Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02324:0887
Extra
PDB:
ATOM 1 O3' G A2323 57.406 108.968 94.635 1.00 38.75 O
ATOM 2 P A A2324 56.687 107.597 94.203 1.00 37.09 P
ATOM 3 OP1 A A2324 55.225 107.833 94.173 1.00 38.15 O
ATOM 4 OP2 A A2324 57.240 106.524 95.061 1.00 37.45 O
ATOM 5 O5' A A2324 57.176 107.327 92.713 1.00 37.23 O
ATOM 6 C5' A A2324 58.549 107.001 92.430 1.00 36.89 C
ATOM 7 C4' A A2324 58.664 105.553 92.030 1.00 37.08 C
ATOM 8 O4' A A2324 57.832 105.285 90.864 1.00 37.72 O
ATOM 9 C3' A A2324 60.063 105.060 91.679 1.00 37.10 C
ATOM 10 O3' A A2324 60.225 103.757 92.215 1.00 38.77 O
ATOM 11 C2' A A2324 60.039 105.008 90.152 1.00 37.30 C
ATOM 12 O2' A A2324 60.911 104.028 89.624 1.00 38.24 O
ATOM 13 C1' A A2324 58.592 104.613 89.882 1.00 37.96 C
ATOM 14 N9 A A2324 58.093 104.996 88.557 1.00 39.56 N
ATOM 15 C8 A A2324 57.960 106.259 88.044 1.00 40.20 C
ATOM 16 N7 A A2324 57.478 106.288 86.825 1.00 40.40 N
ATOM 17 C5 A A2324 57.278 104.953 86.509 1.00 41.24 C
ATOM 18 C6 A A2324 56.782 104.311 85.349 1.00 42.21 C
ATOM 19 N6 A A2324 56.374 104.964 84.254 1.00 42.63 N
ATOM 20 N1 A A2324 56.718 102.962 85.354 1.00 41.67 N
ATOM 21 C2 A A2324 57.118 102.310 86.450 1.00 42.85 C
ATOM 22 N3 A A2324 57.596 102.797 87.601 1.00 44.06 N
ATOM 23 C4 A A2324 57.653 104.143 87.565 1.00 41.70 C
ATOM 24 P U A2325 60.709 103.580 93.739 1.00 39.87 P
ATOM 25 OP1 U A2325 60.582 102.137 94.057 1.00 42.11 O
ATOM 26 OP2 U A2325 60.008 104.580 94.587 1.00 37.64 O
ATOM 27 O5' U A2325 62.258 103.938 93.696 1.00 38.13 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
ATOM 2 P A A2324 56.687 107.597 94.203 1.00 37.09 P
ATOM 3 OP1 A A2324 55.225 107.833 94.173 1.00 38.15 O
ATOM 4 OP2 A A2324 57.240 106.524 95.061 1.00 37.45 O
ATOM 5 O5' A A2324 57.176 107.327 92.713 1.00 37.23 O
ATOM 6 C5' A A2324 58.549 107.001 92.430 1.00 36.89 C
ATOM 7 C4' A A2324 58.664 105.553 92.030 1.00 37.08 C
ATOM 8 O4' A A2324 57.832 105.285 90.864 1.00 37.72 O
ATOM 9 C3' A A2324 60.063 105.060 91.679 1.00 37.10 C
ATOM 10 O3' A A2324 60.225 103.757 92.215 1.00 38.77 O
ATOM 11 C2' A A2324 60.039 105.008 90.152 1.00 37.30 C
ATOM 12 O2' A A2324 60.911 104.028 89.624 1.00 38.24 O
ATOM 13 C1' A A2324 58.592 104.613 89.882 1.00 37.96 C
ATOM 14 N9 A A2324 58.093 104.996 88.557 1.00 39.56 N
ATOM 15 C8 A A2324 57.960 106.259 88.044 1.00 40.20 C
ATOM 16 N7 A A2324 57.478 106.288 86.825 1.00 40.40 N
ATOM 17 C5 A A2324 57.278 104.953 86.509 1.00 41.24 C
ATOM 18 C6 A A2324 56.782 104.311 85.349 1.00 42.21 C
ATOM 19 N6 A A2324 56.374 104.964 84.254 1.00 42.63 N
ATOM 20 N1 A A2324 56.718 102.962 85.354 1.00 41.67 N
ATOM 21 C2 A A2324 57.118 102.310 86.450 1.00 42.85 C
ATOM 22 N3 A A2324 57.596 102.797 87.601 1.00 44.06 N
ATOM 23 C4 A A2324 57.653 104.143 87.565 1.00 41.70 C
ATOM 24 P U A2325 60.709 103.580 93.739 1.00 39.87 P
ATOM 25 OP1 U A2325 60.582 102.137 94.057 1.00 42.11 O
ATOM 26 OP2 U A2325 60.008 104.580 94.587 1.00 37.64 O
ATOM 27 O5' U A2325 62.258 103.938 93.696 1.00 38.13 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
Atoms:
OP1: (55.225,107.833,94.173)
OP2: (57.240,106.524,95.061)
C3': (60.063,105.060,91.679)
C1': (58.592,104.613,89.882)
C5': (58.549,107.001,92.430)
O4': (57.832,105.285,90.864)
C8: (57.960,106.259,88.044)
O2': (60.911,104.028,89.624)
C6: (56.782,104.311,85.349)
C5: (57.278,104.953,86.509)
C4: (57.653,104.143,87.565)
P: (56.687,107.597,94.203)
C4': (58.664,105.553,92.030)
C2': (60.039,105.008,90.152)
C2: (57.118,102.310,86.450)
N1: (56.718,102.962,85.354)
N3: (57.596,102.797,87.601)
N6: (56.374,104.964,84.254)
N7: (57.478,106.288,86.825)
N9: (58.093,104.996,88.557)
O5': (57.176,107.327,92.713)
O3': (60.225,103.757,92.215)
OP2: (57.240,106.524,95.061)
C3': (60.063,105.060,91.679)
C1': (58.592,104.613,89.882)
C5': (58.549,107.001,92.430)
O4': (57.832,105.285,90.864)
C8: (57.960,106.259,88.044)
O2': (60.911,104.028,89.624)
C6: (56.782,104.311,85.349)
C5: (57.278,104.953,86.509)
C4: (57.653,104.143,87.565)
P: (56.687,107.597,94.203)
C4': (58.664,105.553,92.030)
C2': (60.039,105.008,90.152)
C2: (57.118,102.310,86.450)
N1: (56.718,102.962,85.354)
N3: (57.596,102.797,87.601)
N6: (56.374,104.964,84.254)
N7: (57.478,106.288,86.825)
N9: (58.093,104.996,88.557)
O5': (57.176,107.327,92.713)
O3': (60.225,103.757,92.215)
C4: (54.954,113.273,76.226)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
Image (generated by PyMOL):