ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1084:A2396

Extra

PDB:
ATOM 1 O3' A A1083 100.952 -69.654 15.906 1.00 58.61 O
ATOM 2 P A A1084 99.445 -70.262 15.769 1.00 67.16 P
ATOM 3 OP1 A A1084 99.172 -71.157 16.947 1.00 60.37 O
ATOM 4 OP2 A A1084 99.340 -70.791 14.381 1.00 63.34 O
ATOM 5 O5' A A1084 98.397 -69.061 15.845 1.00 58.27 O
ATOM 6 C5' A A1084 97.154 -69.174 15.162 1.00 49.89 C
ATOM 7 C4' A A1084 96.030 -68.696 16.033 1.00 45.83 C
ATOM 8 O4' A A1084 96.353 -67.349 16.456 1.00 42.09 O
ATOM 9 C3' A A1084 94.705 -68.634 15.276 1.00 49.16 C
ATOM 10 O3' A A1084 93.558 -69.284 15.797 1.00 45.01 O
ATOM 11 C2' A A1084 94.478 -67.161 14.969 1.00 53.89 C
ATOM 12 O2' A A1084 93.124 -66.754 15.113 1.00 48.04 O
ATOM 13 C1' A A1084 95.402 -66.432 15.954 1.00 47.46 C
ATOM 14 N9 A A1084 96.113 -65.355 15.247 1.00 43.99 N
ATOM 15 C8 A A1084 96.549 -65.370 13.935 1.00 43.81 C
ATOM 16 N7 A A1084 97.066 -64.236 13.532 1.00 39.43 N
ATOM 17 C5 A A1084 96.996 -63.425 14.653 1.00 39.69 C
ATOM 18 C6 A A1084 97.391 -62.102 14.876 1.00 43.39 C
ATOM 19 N6 A A1084 97.941 -61.332 13.941 1.00 45.25 N
ATOM 20 N1 A A1084 97.196 -61.585 16.104 1.00 43.79 N
ATOM 21 C2 A A1084 96.637 -62.353 17.041 1.00 49.50 C
ATOM 22 N3 A A1084 96.218 -63.617 16.960 1.00 48.65 N
ATOM 23 C4 A A1084 96.429 -64.103 15.724 1.00 42.50 C
ATOM 24 P U A1085 92.454 -69.823 14.741 1.00 44.52 P
ATOM 25 OP1 U A1085 93.164 -70.048 13.459 1.00 36.41 O
ATOM 26 OP2 U A1085 91.344 -68.858 14.785 1.00 48.25 O
ATOM 27 O5' U A1085 91.909 -71.213 15.335 1.00 40.58 O
TER

ATOM 1 O3' G B2395 99.291 -62.022 8.346 1.00 51.61 O
ATOM 2 P U B2396 98.015 -61.659 9.281 1.00 50.59 P
ATOM 3 OP1 U B2396 98.137 -62.291 10.631 1.00 43.96 O
ATOM 4 OP2 U B2396 96.843 -61.992 8.430 1.00 53.64 O
ATOM 5 O5' U B2396 98.059 -60.065 9.456 1.00 52.56 O
ATOM 6 C5' U B2396 97.003 -59.249 8.957 1.00 49.90 C
ATOM 7 C4' U B2396 96.769 -58.037 9.843 1.00 51.52 C
ATOM 8 O4' U B2396 97.397 -58.175 11.151 1.00 54.60 O
ATOM 9 C3' U B2396 97.323 -56.704 9.349 1.00 51.14 C
ATOM 10 O3' U B2396 96.500 -56.129 8.337 1.00 52.02 O
ATOM 11 C2' U B2396 97.290 -55.847 10.613 1.00 50.93 C
ATOM 12 O2' U B2396 96.011 -55.357 10.905 1.00 47.49 O
ATOM 13 C1' U B2396 97.569 -56.874 11.710 1.00 54.17 C
ATOM 14 N1 U B2396 98.882 -56.680 12.367 1.00 59.42 N
ATOM 15 C2 U B2396 98.975 -55.615 13.276 1.00 64.35 C
ATOM 16 O2 U B2396 98.037 -54.902 13.571 1.00 68.34 O
ATOM 17 N3 U B2396 100.207 -55.407 13.821 1.00 63.63 N
ATOM 18 C4 U B2396 101.354 -56.104 13.564 1.00 67.89 C
ATOM 19 O4 U B2396 102.432 -55.656 13.978 1.00 68.91 O
ATOM 20 C5 U B2396 101.192 -57.199 12.654 1.00 60.93 C
ATOM 21 C6 U B2396 99.990 -57.447 12.101 1.00 56.00 C
ATOM 22 P U B2397 97.179 -55.432 7.066 1.00 49.17 P
ATOM 23 OP1 U B2397 96.130 -55.022 6.083 1.00 50.26 O
ATOM 24 OP2 U B2397 98.294 -56.311 6.619 1.00 43.64 O
ATOM 25 O5' U B2397 97.851 -54.132 7.676 1.00 49.81 O
TER

Atoms:
OP1: (99.172,-71.157,16.947)
OP2: (99.340,-70.791,14.381)
C3': (94.705,-68.634,15.276)
C1': (95.402,-66.432,15.954)
C5': (97.154,-69.174,15.162)
O4': (96.353,-67.349,16.456)
C8: (96.549,-65.370,13.935)
O2': (93.124,-66.754,15.113)
C6: (97.391,-62.102,14.876)
C5: (96.996,-63.425,14.653)
C4: (96.429,-64.103,15.724)
P: (99.445,-70.262,15.769)
C4': (96.030,-68.696,16.033)
C2': (94.478,-67.161,14.969)
C2: (96.637,-62.353,17.041)
N1: (97.196,-61.585,16.104)
N3: (96.218,-63.617,16.960)
N6: (97.941,-61.332,13.941)
N7: (97.066,-64.236,13.532)
N9: (96.113,-65.355,15.247)
O5': (98.397,-69.061,15.845)
O3': (93.558,-69.284,15.797)
C4: (101.354,-56.104,13.564)
N3: (100.207,-55.407,13.821)
OP1: (98.137,-62.291,10.631)
OP2: (96.843,-61.992,8.430)
C2: (98.975,-55.615,13.276)
C1': (97.569,-56.874,11.710)
C3': (97.323,-56.704,9.349)
O5': (98.059,-60.065,9.456)
O4': (97.397,-58.175,11.151)
C5': (97.003,-59.249,8.957)
P: (98.015,-61.659,9.281)
C4': (96.769,-58.037,9.843)
C2': (97.290,-55.847,10.613)
O2': (96.011,-55.357,10.905)
N1: (98.882,-56.680,12.367)
O4: (102.432,-55.656,13.978)
O2: (98.037,-54.902,13.571)
C6: (99.990,-57.447,12.101)
C5: (101.192,-57.199,12.654)
O3': (96.500,-56.129,8.337)
Image (generated by PyMOL):
PyMOL image
show in jmol