Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11276:11275
Extra
PDB:
ATOM 1 O3' U A1275 69.671 -10.180 35.697 1.00 31.71 O
ATOM 2 P A A1276 70.517 -11.273 34.909 1.00 33.52 P
ATOM 3 OP1 A A1276 70.839 -12.320 35.890 1.00 33.42 O
ATOM 4 OP2 A A1276 71.625 -10.592 34.202 1.00 33.74 O
ATOM 5 O5' A A1276 69.469 -11.849 33.868 1.00 33.61 O
ATOM 6 C5' A A1276 68.573 -12.886 34.249 1.00 33.50 C
ATOM 7 C4' A A1276 68.154 -13.688 33.071 1.00 33.72 C
ATOM 8 O4' A A1276 67.355 -12.858 32.202 1.00 33.77 O
ATOM 9 C3' A A1276 69.290 -14.224 32.230 1.00 34.02 C
ATOM 10 O3' A A1276 69.663 -15.551 32.652 1.00 34.05 O
ATOM 11 C2' A A1276 68.768 -14.131 30.797 1.00 34.24 C
ATOM 12 O2' A A1276 68.038 -15.296 30.471 1.00 34.31 O
ATOM 13 C1' A A1276 67.779 -12.957 30.883 1.00 34.07 C
ATOM 14 N9 A A1276 68.356 -11.642 30.537 1.00 34.14 N
ATOM 15 C8 A A1276 68.370 -10.627 31.469 1.00 33.92 C
ATOM 16 N7 A A1276 68.849 -9.518 31.030 1.00 34.02 N
ATOM 17 C5 A A1276 69.167 -9.815 29.705 1.00 34.32 C
ATOM 18 C6 A A1276 69.736 -9.053 28.671 1.00 34.57 C
ATOM 19 N6 A A1276 70.127 -7.779 28.773 1.00 34.56 N
ATOM 20 N1 A A1276 69.903 -9.675 27.484 1.00 34.86 N
ATOM 21 C2 A A1276 69.528 -10.942 27.296 1.00 34.91 C
ATOM 22 N3 A A1276 68.977 -11.736 28.172 1.00 34.70 N
ATOM 23 C4 A A1276 68.832 -11.115 29.362 1.00 34.40 C
ATOM 24 P C A1277 71.096 -16.198 32.253 1.00 32.90 P
ATOM 25 OP1 C A1277 71.128 -17.558 32.808 1.00 32.89 O
ATOM 26 OP2 C A1277 72.147 -15.238 32.680 1.00 32.87 O
ATOM 27 O5' C A1277 71.013 -16.203 30.638 1.00 33.21 O
TER
ATOM 1 O3' A B1274 69.323 -5.063 32.365 1.00 38.23 O
ATOM 2 P U B1275 70.796 -5.695 32.319 1.00 32.36 P
ATOM 3 OP1 U B1275 71.698 -4.626 32.781 1.00 32.37 O
ATOM 4 OP2 U B1275 71.005 -6.278 30.974 1.00 32.64 O
ATOM 5 O5' U B1275 70.731 -6.871 33.373 1.00 32.16 O
ATOM 6 C5' U B1275 70.285 -6.669 34.687 1.00 31.88 C
ATOM 7 C4' U B1275 70.339 -7.950 35.461 1.00 31.77 C
ATOM 8 O4' U B1275 70.159 -7.657 36.853 1.00 31.52 O
ATOM 9 C3' U B1275 69.276 -8.959 35.139 1.00 31.74 C
ATOM 10 O3' U B1275 69.671 -10.180 35.697 1.00 31.71 O
ATOM 11 C2' U B1275 68.160 -8.459 36.019 1.00 31.47 C
ATOM 12 O2' U B1275 67.132 -9.406 36.216 1.00 31.36 O
ATOM 13 C1' U B1275 68.964 -8.206 37.299 1.00 31.33 C
ATOM 14 N1 U B1275 68.417 -7.235 38.209 1.00 31.13 N
ATOM 15 C2 U B1275 67.961 -7.563 39.481 1.00 30.90 C
ATOM 16 O2 U B1275 67.869 -8.714 39.865 1.00 30.85 O
ATOM 17 N3 U B1275 67.568 -6.502 40.274 1.00 30.74 N
ATOM 18 C4 U B1275 67.628 -5.165 39.864 1.00 30.80 C
ATOM 19 O4 U B1275 67.253 -4.237 40.607 1.00 30.67 O
ATOM 20 C5 U B1275 68.167 -4.939 38.549 1.00 31.05 C
ATOM 21 C6 U B1275 68.574 -5.952 37.792 1.00 31.20 C
ATOM 22 P A B1276 70.517 -11.273 34.909 1.00 33.52 P
ATOM 23 OP1 A B1276 70.839 -12.320 35.890 1.00 33.42 O
ATOM 24 OP2 A B1276 71.625 -10.592 34.202 1.00 33.74 O
ATOM 25 O5' A B1276 69.469 -11.849 33.868 1.00 33.61 O
TER
ATOM 2 P A A1276 70.517 -11.273 34.909 1.00 33.52 P
ATOM 3 OP1 A A1276 70.839 -12.320 35.890 1.00 33.42 O
ATOM 4 OP2 A A1276 71.625 -10.592 34.202 1.00 33.74 O
ATOM 5 O5' A A1276 69.469 -11.849 33.868 1.00 33.61 O
ATOM 6 C5' A A1276 68.573 -12.886 34.249 1.00 33.50 C
ATOM 7 C4' A A1276 68.154 -13.688 33.071 1.00 33.72 C
ATOM 8 O4' A A1276 67.355 -12.858 32.202 1.00 33.77 O
ATOM 9 C3' A A1276 69.290 -14.224 32.230 1.00 34.02 C
ATOM 10 O3' A A1276 69.663 -15.551 32.652 1.00 34.05 O
ATOM 11 C2' A A1276 68.768 -14.131 30.797 1.00 34.24 C
ATOM 12 O2' A A1276 68.038 -15.296 30.471 1.00 34.31 O
ATOM 13 C1' A A1276 67.779 -12.957 30.883 1.00 34.07 C
ATOM 14 N9 A A1276 68.356 -11.642 30.537 1.00 34.14 N
ATOM 15 C8 A A1276 68.370 -10.627 31.469 1.00 33.92 C
ATOM 16 N7 A A1276 68.849 -9.518 31.030 1.00 34.02 N
ATOM 17 C5 A A1276 69.167 -9.815 29.705 1.00 34.32 C
ATOM 18 C6 A A1276 69.736 -9.053 28.671 1.00 34.57 C
ATOM 19 N6 A A1276 70.127 -7.779 28.773 1.00 34.56 N
ATOM 20 N1 A A1276 69.903 -9.675 27.484 1.00 34.86 N
ATOM 21 C2 A A1276 69.528 -10.942 27.296 1.00 34.91 C
ATOM 22 N3 A A1276 68.977 -11.736 28.172 1.00 34.70 N
ATOM 23 C4 A A1276 68.832 -11.115 29.362 1.00 34.40 C
ATOM 24 P C A1277 71.096 -16.198 32.253 1.00 32.90 P
ATOM 25 OP1 C A1277 71.128 -17.558 32.808 1.00 32.89 O
ATOM 26 OP2 C A1277 72.147 -15.238 32.680 1.00 32.87 O
ATOM 27 O5' C A1277 71.013 -16.203 30.638 1.00 33.21 O
TER
ATOM 1 O3' A B1274 69.323 -5.063 32.365 1.00 38.23 O
ATOM 2 P U B1275 70.796 -5.695 32.319 1.00 32.36 P
ATOM 3 OP1 U B1275 71.698 -4.626 32.781 1.00 32.37 O
ATOM 4 OP2 U B1275 71.005 -6.278 30.974 1.00 32.64 O
ATOM 5 O5' U B1275 70.731 -6.871 33.373 1.00 32.16 O
ATOM 6 C5' U B1275 70.285 -6.669 34.687 1.00 31.88 C
ATOM 7 C4' U B1275 70.339 -7.950 35.461 1.00 31.77 C
ATOM 8 O4' U B1275 70.159 -7.657 36.853 1.00 31.52 O
ATOM 9 C3' U B1275 69.276 -8.959 35.139 1.00 31.74 C
ATOM 10 O3' U B1275 69.671 -10.180 35.697 1.00 31.71 O
ATOM 11 C2' U B1275 68.160 -8.459 36.019 1.00 31.47 C
ATOM 12 O2' U B1275 67.132 -9.406 36.216 1.00 31.36 O
ATOM 13 C1' U B1275 68.964 -8.206 37.299 1.00 31.33 C
ATOM 14 N1 U B1275 68.417 -7.235 38.209 1.00 31.13 N
ATOM 15 C2 U B1275 67.961 -7.563 39.481 1.00 30.90 C
ATOM 16 O2 U B1275 67.869 -8.714 39.865 1.00 30.85 O
ATOM 17 N3 U B1275 67.568 -6.502 40.274 1.00 30.74 N
ATOM 18 C4 U B1275 67.628 -5.165 39.864 1.00 30.80 C
ATOM 19 O4 U B1275 67.253 -4.237 40.607 1.00 30.67 O
ATOM 20 C5 U B1275 68.167 -4.939 38.549 1.00 31.05 C
ATOM 21 C6 U B1275 68.574 -5.952 37.792 1.00 31.20 C
ATOM 22 P A B1276 70.517 -11.273 34.909 1.00 33.52 P
ATOM 23 OP1 A B1276 70.839 -12.320 35.890 1.00 33.42 O
ATOM 24 OP2 A B1276 71.625 -10.592 34.202 1.00 33.74 O
ATOM 25 O5' A B1276 69.469 -11.849 33.868 1.00 33.61 O
TER
Atoms:
OP1: (70.839,-12.320,35.890)
OP2: (71.625,-10.592,34.202)
C3': (69.290,-14.224,32.230)
C1': (67.779,-12.957,30.883)
C5': (68.573,-12.886,34.249)
O4': (67.355,-12.858,32.202)
C8: (68.370,-10.627,31.469)
O2': (68.038,-15.296,30.471)
C6: (69.736,-9.053,28.671)
C5: (69.167,-9.815,29.705)
C4: (68.832,-11.115,29.362)
P: (70.517,-11.273,34.909)
C4': (68.154,-13.688,33.071)
C2': (68.768,-14.131,30.797)
C2: (69.528,-10.942,27.296)
N1: (69.903,-9.675,27.484)
N3: (68.977,-11.736,28.172)
N6: (70.127,-7.779,28.773)
N7: (68.849,-9.518,31.030)
N9: (68.356,-11.642,30.537)
O5': (69.469,-11.849,33.868)
O3': (69.663,-15.551,32.652)
OP2: (71.625,-10.592,34.202)
C3': (69.290,-14.224,32.230)
C1': (67.779,-12.957,30.883)
C5': (68.573,-12.886,34.249)
O4': (67.355,-12.858,32.202)
C8: (68.370,-10.627,31.469)
O2': (68.038,-15.296,30.471)
C6: (69.736,-9.053,28.671)
C5: (69.167,-9.815,29.705)
C4: (68.832,-11.115,29.362)
P: (70.517,-11.273,34.909)
C4': (68.154,-13.688,33.071)
C2': (68.768,-14.131,30.797)
C2: (69.528,-10.942,27.296)
N1: (69.903,-9.675,27.484)
N3: (68.977,-11.736,28.172)
N6: (70.127,-7.779,28.773)
N7: (68.849,-9.518,31.030)
N9: (68.356,-11.642,30.537)
O5': (69.469,-11.849,33.868)
O3': (69.663,-15.551,32.652)
C4: (67.628,-5.165,39.864)
N3: (67.568,-6.502,40.274)
OP1: (71.698,-4.626,32.781)
OP2: (71.005,-6.278,30.974)
C2: (67.961,-7.563,39.481)
C1': (68.964,-8.206,37.299)
C3': (69.276,-8.959,35.139)
O5': (70.731,-6.871,33.373)
O4': (70.159,-7.657,36.853)
C5': (70.285,-6.669,34.687)
P: (70.796,-5.695,32.319)
C4': (70.339,-7.950,35.461)
C2': (68.160,-8.459,36.019)
O2': (67.132,-9.406,36.216)
N1: (68.417,-7.235,38.209)
O4: (67.253,-4.237,40.607)
O2: (67.869,-8.714,39.865)
C6: (68.574,-5.952,37.792)
C5: (68.167,-4.939,38.549)
O3': (69.671,-10.180,35.697)
N3: (67.568,-6.502,40.274)
OP1: (71.698,-4.626,32.781)
OP2: (71.005,-6.278,30.974)
C2: (67.961,-7.563,39.481)
C1': (68.964,-8.206,37.299)
C3': (69.276,-8.959,35.139)
O5': (70.731,-6.871,33.373)
O4': (70.159,-7.657,36.853)
C5': (70.285,-6.669,34.687)
P: (70.796,-5.695,32.319)
C4': (70.339,-7.950,35.461)
C2': (68.160,-8.459,36.019)
O2': (67.132,-9.406,36.216)
N1: (68.417,-7.235,38.209)
O4: (67.253,-4.237,40.607)
O2: (67.869,-8.714,39.865)
C6: (68.574,-5.952,37.792)
C5: (68.167,-4.939,38.549)
O3': (69.671,-10.180,35.697)
Image (generated by PyMOL):