Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01306:01305
Extra
PDB:
ATOM 1 O3' U A1305 14.592 109.580 56.374 1.00 43.77 O
ATOM 2 P U A1306 15.991 108.814 56.522 1.00 44.32 P
ATOM 3 OP1 U A1306 15.736 107.554 57.265 1.00 46.07 O
ATOM 4 OP2 U A1306 16.990 109.786 57.037 1.00 45.20 O
ATOM 5 O5' U A1306 16.406 108.446 55.035 1.00 42.30 O
ATOM 6 C5' U A1306 15.705 107.446 54.302 1.00 41.00 C
ATOM 7 C4' U A1306 16.237 107.381 52.897 1.00 42.71 C
ATOM 8 O4' U A1306 16.033 108.671 52.262 1.00 44.02 O
ATOM 9 C3' U A1306 17.734 107.170 52.763 1.00 43.27 C
ATOM 10 O3' U A1306 18.137 105.824 52.907 1.00 42.75 O
ATOM 11 C2' U A1306 18.007 107.693 51.365 1.00 44.63 C
ATOM 12 O2' U A1306 17.642 106.782 50.347 1.00 45.49 O
ATOM 13 C1' U A1306 17.081 108.908 51.331 1.00 44.80 C
ATOM 14 N1 U A1306 17.779 110.151 51.695 1.00 44.41 N
ATOM 15 C2 U A1306 18.493 110.786 50.696 1.00 44.73 C
ATOM 16 O2 U A1306 18.594 110.337 49.563 1.00 47.36 O
ATOM 17 N3 U A1306 19.095 111.959 51.069 1.00 44.25 N
ATOM 18 C4 U A1306 19.075 112.543 52.312 1.00 44.02 C
ATOM 19 O4 U A1306 19.659 113.615 52.483 1.00 43.73 O
ATOM 20 C5 U A1306 18.333 111.816 53.300 1.00 44.43 C
ATOM 21 C6 U A1306 17.725 110.674 52.966 1.00 42.98 C
ATOM 22 P A A1307 19.581 105.505 53.529 1.00 44.63 P
ATOM 23 OP1 A A1307 19.657 104.041 53.766 1.00 46.40 O
ATOM 24 OP2 A A1307 19.810 106.448 54.651 1.00 40.32 O
ATOM 25 O5' A A1307 20.598 105.858 52.359 1.00 43.67 O
TER
ATOM 1 O3' A B1304 14.310 115.327 58.488 1.00 41.63 O
ATOM 2 P U B1305 15.348 114.107 58.522 1.00 43.21 P
ATOM 3 OP1 U B1305 15.169 113.423 59.826 1.00 44.08 O
ATOM 4 OP2 U B1305 16.693 114.590 58.126 1.00 42.77 O
ATOM 5 O5' U B1305 14.858 113.150 57.350 1.00 44.26 O
ATOM 6 C5' U B1305 13.615 112.433 57.445 1.00 43.19 C
ATOM 7 C4' U B1305 13.370 111.665 56.174 1.00 43.21 C
ATOM 8 O4' U B1305 13.148 112.593 55.080 1.00 43.40 O
ATOM 9 C3' U B1305 14.544 110.825 55.705 1.00 43.01 C
ATOM 10 O3' U B1305 14.592 109.580 56.374 1.00 43.77 O
ATOM 11 C2' U B1305 14.260 110.680 54.218 1.00 43.24 C
ATOM 12 O2' U B1305 13.260 109.717 53.959 1.00 41.67 O
ATOM 13 C1' U B1305 13.720 112.071 53.889 1.00 43.26 C
ATOM 14 N1 U B1305 14.754 113.009 53.421 1.00 44.29 N
ATOM 15 C2 U B1305 15.106 112.974 52.077 1.00 43.99 C
ATOM 16 O2 U B1305 14.626 112.184 51.283 1.00 44.49 O
ATOM 17 N3 U B1305 16.051 113.898 51.704 1.00 43.06 N
ATOM 18 C4 U B1305 16.674 114.823 52.516 1.00 43.03 C
ATOM 19 O4 U B1305 17.483 115.603 52.028 1.00 44.12 O
ATOM 20 C5 U B1305 16.276 114.785 53.886 1.00 43.58 C
ATOM 21 C6 U B1305 15.353 113.904 54.284 1.00 44.66 C
ATOM 22 P U B1306 15.991 108.814 56.522 1.00 44.32 P
ATOM 23 OP1 U B1306 15.736 107.554 57.265 1.00 46.07 O
ATOM 24 OP2 U B1306 16.990 109.786 57.037 1.00 45.20 O
ATOM 25 O5' U B1306 16.406 108.446 55.035 1.00 42.30 O
TER
ATOM 2 P U A1306 15.991 108.814 56.522 1.00 44.32 P
ATOM 3 OP1 U A1306 15.736 107.554 57.265 1.00 46.07 O
ATOM 4 OP2 U A1306 16.990 109.786 57.037 1.00 45.20 O
ATOM 5 O5' U A1306 16.406 108.446 55.035 1.00 42.30 O
ATOM 6 C5' U A1306 15.705 107.446 54.302 1.00 41.00 C
ATOM 7 C4' U A1306 16.237 107.381 52.897 1.00 42.71 C
ATOM 8 O4' U A1306 16.033 108.671 52.262 1.00 44.02 O
ATOM 9 C3' U A1306 17.734 107.170 52.763 1.00 43.27 C
ATOM 10 O3' U A1306 18.137 105.824 52.907 1.00 42.75 O
ATOM 11 C2' U A1306 18.007 107.693 51.365 1.00 44.63 C
ATOM 12 O2' U A1306 17.642 106.782 50.347 1.00 45.49 O
ATOM 13 C1' U A1306 17.081 108.908 51.331 1.00 44.80 C
ATOM 14 N1 U A1306 17.779 110.151 51.695 1.00 44.41 N
ATOM 15 C2 U A1306 18.493 110.786 50.696 1.00 44.73 C
ATOM 16 O2 U A1306 18.594 110.337 49.563 1.00 47.36 O
ATOM 17 N3 U A1306 19.095 111.959 51.069 1.00 44.25 N
ATOM 18 C4 U A1306 19.075 112.543 52.312 1.00 44.02 C
ATOM 19 O4 U A1306 19.659 113.615 52.483 1.00 43.73 O
ATOM 20 C5 U A1306 18.333 111.816 53.300 1.00 44.43 C
ATOM 21 C6 U A1306 17.725 110.674 52.966 1.00 42.98 C
ATOM 22 P A A1307 19.581 105.505 53.529 1.00 44.63 P
ATOM 23 OP1 A A1307 19.657 104.041 53.766 1.00 46.40 O
ATOM 24 OP2 A A1307 19.810 106.448 54.651 1.00 40.32 O
ATOM 25 O5' A A1307 20.598 105.858 52.359 1.00 43.67 O
TER
ATOM 1 O3' A B1304 14.310 115.327 58.488 1.00 41.63 O
ATOM 2 P U B1305 15.348 114.107 58.522 1.00 43.21 P
ATOM 3 OP1 U B1305 15.169 113.423 59.826 1.00 44.08 O
ATOM 4 OP2 U B1305 16.693 114.590 58.126 1.00 42.77 O
ATOM 5 O5' U B1305 14.858 113.150 57.350 1.00 44.26 O
ATOM 6 C5' U B1305 13.615 112.433 57.445 1.00 43.19 C
ATOM 7 C4' U B1305 13.370 111.665 56.174 1.00 43.21 C
ATOM 8 O4' U B1305 13.148 112.593 55.080 1.00 43.40 O
ATOM 9 C3' U B1305 14.544 110.825 55.705 1.00 43.01 C
ATOM 10 O3' U B1305 14.592 109.580 56.374 1.00 43.77 O
ATOM 11 C2' U B1305 14.260 110.680 54.218 1.00 43.24 C
ATOM 12 O2' U B1305 13.260 109.717 53.959 1.00 41.67 O
ATOM 13 C1' U B1305 13.720 112.071 53.889 1.00 43.26 C
ATOM 14 N1 U B1305 14.754 113.009 53.421 1.00 44.29 N
ATOM 15 C2 U B1305 15.106 112.974 52.077 1.00 43.99 C
ATOM 16 O2 U B1305 14.626 112.184 51.283 1.00 44.49 O
ATOM 17 N3 U B1305 16.051 113.898 51.704 1.00 43.06 N
ATOM 18 C4 U B1305 16.674 114.823 52.516 1.00 43.03 C
ATOM 19 O4 U B1305 17.483 115.603 52.028 1.00 44.12 O
ATOM 20 C5 U B1305 16.276 114.785 53.886 1.00 43.58 C
ATOM 21 C6 U B1305 15.353 113.904 54.284 1.00 44.66 C
ATOM 22 P U B1306 15.991 108.814 56.522 1.00 44.32 P
ATOM 23 OP1 U B1306 15.736 107.554 57.265 1.00 46.07 O
ATOM 24 OP2 U B1306 16.990 109.786 57.037 1.00 45.20 O
ATOM 25 O5' U B1306 16.406 108.446 55.035 1.00 42.30 O
TER
Atoms:
C4: (19.075,112.543,52.312)
N3: (19.095,111.959,51.069)
OP1: (15.736,107.554,57.265)
OP2: (16.990,109.786,57.037)
C2: (18.493,110.786,50.696)
C1': (17.081,108.908,51.331)
C3': (17.734,107.170,52.763)
O5': (16.406,108.446,55.035)
O4': (16.033,108.671,52.262)
C5': (15.705,107.446,54.302)
P: (15.991,108.814,56.522)
C4': (16.237,107.381,52.897)
C2': (18.007,107.693,51.365)
O2': (17.642,106.782,50.347)
N1: (17.779,110.151,51.695)
O4: (19.659,113.615,52.483)
O2: (18.594,110.337,49.563)
C6: (17.725,110.674,52.966)
C5: (18.333,111.816,53.300)
O3': (18.137,105.824,52.907)
N3: (19.095,111.959,51.069)
OP1: (15.736,107.554,57.265)
OP2: (16.990,109.786,57.037)
C2: (18.493,110.786,50.696)
C1': (17.081,108.908,51.331)
C3': (17.734,107.170,52.763)
O5': (16.406,108.446,55.035)
O4': (16.033,108.671,52.262)
C5': (15.705,107.446,54.302)
P: (15.991,108.814,56.522)
C4': (16.237,107.381,52.897)
C2': (18.007,107.693,51.365)
O2': (17.642,106.782,50.347)
N1: (17.779,110.151,51.695)
O4: (19.659,113.615,52.483)
O2: (18.594,110.337,49.563)
C6: (17.725,110.674,52.966)
C5: (18.333,111.816,53.300)
O3': (18.137,105.824,52.907)
C4: (16.674,114.823,52.516)
N3: (16.051,113.898,51.704)
OP1: (15.169,113.423,59.826)
OP2: (16.693,114.590,58.126)
C2: (15.106,112.974,52.077)
C1': (13.720,112.071,53.889)
C3': (14.544,110.825,55.705)
O5': (14.858,113.150,57.350)
O4': (13.148,112.593,55.080)
C5': (13.615,112.433,57.445)
P: (15.348,114.107,58.522)
C4': (13.370,111.665,56.174)
C2': (14.260,110.680,54.218)
O2': (13.260,109.717,53.959)
N1: (14.754,113.009,53.421)
O4: (17.483,115.603,52.028)
O2: (14.626,112.184,51.283)
C6: (15.353,113.904,54.284)
C5: (16.276,114.785,53.886)
O3': (14.592,109.580,56.374)
N3: (16.051,113.898,51.704)
OP1: (15.169,113.423,59.826)
OP2: (16.693,114.590,58.126)
C2: (15.106,112.974,52.077)
C1': (13.720,112.071,53.889)
C3': (14.544,110.825,55.705)
O5': (14.858,113.150,57.350)
O4': (13.148,112.593,55.080)
C5': (13.615,112.433,57.445)
P: (15.348,114.107,58.522)
C4': (13.370,111.665,56.174)
C2': (14.260,110.680,54.218)
O2': (13.260,109.717,53.959)
N1: (14.754,113.009,53.421)
O4: (17.483,115.603,52.028)
O2: (14.626,112.184,51.283)
C6: (15.353,113.904,54.284)
C5: (16.276,114.785,53.886)
O3': (14.592,109.580,56.374)
Image (generated by PyMOL):