ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:A12:A17

Extra

PDB:
ATOM 1 O3' U A 11 -17.305 21.860 67.579 1.00 72.76 O
ATOM 2 P A A 12 -17.510 22.068 69.158 1.00 74.36 P
ATOM 3 OP1 A A 12 -18.547 21.100 69.565 1.00 73.45 O
ATOM 4 OP2 A A 12 -17.701 23.513 69.441 1.00 72.68 O
ATOM 5 O5' A A 12 -16.133 21.590 69.797 1.00 76.15 O
ATOM 6 C5' A A 12 -15.971 20.254 70.263 1.00 80.22 C
ATOM 7 C4' A A 12 -15.731 20.261 71.749 1.00 83.46 C
ATOM 8 O4' A A 12 -14.414 20.806 71.974 1.00 83.69 O
ATOM 9 C3' A A 12 -16.675 21.184 72.518 1.00 85.91 C
ATOM 10 O3' A A 12 -17.914 20.556 72.906 1.00 87.87 O
ATOM 11 C2' A A 12 -15.818 21.829 73.620 1.00 85.51 C
ATOM 12 O2' A A 12 -16.107 21.444 74.949 1.00 86.56 O
ATOM 13 C1' A A 12 -14.387 21.437 73.233 1.00 84.72 C
ATOM 14 N9 A A 12 -13.487 22.587 73.160 1.00 83.53 N
ATOM 15 C8 A A 12 -13.776 23.872 72.768 1.00 82.92 C
ATOM 16 N7 A A 12 -12.765 24.696 72.874 1.00 82.37 N
ATOM 17 C5 A A 12 -11.735 23.898 73.358 1.00 83.50 C
ATOM 18 C6 A A 12 -10.399 24.177 73.701 1.00 84.07 C
ATOM 19 N6 A A 12 -9.855 25.395 73.624 1.00 85.24 N
ATOM 20 N1 A A 12 -9.634 23.151 74.139 1.00 83.45 N
ATOM 21 C2 A A 12 -10.186 21.936 74.234 1.00 83.32 C
ATOM 22 N3 A A 12 -11.430 21.552 73.955 1.00 83.67 N
ATOM 23 C4 A A 12 -12.161 22.593 73.518 1.00 83.42 C
ATOM 24 P A A 13 -17.976 19.507 74.134 1.00 88.89 P
ATOM 25 OP1 A A 13 -16.620 19.050 74.536 1.00 88.89 O
ATOM 26 OP2 A A 13 -18.998 18.501 73.756 1.00 89.39 O
ATOM 27 O5' A A 13 -18.566 20.387 75.314 1.00 88.88 O
TER

ATOM 1 O3' G B 16 -9.536 29.659 74.347 1.00 71.64 O
ATOM 2 P U B 17 -9.841 29.732 72.773 1.00 75.29 P
ATOM 3 OP1 U B 17 -10.896 30.747 72.545 1.00 74.13 O
ATOM 4 OP2 U B 17 -10.045 28.347 72.291 1.00 75.45 O
ATOM 5 O5' U B 17 -8.478 30.266 72.138 1.00 78.88 O
ATOM 6 C5' U B 17 -8.001 31.590 72.399 1.00 84.21 C
ATOM 7 C4' U B 17 -6.671 31.537 73.125 1.00 87.36 C
ATOM 8 O4' U B 17 -6.874 30.864 74.406 1.00 92.07 O
ATOM 9 C3' U B 17 -5.588 30.677 72.493 1.00 87.49 C
ATOM 10 O3' U B 17 -4.851 31.276 71.460 1.00 83.08 O
ATOM 11 C2' U B 17 -4.684 30.427 73.679 1.00 90.65 C
ATOM 12 O2' U B 17 -3.971 31.589 74.065 1.00 91.21 O
ATOM 13 C1' U B 17 -5.734 30.059 74.718 1.00 94.03 C
ATOM 14 N1 U B 17 -6.098 28.632 74.613 1.00 98.01 N
ATOM 15 C2 U B 17 -5.611 27.772 75.590 1.00 99.81 C
ATOM 16 O2 U B 17 -4.936 28.154 76.531 1.00 99.86 O
ATOM 17 N3 U B 17 -5.946 26.447 75.423 1.00101.21 N
ATOM 18 C4 U B 17 -6.707 25.898 74.406 1.00101.59 C
ATOM 19 O4 U B 17 -6.922 24.682 74.399 1.00101.64 O
ATOM 20 C5 U B 17 -7.186 26.848 73.439 1.00101.34 C
ATOM 21 C6 U B 17 -6.878 28.149 73.574 1.00 99.76 C
ATOM 22 P A B 18 -3.932 30.345 70.538 1.00 81.25 P
ATOM 23 OP1 A B 18 -3.088 31.243 69.704 1.00 80.29 O
ATOM 24 OP2 A B 18 -4.832 29.356 69.885 1.00 80.09 O
ATOM 25 O5' A B 18 -2.994 29.564 71.567 1.00 79.28 O
TER

Atoms:
OP1: (-18.547,21.100,69.565)
OP2: (-17.701,23.513,69.441)
C3': (-16.675,21.184,72.518)
C1': (-14.387,21.437,73.233)
C5': (-15.971,20.254,70.263)
O4': (-14.414,20.806,71.974)
C8: (-13.776,23.872,72.768)
O2': (-16.107,21.444,74.949)
C6: (-10.399,24.177,73.701)
C5: (-11.735,23.898,73.358)
C4: (-12.161,22.593,73.518)
P: (-17.510,22.068,69.158)
C4': (-15.731,20.261,71.749)
C2': (-15.818,21.829,73.620)
C2: (-10.186,21.936,74.234)
N1: (-9.634,23.151,74.139)
N3: (-11.430,21.552,73.955)
N6: (-9.855,25.395,73.624)
N7: (-12.765,24.696,72.874)
N9: (-13.487,22.587,73.160)
O5': (-16.133,21.590,69.797)
O3': (-17.914,20.556,72.906)
C4: (-6.707,25.898,74.406)
N3: (-5.946,26.447,75.423)
OP1: (-10.896,30.747,72.545)
OP2: (-10.045,28.347,72.291)
C2: (-5.611,27.772,75.590)
C1': (-5.734,30.059,74.718)
C3': (-5.588,30.677,72.493)
O5': (-8.478,30.266,72.138)
O4': (-6.874,30.864,74.406)
C5': (-8.001,31.590,72.399)
P: (-9.841,29.732,72.773)
C4': (-6.671,31.537,73.125)
C2': (-4.684,30.427,73.679)
O2': (-3.971,31.589,74.065)
N1: (-6.098,28.632,74.613)
O4: (-6.922,24.682,74.399)
O2: (-4.936,28.154,76.531)
C6: (-6.878,28.149,73.574)
C5: (-7.186,26.848,73.439)
O3': (-4.851,31.276,71.460)
Image (generated by PyMOL):
PyMOL image
show in jmol