ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0385:0384

Extra

PDB:
ATOM 1 O3' U A 384 83.726 88.583 38.549 1.00 49.77 O
ATOM 2 P A A 385 83.618 89.145 37.042 1.00 49.35 P
ATOM 3 OP1 A A 385 84.082 88.047 36.137 1.00 48.83 O
ATOM 4 OP2 A A 385 84.307 90.467 37.009 1.00 49.12 O
ATOM 5 O5' A A 385 82.072 89.369 36.727 1.00 43.61 O
ATOM 6 C5' A A 385 81.671 89.631 35.372 1.00 40.71 C
ATOM 7 C4' A A 385 80.176 89.576 35.224 1.00 37.55 C
ATOM 8 O4' A A 385 79.690 88.277 35.626 1.00 37.14 O
ATOM 9 C3' A A 385 79.382 90.541 36.075 1.00 37.48 C
ATOM 10 O3' A A 385 79.352 91.831 35.483 1.00 36.25 O
ATOM 11 C2' A A 385 78.006 89.891 36.095 1.00 37.33 C
ATOM 12 O2' A A 385 77.284 90.140 34.911 1.00 36.38 O
ATOM 13 C1' A A 385 78.376 88.407 36.136 1.00 37.19 C
ATOM 14 N9 A A 385 78.344 87.779 37.453 1.00 37.02 N
ATOM 15 C8 A A 385 78.723 88.283 38.673 1.00 37.22 C
ATOM 16 N7 A A 385 78.618 87.423 39.651 1.00 38.76 N
ATOM 17 C5 A A 385 78.126 86.279 39.036 1.00 40.34 C
ATOM 18 C6 A A 385 77.806 85.002 39.525 1.00 40.97 C
ATOM 19 N6 A A 385 77.962 84.641 40.801 1.00 40.27 N
ATOM 20 N1 A A 385 77.322 84.092 38.645 1.00 40.69 N
ATOM 21 C2 A A 385 77.183 84.450 37.364 1.00 39.08 C
ATOM 22 N3 A A 385 77.461 85.612 36.784 1.00 39.89 N
ATOM 23 C4 A A 385 77.936 86.493 37.686 1.00 38.95 C
ATOM 24 P U A 386 79.746 93.107 36.364 1.00 35.96 P
ATOM 25 OP1 U A 386 81.217 93.317 36.265 1.00 35.52 O
ATOM 26 OP2 U A 386 79.132 92.896 37.688 1.00 36.44 O
ATOM 27 O5' U A 386 78.994 94.318 35.656 1.00 33.01 O
TER

ATOM 1 O3' A B 383 79.321 87.970 43.719 1.00 35.20 O
ATOM 2 P U B 384 80.401 86.964 43.114 1.00 37.25 P
ATOM 3 OP1 U B 384 79.663 85.759 42.692 1.00 38.29 O
ATOM 4 OP2 U B 384 81.546 86.838 44.053 1.00 35.31 O
ATOM 5 O5' U B 384 80.889 87.698 41.796 1.00 38.95 O
ATOM 6 C5' U B 384 82.061 88.498 41.822 1.00 44.95 C
ATOM 7 C4' U B 384 83.008 88.045 40.749 1.00 49.13 C
ATOM 8 O4' U B 384 83.172 86.595 40.850 1.00 49.86 O
ATOM 9 C3' U B 384 82.556 88.322 39.317 1.00 50.34 C
ATOM 10 O3' U B 384 83.726 88.583 38.549 1.00 49.77 O
ATOM 11 C2' U B 384 81.940 86.990 38.909 1.00 52.04 C
ATOM 12 O2' U B 384 81.925 86.784 37.511 1.00 56.71 O
ATOM 13 C1' U B 384 82.887 86.010 39.598 1.00 50.53 C
ATOM 14 N1 U B 384 82.377 84.640 39.785 1.00 49.71 N
ATOM 15 C2 U B 384 83.303 83.618 39.933 1.00 48.41 C
ATOM 16 O2 U B 384 84.500 83.812 40.014 1.00 47.53 O
ATOM 17 N3 U B 384 82.770 82.356 39.988 1.00 47.91 N
ATOM 18 C4 U B 384 81.434 82.015 39.926 1.00 49.88 C
ATOM 19 O4 U B 384 81.113 80.826 39.853 1.00 51.05 O
ATOM 20 C5 U B 384 80.541 83.126 39.833 1.00 49.89 C
ATOM 21 C6 U B 384 81.026 84.365 39.771 1.00 49.51 C
ATOM 22 P A B 385 83.618 89.145 37.042 1.00 49.35 P
ATOM 23 OP1 A B 385 84.082 88.047 36.137 1.00 48.83 O
ATOM 24 OP2 A B 385 84.307 90.467 37.009 1.00 49.12 O
ATOM 25 O5' A B 385 82.072 89.369 36.727 1.00 43.61 O
TER

Atoms:
OP1: (84.082,88.047,36.137)
OP2: (84.307,90.467,37.009)
C3': (79.382,90.541,36.075)
C1': (78.376,88.407,36.136)
C5': (81.671,89.631,35.372)
O4': (79.690,88.277,35.626)
C8: (78.723,88.283,38.673)
O2': (77.284,90.140,34.911)
C6: (77.806,85.002,39.525)
C5: (78.126,86.279,39.036)
C4: (77.936,86.493,37.686)
P: (83.618,89.145,37.042)
C4': (80.176,89.576,35.224)
C2': (78.006,89.891,36.095)
C2: (77.183,84.450,37.364)
N1: (77.322,84.092,38.645)
N3: (77.461,85.612,36.784)
N6: (77.962,84.641,40.801)
N7: (78.618,87.423,39.651)
N9: (78.344,87.779,37.453)
O5': (82.072,89.369,36.727)
O3': (79.352,91.831,35.483)
C4: (81.434,82.015,39.926)
N3: (82.770,82.356,39.988)
OP1: (79.663,85.759,42.692)
OP2: (81.546,86.838,44.053)
C2: (83.303,83.618,39.933)
C1': (82.887,86.010,39.598)
C3': (82.556,88.322,39.317)
O5': (80.889,87.698,41.796)
O4': (83.172,86.595,40.850)
C5': (82.061,88.498,41.822)
P: (80.401,86.964,43.114)
C4': (83.008,88.045,40.749)
C2': (81.940,86.990,38.909)
O2': (81.925,86.784,37.511)
N1: (82.377,84.640,39.785)
O4: (81.113,80.826,39.853)
O2: (84.500,83.812,40.014)
C6: (81.026,84.365,39.771)
C5: (80.541,83.126,39.833)
O3': (83.726,88.583,38.549)
Image (generated by PyMOL):
PyMOL image
show in jmol