 80.685 1.00 35.61 O
ATOM 24 OP2 G B2125 79.324 99.354 81.977 1.00 35.13 O
ATOM 25 O5' G B2125 77.342 99.041 80.521 1.00 38.20 O
TER
Atoms:
OP1: (74.209,90.745,72.709)
OP2: (72.806,89.617,70.871)
C3': (77.495,91.514,69.138)
C1': (76.415,93.598,69.658)
C5': (75.237,90.167,69.379)
O4': (75.622,92.510,70.021)
C8: (77.239,95.296,71.390)
O2': (78.393,93.661,68.331)
C6: (74.359,97.042,72.394)
C5: (75.415,96.261,71.895)
C4: (75.088,95.288,70.974)
P: (74.058,89.686,71.684)
C4': (75.972,91.466,69.104)
C2': (77.806,92.998,69.432)
C2: (72.959,95.814,71.035)
N1: (73.118,96.785,71.929)
N3: (73.864,95.013,70.495)
N6: (74.516,98.013,73.298)
N7: (76.780,96.258,72.150)
N9: (76.271,94.671,70.642)
O5': (75.353,89.787,70.755)
O3': (77.976,91.145,67.844)
OP2: (72.806,89.617,70.871)
C3': (77.495,91.514,69.138)
C1': (76.415,93.598,69.658)
C5': (75.237,90.167,69.379)
O4': (75.622,92.510,70.021)
C8: (77.239,95.296,71.390)
O2': (78.393,93.661,68.331)
C6: (74.359,97.042,72.394)
C5: (75.415,96.261,71.895)
C4: (75.088,95.288,70.974)
P: (74.058,89.686,71.684)
C4': (75.972,91.466,69.104)
C2': (77.806,92.998,69.432)
C2: (72.959,95.814,71.035)
N1: (73.118,96.785,71.929)
N3: (73.864,95.013,70.495)
N6: (74.516,98.013,73.298)
N7: (76.780,96.258,72.150)
N9: (76.271,94.671,70.642)
O5': (75.353,89.787,70.755)
O3': (77.976,91.145,67.844)
C4: (81.023,105.782,76.817)
N3: (82.095,105.291,77.532)
OP1: (76.242,99.333,75.292)
OP2: (76.250,101.903,75.191)
C2: (82.388,103.976,77.781)
C1': (81.730,101.641,77.481)
C3': (79.948,100.503,78.541)
O5': (78.166,100.639,76.196)
O4': (81.020,100.881,76.514)
C5': (79.036,99.516,76.344)
P: (76.987,100.612,75.125)
C4': (80.226,99.877,77.188)
C2': (81.294,101.150,78.860)
O2': (82.283,100.246,79.302)
N1: (81.481,103.071,77.256)
O4: (80.933,106.991,76.613)
O2: (83.379,103.641,78.411)
C6: (80.389,103.502,76.543)
C5: (80.140,104.787,76.312)
O3': (79.596,99.508,79.495)
N3: (82.095,105.291,77.532)
OP1: (76.242,99.333,75.292)
OP2: (76.250,101.903,75.191)
C2: (82.388,103.976,77.781)
C1': (81.730,101.641,77.481)
C3': (79.948,100.503,78.541)
O5': (78.166,100.639,76.196)
O4': (81.020,100.881,76.514)
C5': (79.036,99.516,76.344)
P: (76.987,100.612,75.125)
C4': (80.226,99.877,77.188)
C2': (81.294,101.150,78.860)
O2': (82.283,100.246,79.302)
N1: (81.481,103.071,77.256)
O4: (80.933,106.991,76.613)
O2: (83.379,103.641,78.411)
C6: (80.389,103.502,76.543)
C5: (80.140,104.787,76.312)
O3': (79.596,99.508,79.495)
Image (generated by PyMOL):