Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11945:1863
Extra
PDB:
ATOM 1 O3' U A1944 20.213 10.949 90.952 1.00 37.97 O
ATOM 2 P A A1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 3 OP1 A A1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 4 OP2 A A1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 5 O5' A A1945 20.472 13.436 91.089 1.00 33.96 O
ATOM 6 C5' A A1945 20.785 13.504 92.470 1.00 34.16 C
ATOM 7 C4' A A1945 21.456 14.798 92.865 1.00 34.38 C
ATOM 8 O4' A A1945 22.089 14.597 94.149 1.00 34.51 O
ATOM 9 C3' A A1945 22.540 15.302 91.939 1.00 34.22 C
ATOM 10 O3' A A1945 22.604 16.721 92.020 1.00 34.47 O
ATOM 11 C2' A A1945 23.797 14.695 92.567 1.00 34.12 C
ATOM 12 O2' A A1945 25.000 15.349 92.227 1.00 34.09 O
ATOM 13 C1' A A1945 23.474 14.798 94.056 1.00 34.42 C
ATOM 14 N9 A A1945 24.114 13.776 94.909 1.00 34.36 N
ATOM 15 C8 A A1945 24.256 12.427 94.754 1.00 34.11 C
ATOM 16 N7 A A1945 24.866 11.783 95.727 1.00 34.15 N
ATOM 17 C5 A A1945 25.099 12.765 96.626 1.00 34.45 C
ATOM 18 C6 A A1945 25.723 12.746 97.891 1.00 34.66 C
ATOM 19 N6 A A1945 26.221 11.683 98.531 1.00 34.60 N
ATOM 20 N1 A A1945 25.839 13.934 98.514 1.00 34.96 N
ATOM 21 C2 A A1945 25.328 15.018 97.891 1.00 35.05 C
ATOM 22 N3 A A1945 24.724 15.154 96.718 1.00 34.88 N
ATOM 23 C4 A A1945 24.649 13.972 96.135 1.00 34.58 C
ATOM 24 P A A1946 22.411 17.642 90.696 1.00 41.07 P
ATOM 25 OP1 A A1946 22.861 19.008 91.043 1.00 41.34 O
ATOM 26 OP2 A A1946 21.011 17.455 90.234 1.00 41.09 O
ATOM 27 O5' A A1946 23.420 17.016 89.666 1.00 40.72 O
TER
ATOM 1 O3' C B 862 25.064 8.433 97.706 1.00 38.58 O
ATOM 2 P U B 863 26.513 7.754 97.613 1.00 38.16 P
ATOM 3 OP1 U B 863 27.470 8.861 97.597 1.00 38.24 O
ATOM 4 OP2 U B 863 26.549 6.818 96.481 1.00 37.83 O
ATOM 5 O5' U B 863 26.607 6.942 98.984 1.00 38.34 O
ATOM 6 C5' U B 863 26.663 7.602 100.227 1.00 38.67 C
ATOM 7 C4' U B 863 26.848 6.628 101.351 1.00 38.79 C
ATOM 8 O4' U B 863 25.734 5.737 101.380 1.00 38.76 O
ATOM 9 C3' U B 863 28.050 5.711 101.251 1.00 38.61 C
ATOM 10 O3' U B 863 29.248 6.327 101.737 1.00 38.74 O
ATOM 11 C2' U B 863 27.600 4.490 102.052 1.00 38.68 C
ATOM 12 O2' U B 863 27.690 4.736 103.435 1.00 39.02 O
ATOM 13 C1' U B 863 26.136 4.437 101.713 1.00 38.67 C
ATOM 14 N1 U B 863 25.872 3.574 100.577 1.00 38.36 N
ATOM 15 C2 U B 863 25.780 2.228 100.842 1.00 38.30 C
ATOM 16 O2 U B 863 25.918 1.764 101.945 1.00 38.49 O
ATOM 17 N3 U B 863 25.550 1.427 99.774 1.00 38.02 N
ATOM 18 C4 U B 863 25.434 1.891 98.507 1.00 37.80 C
ATOM 19 O4 U B 863 25.249 1.057 97.676 1.00 37.58 O
ATOM 20 C5 U B 863 25.526 3.302 98.274 1.00 37.87 C
ATOM 21 C6 U B 863 25.724 4.098 99.318 1.00 38.15 C
ATOM 22 P A B 864 30.630 6.122 100.966 1.00 36.60 P
ATOM 23 OP1 A B 864 30.296 5.546 99.653 1.00 36.26 O
ATOM 24 OP2 A B 864 31.518 5.360 101.857 1.00 36.69 O
ATOM 25 O5' A B 864 31.185 7.581 100.836 1.00 36.71 O
TER
ATOM 2 P A A1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 3 OP1 A A1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 4 OP2 A A1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 5 O5' A A1945 20.472 13.436 91.089 1.00 33.96 O
ATOM 6 C5' A A1945 20.785 13.504 92.470 1.00 34.16 C
ATOM 7 C4' A A1945 21.456 14.798 92.865 1.00 34.38 C
ATOM 8 O4' A A1945 22.089 14.597 94.149 1.00 34.51 O
ATOM 9 C3' A A1945 22.540 15.302 91.939 1.00 34.22 C
ATOM 10 O3' A A1945 22.604 16.721 92.020 1.00 34.47 O
ATOM 11 C2' A A1945 23.797 14.695 92.567 1.00 34.12 C
ATOM 12 O2' A A1945 25.000 15.349 92.227 1.00 34.09 O
ATOM 13 C1' A A1945 23.474 14.798 94.056 1.00 34.42 C
ATOM 14 N9 A A1945 24.114 13.776 94.909 1.00 34.36 N
ATOM 15 C8 A A1945 24.256 12.427 94.754 1.00 34.11 C
ATOM 16 N7 A A1945 24.866 11.783 95.727 1.00 34.15 N
ATOM 17 C5 A A1945 25.099 12.765 96.626 1.00 34.45 C
ATOM 18 C6 A A1945 25.723 12.746 97.891 1.00 34.66 C
ATOM 19 N6 A A1945 26.221 11.683 98.531 1.00 34.60 N
ATOM 20 N1 A A1945 25.839 13.934 98.514 1.00 34.96 N
ATOM 21 C2 A A1945 25.328 15.018 97.891 1.00 35.05 C
ATOM 22 N3 A A1945 24.724 15.154 96.718 1.00 34.88 N
ATOM 23 C4 A A1945 24.649 13.972 96.135 1.00 34.58 C
ATOM 24 P A A1946 22.411 17.642 90.696 1.00 41.07 P
ATOM 25 OP1 A A1946 22.861 19.008 91.043 1.00 41.34 O
ATOM 26 OP2 A A1946 21.011 17.455 90.234 1.00 41.09 O
ATOM 27 O5' A A1946 23.420 17.016 89.666 1.00 40.72 O
TER
ATOM 1 O3' C B 862 25.064 8.433 97.706 1.00 38.58 O
ATOM 2 P U B 863 26.513 7.754 97.613 1.00 38.16 P
ATOM 3 OP1 U B 863 27.470 8.861 97.597 1.00 38.24 O
ATOM 4 OP2 U B 863 26.549 6.818 96.481 1.00 37.83 O
ATOM 5 O5' U B 863 26.607 6.942 98.984 1.00 38.34 O
ATOM 6 C5' U B 863 26.663 7.602 100.227 1.00 38.67 C
ATOM 7 C4' U B 863 26.848 6.628 101.351 1.00 38.79 C
ATOM 8 O4' U B 863 25.734 5.737 101.380 1.00 38.76 O
ATOM 9 C3' U B 863 28.050 5.711 101.251 1.00 38.61 C
ATOM 10 O3' U B 863 29.248 6.327 101.737 1.00 38.74 O
ATOM 11 C2' U B 863 27.600 4.490 102.052 1.00 38.68 C
ATOM 12 O2' U B 863 27.690 4.736 103.435 1.00 39.02 O
ATOM 13 C1' U B 863 26.136 4.437 101.713 1.00 38.67 C
ATOM 14 N1 U B 863 25.872 3.574 100.577 1.00 38.36 N
ATOM 15 C2 U B 863 25.780 2.228 100.842 1.00 38.30 C
ATOM 16 O2 U B 863 25.918 1.764 101.945 1.00 38.49 O
ATOM 17 N3 U B 863 25.550 1.427 99.774 1.00 38.02 N
ATOM 18 C4 U B 863 25.434 1.891 98.507 1.00 37.80 C
ATOM 19 O4 U B 863 25.249 1.057 97.676 1.00 37.58 O
ATOM 20 C5 U B 863 25.526 3.302 98.274 1.00 37.87 C
ATOM 21 C6 U B 863 25.724 4.098 99.318 1.00 38.15 C
ATOM 22 P A B 864 30.630 6.122 100.966 1.00 36.60 P
ATOM 23 OP1 A B 864 30.296 5.546 99.653 1.00 36.26 O
ATOM 24 OP2 A B 864 31.518 5.360 101.857 1.00 36.69 O
ATOM 25 O5' A B 864 31.185 7.581 100.836 1.00 36.71 O
TER
Atoms:
OP1: (20.404,12.236,88.920)
OP2: (22.423,11.969,90.392)
C3': (22.540,15.302,91.939)
C1': (23.474,14.798,94.056)
C5': (20.785,13.504,92.470)
O4': (22.089,14.597,94.149)
C8: (24.256,12.427,94.754)
O2': (25.000,15.349,92.227)
C6: (25.723,12.746,97.891)
C5: (25.099,12.765,96.626)
C4: (24.649,13.972,96.135)
P: (20.931,12.174,90.237)
C4': (21.456,14.798,92.865)
C2': (23.797,14.695,92.567)
C2: (25.328,15.018,97.891)
N1: (25.839,13.934,98.514)
N3: (24.724,15.154,96.718)
N6: (26.221,11.683,98.531)
N7: (24.866,11.783,95.727)
N9: (24.114,13.776,94.909)
O5': (20.472,13.436,91.089)
O3': (22.604,16.721,92.020)
OP2: (22.423,11.969,90.392)
C3': (22.540,15.302,91.939)
C1': (23.474,14.798,94.056)
C5': (20.785,13.504,92.470)
O4': (22.089,14.597,94.149)
C8: (24.256,12.427,94.754)
O2': (25.000,15.349,92.227)
C6: (25.723,12.746,97.891)
C5: (25.099,12.765,96.626)
C4: (24.649,13.972,96.135)
P: (20.931,12.174,90.237)
C4': (21.456,14.798,92.865)
C2': (23.797,14.695,92.567)
C2: (25.328,15.018,97.891)
N1: (25.839,13.934,98.514)
N3: (24.724,15.154,96.718)
N6: (26.221,11.683,98.531)
N7: (24.866,11.783,95.727)
N9: (24.114,13.776,94.909)
O5': (20.472,13.436,91.089)
O3': (22.604,16.721,92.020)
C4: (25.434,1.891,98.507)
N3: (25.550,1.427,99.774)
OP1: (27.470,8.861,97.597)
OP2: (26.549,6.818,96.481)
C2: (25.780,2.228,100.842)
C1': (26.136,4.437,101.713)
C3': (28.050,5.711,101.251)
O5': (26.607,6.942,98.984)
O4': (25.734,5.737,101.380)
C5': (26.663,7.602,100.227)
P: (26.513,7.754,97.613)
C4': (26.848,6.628,101.351)
C2': (27.600,4.490,102.052)
O2': (27.690,4.736,103.435)
N1: (25.872,3.574,100.577)
O4: (25.249,1.057,97.676)
O2: (25.918,1.764,101.945)
C6: (25.724,4.098,99.318)
C5: (25.526,3.302,98.274)
O3': (29.248,6.327,101.737)
N3: (25.550,1.427,99.774)
OP1: (27.470,8.861,97.597)
OP2: (26.549,6.818,96.481)
C2: (25.780,2.228,100.842)
C1': (26.136,4.437,101.713)
C3': (28.050,5.711,101.251)
O5': (26.607,6.942,98.984)
O4': (25.734,5.737,101.380)
C5': (26.663,7.602,100.227)
P: (26.513,7.754,97.613)
C4': (26.848,6.628,101.351)
C2': (27.600,4.490,102.052)
O2': (27.690,4.736,103.435)
N1: (25.872,3.574,100.577)
O4: (25.249,1.057,97.676)
O2: (25.918,1.764,101.945)
C6: (25.724,4.098,99.318)
C5: (25.526,3.302,98.274)
O3': (29.248,6.327,101.737)
Image (generated by PyMOL):