ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:92:924

Extra

PDB:
ATOM 1 O3' U A 1 53.986 11.569 102.957 1.00 98.57 O
ATOM 2 P A A 2 54.130 12.411 101.593 1.00 94.29 P
ATOM 3 OP1 A A 2 52.824 13.060 101.290 1.00 93.81 O
ATOM 4 OP2 A A 2 54.762 11.532 100.572 1.00 93.99 O
ATOM 5 O5' A A 2 55.183 13.545 101.964 1.00 88.89 O
ATOM 6 C5' A A 2 54.783 14.749 102.645 1.00 79.41 C
ATOM 7 C4' A A 2 56.005 15.504 103.104 1.00 73.26 C
ATOM 8 O4' A A 2 56.650 14.768 104.171 1.00 72.62 O
ATOM 9 C3' A A 2 57.080 15.688 102.043 1.00 70.29 C
ATOM 10 O3' A A 2 57.854 16.858 102.293 1.00 64.27 O
ATOM 11 C2' A A 2 57.893 14.400 102.173 1.00 70.31 C
ATOM 12 O2' A A 2 59.237 14.517 101.747 1.00 71.11 O
ATOM 13 C1' A A 2 57.787 14.086 103.670 1.00 70.83 C
ATOM 14 N9 A A 2 57.602 12.656 103.945 1.00 70.33 N
ATOM 15 C8 A A 2 57.349 11.646 103.047 1.00 69.21 C
ATOM 16 N7 A A 2 57.248 10.461 103.594 1.00 69.49 N
ATOM 17 C5 A A 2 57.439 10.702 104.947 1.00 69.85 C
ATOM 18 C6 A A 2 57.449 9.850 106.063 1.00 70.48 C
ATOM 19 N6 A A 2 57.269 8.530 105.985 1.00 71.06 N
ATOM 20 N1 A A 2 57.657 10.406 107.278 1.00 71.14 N
ATOM 21 C2 A A 2 57.848 11.729 107.352 1.00 70.77 C
ATOM 22 N3 A A 2 57.868 12.634 106.374 1.00 70.82 N
ATOM 23 C4 A A 2 57.653 12.049 105.180 1.00 70.26 C
ATOM 24 P G A 3 57.792 18.091 101.259 1.00 59.15 P
ATOM 25 OP1 G A 3 59.060 18.849 101.399 1.00 60.25 O
ATOM 26 OP2 G A 3 56.497 18.781 101.495 1.00 58.64 O
ATOM 27 O5' G A 3 57.774 17.424 99.805 1.00 54.37 O
TER

ATOM 1 O3' U B 23 61.714 0.829 99.691 1.00102.42 O
ATOM 2 P G B 24 61.897 2.263 98.985 1.00 99.87 P
ATOM 3 OP1 G B 24 62.623 2.039 97.699 1.00 99.01 O
ATOM 4 OP2 G B 24 62.463 3.201 99.995 1.00 99.03 O
ATOM 5 O5' G B 24 60.405 2.727 98.656 1.00 94.78 O
ATOM 6 C5' G B 24 59.763 2.384 97.404 1.00 85.88 C
ATOM 7 C4' G B 24 58.649 3.365 97.103 1.00 79.24 C
ATOM 8 O4' G B 24 57.658 3.288 98.161 1.00 77.81 O
ATOM 9 C3' G B 24 59.072 4.826 97.091 1.00 76.31 C
ATOM 10 O3' G B 24 59.599 5.217 95.830 1.00 72.98 O
ATOM 11 C2' G B 24 57.781 5.547 97.447 1.00 75.23 C
ATOM 12 O2' G B 24 56.892 5.665 96.356 1.00 74.40 O
ATOM 13 C1' G B 24 57.191 4.589 98.482 1.00 75.04 C
ATOM 14 N9 G B 24 57.603 4.897 99.852 1.00 73.39 N
ATOM 15 C8 G B 24 58.398 4.132 100.678 1.00 71.93 C
ATOM 16 N7 G B 24 58.588 4.672 101.852 1.00 71.01 N
ATOM 17 C5 G B 24 57.878 5.866 101.800 1.00 70.90 C
ATOM 18 C6 G B 24 57.714 6.887 102.779 1.00 70.61 C
ATOM 19 O6 G B 24 58.176 6.939 103.927 1.00 68.69 O
ATOM 20 N1 G B 24 56.920 7.926 102.302 1.00 70.06 N
ATOM 21 C2 G B 24 56.362 7.983 101.049 1.00 70.68 C
ATOM 22 N2 G B 24 55.642 9.078 100.771 1.00 71.02 N
ATOM 23 N3 G B 24 56.502 7.041 100.133 1.00 71.04 N
ATOM 24 C4 G B 24 57.267 6.020 100.572 1.00 71.54 C
ATOM 25 P C B 25 60.825 6.257 95.767 1.00 69.52 P
ATOM 26 OP1 C B 25 61.089 6.485 94.317 1.00 67.31 O
ATOM 27 OP2 C B 25 61.922 5.771 96.653 1.00 68.06 O
ATOM 28 O5' C B 25 60.229 7.591 96.403 1.00 65.76 O
TER

Atoms:
OP1: (52.824,13.060,101.290)
OP2: (54.762,11.532,100.572)
C3': (57.080,15.688,102.043)
C1': (57.787,14.086,103.670)
C5': (54.783,14.749,102.645)
O4': (56.650,14.768,104.171)
C8: (57.349,11.646,103.047)
O2': (59.237,14.517,101.747)
C6: (57.449,9.850,106.063)
C5: (57.439,10.702,104.947)
C4: (57.653,12.049,105.180)
P: (54.130,12.411,101.593)
C4': (56.005,15.504,103.104)
C2': (57.893,14.400,102.173)
C2: (57.848,11.729,107.352)
N1: (57.657,10.406,107.278)
N3: (57.868,12.634,106.374)
N6: (57.269,8.530,105.985)
N7: (57.248,10.461,103.594)
N9: (57.602,12.656,103.945)
O5': (55.183,13.545,101.964)
O3': (57.854,16.858,102.293)
OP1: (62.623,2.039,97.699)
OP2: (62.463,3.201,99.995)
C3': (59.072,4.826,97.091)
C1': (57.191,4.589,98.482)
C5': (59.763,2.384,97.404)
O6: (58.176,6.939,103.927)
O4': (57.658,3.288,98.161)
C8: (58.398,4.132,100.678)
C2: (56.362,7.983,101.049)
C6: (57.714,6.887,102.779)
C5: (57.878,5.866,101.800)
C4: (57.267,6.020,100.572)
P: (61.897,2.263,98.985)
C4': (58.649,3.365,97.103)
C2': (57.781,5.547,97.447)
O2': (56.892,5.665,96.356)
N1: (56.920,7.926,102.302)
N2: (55.642,9.078,100.771)
N3: (56.502,7.041,100.133)
N7: (58.588,4.672,101.852)
N9: (57.603,4.897,99.852)
O5': (60.405,2.727,98.656)
O3': (59.599,5.217,95.830)
Image (generated by PyMOL):
PyMOL image
show in jmol