Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01306:01305
Extra
PDB:
ATOM 1 O3' U A1305 14.714 109.524 56.218 1.00 47.83 O
ATOM 2 P U A1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 3 OP1 U A1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 4 OP2 U A1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 5 O5' U A1306 16.595 108.403 54.983 1.00 48.19 O
ATOM 6 C5' U A1306 15.860 107.443 54.229 1.00 47.12 C
ATOM 7 C4' U A1306 16.371 107.399 52.818 1.00 47.90 C
ATOM 8 O4' U A1306 16.152 108.686 52.183 1.00 48.19 O
ATOM 9 C3' U A1306 17.865 107.189 52.682 1.00 47.34 C
ATOM 10 O3' U A1306 18.250 105.838 52.831 1.00 46.19 O
ATOM 11 C2' U A1306 18.142 107.732 51.289 1.00 49.43 C
ATOM 12 O2' U A1306 17.826 106.830 50.245 1.00 49.19 O
ATOM 13 C1' U A1306 17.197 108.936 51.255 1.00 49.59 C
ATOM 14 N1 U A1306 17.868 110.194 51.619 1.00 49.92 N
ATOM 15 C2 U A1306 18.607 110.830 50.635 1.00 51.18 C
ATOM 16 O2 U A1306 18.749 110.374 49.505 1.00 51.40 O
ATOM 17 N3 U A1306 19.184 112.013 51.020 1.00 51.24 N
ATOM 18 C4 U A1306 19.111 112.609 52.255 1.00 49.66 C
ATOM 19 O4 U A1306 19.632 113.713 52.424 1.00 48.50 O
ATOM 20 C5 U A1306 18.351 111.881 53.221 1.00 49.88 C
ATOM 21 C6 U A1306 17.768 110.730 52.879 1.00 48.93 C
ATOM 22 P A A1307 19.692 105.505 53.441 1.00 47.39 P
ATOM 23 OP1 A A1307 19.783 104.041 53.660 1.00 48.11 O
ATOM 24 OP2 A A1307 19.928 106.436 54.573 1.00 46.55 O
ATOM 25 O5' A A1307 20.691 105.884 52.268 1.00 45.47 O
TER
ATOM 1 O3' A B1304 14.326 115.254 58.356 1.00 46.48 O
ATOM 2 P U B1305 15.432 114.093 58.426 1.00 46.43 P
ATOM 3 OP1 U B1305 15.325 113.421 59.745 1.00 47.96 O
ATOM 4 OP2 U B1305 16.726 114.680 58.005 1.00 46.58 O
ATOM 5 O5' U B1305 14.993 113.061 57.297 1.00 46.75 O
ATOM 6 C5' U B1305 13.744 112.351 57.377 1.00 46.09 C
ATOM 7 C4' U B1305 13.492 111.609 56.091 1.00 45.71 C
ATOM 8 O4' U B1305 13.263 112.560 55.025 1.00 45.83 O
ATOM 9 C3' U B1305 14.669 110.790 55.599 1.00 46.14 C
ATOM 10 O3' U B1305 14.714 109.524 56.218 1.00 47.83 O
ATOM 11 C2' U B1305 14.404 110.683 54.109 1.00 45.28 C
ATOM 12 O2' U B1305 13.452 109.698 53.793 1.00 44.27 O
ATOM 13 C1' U B1305 13.818 112.062 53.817 1.00 46.35 C
ATOM 14 N1 U B1305 14.815 113.022 53.323 1.00 47.27 N
ATOM 15 C2 U B1305 15.167 112.946 51.988 1.00 48.15 C
ATOM 16 O2 U B1305 14.707 112.112 51.228 1.00 49.58 O
ATOM 17 N3 U B1305 16.081 113.882 51.577 1.00 47.79 N
ATOM 18 C4 U B1305 16.665 114.857 52.346 1.00 47.97 C
ATOM 19 O4 U B1305 17.459 115.635 51.830 1.00 48.62 O
ATOM 20 C5 U B1305 16.259 114.862 53.715 1.00 48.89 C
ATOM 21 C6 U B1305 15.372 113.967 54.146 1.00 47.46 C
ATOM 22 P U B1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 23 OP1 U B1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 24 OP2 U B1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 25 O5' U B1306 16.595 108.403 54.983 1.00 48.19 O
TER
ATOM 2 P U A1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 3 OP1 U A1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 4 OP2 U A1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 5 O5' U A1306 16.595 108.403 54.983 1.00 48.19 O
ATOM 6 C5' U A1306 15.860 107.443 54.229 1.00 47.12 C
ATOM 7 C4' U A1306 16.371 107.399 52.818 1.00 47.90 C
ATOM 8 O4' U A1306 16.152 108.686 52.183 1.00 48.19 O
ATOM 9 C3' U A1306 17.865 107.189 52.682 1.00 47.34 C
ATOM 10 O3' U A1306 18.250 105.838 52.831 1.00 46.19 O
ATOM 11 C2' U A1306 18.142 107.732 51.289 1.00 49.43 C
ATOM 12 O2' U A1306 17.826 106.830 50.245 1.00 49.19 O
ATOM 13 C1' U A1306 17.197 108.936 51.255 1.00 49.59 C
ATOM 14 N1 U A1306 17.868 110.194 51.619 1.00 49.92 N
ATOM 15 C2 U A1306 18.607 110.830 50.635 1.00 51.18 C
ATOM 16 O2 U A1306 18.749 110.374 49.505 1.00 51.40 O
ATOM 17 N3 U A1306 19.184 112.013 51.020 1.00 51.24 N
ATOM 18 C4 U A1306 19.111 112.609 52.255 1.00 49.66 C
ATOM 19 O4 U A1306 19.632 113.713 52.424 1.00 48.50 O
ATOM 20 C5 U A1306 18.351 111.881 53.221 1.00 49.88 C
ATOM 21 C6 U A1306 17.768 110.730 52.879 1.00 48.93 C
ATOM 22 P A A1307 19.692 105.505 53.441 1.00 47.39 P
ATOM 23 OP1 A A1307 19.783 104.041 53.660 1.00 48.11 O
ATOM 24 OP2 A A1307 19.928 106.436 54.573 1.00 46.55 O
ATOM 25 O5' A A1307 20.691 105.884 52.268 1.00 45.47 O
TER
ATOM 1 O3' A B1304 14.326 115.254 58.356 1.00 46.48 O
ATOM 2 P U B1305 15.432 114.093 58.426 1.00 46.43 P
ATOM 3 OP1 U B1305 15.325 113.421 59.745 1.00 47.96 O
ATOM 4 OP2 U B1305 16.726 114.680 58.005 1.00 46.58 O
ATOM 5 O5' U B1305 14.993 113.061 57.297 1.00 46.75 O
ATOM 6 C5' U B1305 13.744 112.351 57.377 1.00 46.09 C
ATOM 7 C4' U B1305 13.492 111.609 56.091 1.00 45.71 C
ATOM 8 O4' U B1305 13.263 112.560 55.025 1.00 45.83 O
ATOM 9 C3' U B1305 14.669 110.790 55.599 1.00 46.14 C
ATOM 10 O3' U B1305 14.714 109.524 56.218 1.00 47.83 O
ATOM 11 C2' U B1305 14.404 110.683 54.109 1.00 45.28 C
ATOM 12 O2' U B1305 13.452 109.698 53.793 1.00 44.27 O
ATOM 13 C1' U B1305 13.818 112.062 53.817 1.00 46.35 C
ATOM 14 N1 U B1305 14.815 113.022 53.323 1.00 47.27 N
ATOM 15 C2 U B1305 15.167 112.946 51.988 1.00 48.15 C
ATOM 16 O2 U B1305 14.707 112.112 51.228 1.00 49.58 O
ATOM 17 N3 U B1305 16.081 113.882 51.577 1.00 47.79 N
ATOM 18 C4 U B1305 16.665 114.857 52.346 1.00 47.97 C
ATOM 19 O4 U B1305 17.459 115.635 51.830 1.00 48.62 O
ATOM 20 C5 U B1305 16.259 114.862 53.715 1.00 48.89 C
ATOM 21 C6 U B1305 15.372 113.967 54.146 1.00 47.46 C
ATOM 22 P U B1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 23 OP1 U B1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 24 OP2 U B1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 25 O5' U B1306 16.595 108.403 54.983 1.00 48.19 O
TER
Atoms:
C4: (19.111,112.609,52.255)
N3: (19.184,112.013,51.020)
OP1: (15.889,107.570,57.223)
OP2: (17.056,109.845,56.963)
C2: (18.607,110.830,50.635)
C1': (17.197,108.936,51.255)
C3': (17.865,107.189,52.682)
O5': (16.595,108.403,54.983)
O4': (16.152,108.686,52.183)
C5': (15.860,107.443,54.229)
P: (16.126,108.810,56.444)
C4': (16.371,107.399,52.818)
C2': (18.142,107.732,51.289)
O2': (17.826,106.830,50.245)
N1: (17.868,110.194,51.619)
O4: (19.632,113.713,52.424)
O2: (18.749,110.374,49.505)
C6: (17.768,110.730,52.879)
C5: (18.351,111.881,53.221)
O3': (18.250,105.838,52.831)
N3: (19.184,112.013,51.020)
OP1: (15.889,107.570,57.223)
OP2: (17.056,109.845,56.963)
C2: (18.607,110.830,50.635)
C1': (17.197,108.936,51.255)
C3': (17.865,107.189,52.682)
O5': (16.595,108.403,54.983)
O4': (16.152,108.686,52.183)
C5': (15.860,107.443,54.229)
P: (16.126,108.810,56.444)
C4': (16.371,107.399,52.818)
C2': (18.142,107.732,51.289)
O2': (17.826,106.830,50.245)
N1: (17.868,110.194,51.619)
O4: (19.632,113.713,52.424)
O2: (18.749,110.374,49.505)
C6: (17.768,110.730,52.879)
C5: (18.351,111.881,53.221)
O3': (18.250,105.838,52.831)
C4: (16.665,114.857,52.346)
N3: (16.081,113.882,51.577)
OP1: (15.325,113.421,59.745)
OP2: (16.726,114.680,58.005)
C2: (15.167,112.946,51.988)
C1': (13.818,112.062,53.817)
C3': (14.669,110.790,55.599)
O5': (14.993,113.061,57.297)
O4': (13.263,112.560,55.025)
C5': (13.744,112.351,57.377)
P: (15.432,114.093,58.426)
C4': (13.492,111.609,56.091)
C2': (14.404,110.683,54.109)
O2': (13.452,109.698,53.793)
N1: (14.815,113.022,53.323)
O4: (17.459,115.635,51.830)
O2: (14.707,112.112,51.228)
C6: (15.372,113.967,54.146)
C5: (16.259,114.862,53.715)
O3': (14.714,109.524,56.218)
N3: (16.081,113.882,51.577)
OP1: (15.325,113.421,59.745)
OP2: (16.726,114.680,58.005)
C2: (15.167,112.946,51.988)
C1': (13.818,112.062,53.817)
C3': (14.669,110.790,55.599)
O5': (14.993,113.061,57.297)
O4': (13.263,112.560,55.025)
C5': (13.744,112.351,57.377)
P: (15.432,114.093,58.426)
C4': (13.492,111.609,56.091)
C2': (14.404,110.683,54.109)
O2': (13.452,109.698,53.793)
N1: (14.815,113.022,53.323)
O4: (17.459,115.635,51.830)
O2: (14.707,112.112,51.228)
C6: (15.372,113.967,54.146)
C5: (16.259,114.862,53.715)
O3': (14.714,109.524,56.218)
Image (generated by PyMOL):