Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61238:61208
Extra
PDB:
ATOM 1 O3' G A1237 227.863 -46.142 309.368 1.00133.64 O
ATOM 2 P A A1238 228.903 -45.670 308.247 1.00 90.89 P
ATOM 3 OP1 A A1238 229.189 -46.845 307.397 1.00 90.22 O
ATOM 4 OP2 A A1238 230.025 -45.002 308.953 1.00 90.98 O
ATOM 5 O5' A A1238 228.060 -44.599 307.434 1.00 90.93 O
ATOM 6 C5' A A1238 227.019 -43.884 308.074 1.00 91.72 C
ATOM 7 C4' A A1238 227.569 -42.749 308.887 1.00 92.12 C
ATOM 8 O4' A A1238 227.963 -41.683 307.978 1.00 91.71 O
ATOM 9 C3' A A1238 226.587 -42.045 309.816 1.00 93.07 C
ATOM 10 O3' A A1238 226.158 -42.770 311.006 1.00 93.72 O
ATOM 11 C2' A A1238 227.242 -40.684 310.007 1.00 93.18 C
ATOM 12 O2' A A1238 228.396 -40.784 310.827 1.00 93.20 O
ATOM 13 C1' A A1238 227.712 -40.423 308.574 1.00 92.32 C
ATOM 14 N9 A A1238 226.693 -39.687 307.786 1.00 92.40 N
ATOM 15 C8 A A1238 226.910 -38.506 307.107 1.00 92.19 C
ATOM 16 N7 A A1238 225.853 -37.976 306.517 1.00 92.37 N
ATOM 17 C5 A A1238 224.825 -38.857 306.849 1.00 92.76 C
ATOM 18 C6 A A1238 223.430 -38.878 306.548 1.00 93.16 C
ATOM 19 N6 A A1238 222.762 -37.974 305.815 1.00 93.22 N
ATOM 20 N1 A A1238 222.695 -39.898 307.033 1.00 93.53 N
ATOM 21 C2 A A1238 223.309 -40.829 307.758 1.00 93.48 C
ATOM 22 N3 A A1238 224.584 -40.912 308.102 1.00 93.14 N
ATOM 23 C4 A A1238 225.325 -39.899 307.634 1.00 92.79 C
ATOM 24 P G A1239 227.064 -42.972 312.343 1.00121.16 P
ATOM 25 OP1 G A1239 228.262 -43.774 311.953 1.00120.39 O
ATOM 26 OP2 G A1239 226.155 -43.516 313.391 1.00121.96 O
ATOM 27 O5' G A1239 227.499 -41.490 312.741 1.00121.50 O
TER
ATOM 1 O3' G B1207 222.933 -35.343 303.964 1.00 92.01 O
ATOM 2 P U B1208 223.660 -34.100 304.699 1.00 94.44 P
ATOM 3 OP1 U B1208 223.027 -33.952 306.039 1.00 95.44 O
ATOM 4 OP2 U B1208 223.615 -32.947 303.756 1.00 94.19 O
ATOM 5 O5' U B1208 225.157 -34.633 304.859 1.00 93.84 O
ATOM 6 C5' U B1208 226.213 -33.789 305.278 1.00 93.83 C
ATOM 7 C4' U B1208 227.486 -34.578 305.463 1.00 93.32 C
ATOM 8 O4' U B1208 227.824 -35.251 304.220 1.00 92.45 O
ATOM 9 C3' U B1208 228.723 -33.766 305.809 1.00 93.24 C
ATOM 10 O3' U B1208 228.835 -33.492 307.203 1.00 94.00 O
ATOM 11 C2' U B1208 229.872 -34.609 305.236 1.00 92.42 C
ATOM 12 O2' U B1208 230.220 -35.675 306.117 1.00 92.56 O
ATOM 13 C1' U B1208 229.217 -35.202 303.989 1.00 91.89 C
ATOM 14 N1 U B1208 229.456 -34.384 302.758 1.00 91.35 N
ATOM 15 C2 U B1208 230.659 -34.447 302.083 1.00 90.66 C
ATOM 16 O2 U B1208 231.590 -35.137 302.465 1.00 90.46 O
ATOM 17 N3 U B1208 230.741 -33.672 300.951 1.00 90.23 N
ATOM 18 C4 U B1208 229.761 -32.864 300.420 1.00 90.40 C
ATOM 19 O4 U B1208 229.974 -32.226 299.392 1.00 89.96 O
ATOM 20 C5 U B1208 228.542 -32.856 301.147 1.00 91.13 C
ATOM 21 C6 U B1208 228.443 -33.602 302.248 1.00 91.56 C
ATOM 22 P C B1209 229.030 -31.969 307.720 1.00105.82 P
ATOM 23 OP1 C B1209 228.860 -31.989 309.197 1.00106.68 O
ATOM 24 OP2 C B1209 228.130 -31.109 306.899 1.00105.85 O
ATOM 25 O5' C B1209 230.555 -31.656 307.356 1.00105.20 O
TER
ATOM 2 P A A1238 228.903 -45.670 308.247 1.00 90.89 P
ATOM 3 OP1 A A1238 229.189 -46.845 307.397 1.00 90.22 O
ATOM 4 OP2 A A1238 230.025 -45.002 308.953 1.00 90.98 O
ATOM 5 O5' A A1238 228.060 -44.599 307.434 1.00 90.93 O
ATOM 6 C5' A A1238 227.019 -43.884 308.074 1.00 91.72 C
ATOM 7 C4' A A1238 227.569 -42.749 308.887 1.00 92.12 C
ATOM 8 O4' A A1238 227.963 -41.683 307.978 1.00 91.71 O
ATOM 9 C3' A A1238 226.587 -42.045 309.816 1.00 93.07 C
ATOM 10 O3' A A1238 226.158 -42.770 311.006 1.00 93.72 O
ATOM 11 C2' A A1238 227.242 -40.684 310.007 1.00 93.18 C
ATOM 12 O2' A A1238 228.396 -40.784 310.827 1.00 93.20 O
ATOM 13 C1' A A1238 227.712 -40.423 308.574 1.00 92.32 C
ATOM 14 N9 A A1238 226.693 -39.687 307.786 1.00 92.40 N
ATOM 15 C8 A A1238 226.910 -38.506 307.107 1.00 92.19 C
ATOM 16 N7 A A1238 225.853 -37.976 306.517 1.00 92.37 N
ATOM 17 C5 A A1238 224.825 -38.857 306.849 1.00 92.76 C
ATOM 18 C6 A A1238 223.430 -38.878 306.548 1.00 93.16 C
ATOM 19 N6 A A1238 222.762 -37.974 305.815 1.00 93.22 N
ATOM 20 N1 A A1238 222.695 -39.898 307.033 1.00 93.53 N
ATOM 21 C2 A A1238 223.309 -40.829 307.758 1.00 93.48 C
ATOM 22 N3 A A1238 224.584 -40.912 308.102 1.00 93.14 N
ATOM 23 C4 A A1238 225.325 -39.899 307.634 1.00 92.79 C
ATOM 24 P G A1239 227.064 -42.972 312.343 1.00121.16 P
ATOM 25 OP1 G A1239 228.262 -43.774 311.953 1.00120.39 O
ATOM 26 OP2 G A1239 226.155 -43.516 313.391 1.00121.96 O
ATOM 27 O5' G A1239 227.499 -41.490 312.741 1.00121.50 O
TER
ATOM 1 O3' G B1207 222.933 -35.343 303.964 1.00 92.01 O
ATOM 2 P U B1208 223.660 -34.100 304.699 1.00 94.44 P
ATOM 3 OP1 U B1208 223.027 -33.952 306.039 1.00 95.44 O
ATOM 4 OP2 U B1208 223.615 -32.947 303.756 1.00 94.19 O
ATOM 5 O5' U B1208 225.157 -34.633 304.859 1.00 93.84 O
ATOM 6 C5' U B1208 226.213 -33.789 305.278 1.00 93.83 C
ATOM 7 C4' U B1208 227.486 -34.578 305.463 1.00 93.32 C
ATOM 8 O4' U B1208 227.824 -35.251 304.220 1.00 92.45 O
ATOM 9 C3' U B1208 228.723 -33.766 305.809 1.00 93.24 C
ATOM 10 O3' U B1208 228.835 -33.492 307.203 1.00 94.00 O
ATOM 11 C2' U B1208 229.872 -34.609 305.236 1.00 92.42 C
ATOM 12 O2' U B1208 230.220 -35.675 306.117 1.00 92.56 O
ATOM 13 C1' U B1208 229.217 -35.202 303.989 1.00 91.89 C
ATOM 14 N1 U B1208 229.456 -34.384 302.758 1.00 91.35 N
ATOM 15 C2 U B1208 230.659 -34.447 302.083 1.00 90.66 C
ATOM 16 O2 U B1208 231.590 -35.137 302.465 1.00 90.46 O
ATOM 17 N3 U B1208 230.741 -33.672 300.951 1.00 90.23 N
ATOM 18 C4 U B1208 229.761 -32.864 300.420 1.00 90.40 C
ATOM 19 O4 U B1208 229.974 -32.226 299.392 1.00 89.96 O
ATOM 20 C5 U B1208 228.542 -32.856 301.147 1.00 91.13 C
ATOM 21 C6 U B1208 228.443 -33.602 302.248 1.00 91.56 C
ATOM 22 P C B1209 229.030 -31.969 307.720 1.00105.82 P
ATOM 23 OP1 C B1209 228.860 -31.989 309.197 1.00106.68 O
ATOM 24 OP2 C B1209 228.130 -31.109 306.899 1.00105.85 O
ATOM 25 O5' C B1209 230.555 -31.656 307.356 1.00105.20 O
TER
Atoms:
OP1: (229.189,-46.845,307.397)
OP2: (230.025,-45.002,308.953)
C3': (226.587,-42.045,309.816)
C1': (227.712,-40.423,308.574)
C5': (227.019,-43.884,308.074)
O4': (227.963,-41.683,307.978)
C8: (226.910,-38.506,307.107)
O2': (228.396,-40.784,310.827)
C6: (223.430,-38.878,306.548)
C5: (224.825,-38.857,306.849)
C4: (225.325,-39.899,307.634)
P: (228.903,-45.670,308.247)
C4': (227.569,-42.749,308.887)
C2': (227.242,-40.684,310.007)
C2: (223.309,-40.829,307.758)
N1: (222.695,-39.898,307.033)
N3: (224.584,-40.912,308.102)
N6: (222.762,-37.974,305.815)
N7: (225.853,-37.976,306.517)
N9: (226.693,-39.687,307.786)
O5': (228.060,-44.599,307.434)
O3': (226.158,-42.770,311.006)
OP2: (230.025,-45.002,308.953)
C3': (226.587,-42.045,309.816)
C1': (227.712,-40.423,308.574)
C5': (227.019,-43.884,308.074)
O4': (227.963,-41.683,307.978)
C8: (226.910,-38.506,307.107)
O2': (228.396,-40.784,310.827)
C6: (223.430,-38.878,306.548)
C5: (224.825,-38.857,306.849)
C4: (225.325,-39.899,307.634)
P: (228.903,-45.670,308.247)
C4': (227.569,-42.749,308.887)
C2': (227.242,-40.684,310.007)
C2: (223.309,-40.829,307.758)
N1: (222.695,-39.898,307.033)
N3: (224.584,-40.912,308.102)
N6: (222.762,-37.974,305.815)
N7: (225.853,-37.976,306.517)
N9: (226.693,-39.687,307.786)
O5': (228.060,-44.599,307.434)
O3': (226.158,-42.770,311.006)
C4: (229.761,-32.864,300.420)
N3: (230.741,-33.672,300.951)
OP1: (223.027,-33.952,306.039)
OP2: (223.615,-32.947,303.756)
C2: (230.659,-34.447,302.083)
C1': (229.217,-35.202,303.989)
C3': (228.723,-33.766,305.809)
O5': (225.157,-34.633,304.859)
O4': (227.824,-35.251,304.220)
C5': (226.213,-33.789,305.278)
P: (223.660,-34.100,304.699)
C4': (227.486,-34.578,305.463)
C2': (229.872,-34.609,305.236)
O2': (230.220,-35.675,306.117)
N1: (229.456,-34.384,302.758)
O4: (229.974,-32.226,299.392)
O2: (231.590,-35.137,302.465)
C6: (228.443,-33.602,302.248)
C5: (228.542,-32.856,301.147)
O3': (228.835,-33.492,307.203)
N3: (230.741,-33.672,300.951)
OP1: (223.027,-33.952,306.039)
OP2: (223.615,-32.947,303.756)
C2: (230.659,-34.447,302.083)
C1': (229.217,-35.202,303.989)
C3': (228.723,-33.766,305.809)
O5': (225.157,-34.633,304.859)
O4': (227.824,-35.251,304.220)
C5': (226.213,-33.789,305.278)
P: (223.660,-34.100,304.699)
C4': (227.486,-34.578,305.463)
C2': (229.872,-34.609,305.236)
O2': (230.220,-35.675,306.117)
N1: (229.456,-34.384,302.758)
O4: (229.974,-32.226,299.392)
O2: (231.590,-35.137,302.465)
C6: (228.443,-33.602,302.248)
C5: (228.542,-32.856,301.147)
O3': (228.835,-33.492,307.203)
Image (generated by PyMOL):