Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51282:51281
Extra
PDB:
ATOM 1 O3' U A1281 101.409 -5.792 255.323 1.00 32.38 O
ATOM 2 P A A1282 100.502 -6.851 256.145 1.00 34.37 P
ATOM 3 OP1 A A1282 100.208 -8.010 255.221 1.00 34.52 O
ATOM 4 OP2 A A1282 99.378 -6.083 256.727 1.00 34.59 O
ATOM 5 O5' A A1282 101.464 -7.355 257.298 1.00 34.22 O
ATOM 6 C5' A A1282 101.915 -8.698 257.348 1.00 34.23 C
ATOM 7 C4' A A1282 102.250 -9.064 258.743 1.00 34.23 C
ATOM 8 O4' A A1282 102.796 -7.910 259.399 1.00 34.04 O
ATOM 9 C3' A A1282 101.066 -9.456 259.564 1.00 34.57 C
ATOM 10 O3' A A1282 100.847 -10.847 259.493 1.00 34.75 O
ATOM 11 C2' A A1282 101.392 -8.956 260.971 1.00 34.52 C
ATOM 12 O2' A A1282 102.148 -9.929 261.700 1.00 34.47 O
ATOM 13 C1' A A1282 102.288 -7.767 260.683 1.00 34.20 C
ATOM 14 N9 A A1282 101.592 -6.480 260.752 1.00 34.26 N
ATOM 15 C8 A A1282 101.694 -5.515 259.821 1.00 34.12 C
ATOM 16 N7 A A1282 101.048 -4.440 260.117 1.00 34.21 N
ATOM 17 C5 A A1282 100.506 -4.725 261.331 1.00 34.41 C
ATOM 18 C6 A A1282 99.714 -3.970 262.164 1.00 34.59 C
ATOM 19 N6 A A1282 99.340 -2.741 261.860 1.00 34.59 N
ATOM 20 N1 A A1282 99.302 -4.494 263.292 1.00 34.79 N
ATOM 21 C2 A A1282 99.727 -5.706 263.561 1.00 34.79 C
ATOM 22 N3 A A1282 100.474 -6.527 262.869 1.00 34.63 N
ATOM 23 C4 A A1282 100.833 -5.960 261.739 1.00 34.44 C
ATOM 24 P C A1283 99.433 -11.432 259.053 1.00 33.61 P
ATOM 25 OP1 C A1283 99.689 -12.758 258.527 1.00 33.67 O
ATOM 26 OP2 C A1283 98.775 -10.427 258.178 1.00 33.64 O
ATOM 27 O5' C A1283 98.681 -11.524 260.428 1.00 33.86 O
TER
ATOM 1 O3' A B1280 100.868 -0.252 257.932 1.00 40.64 O
ATOM 2 P U B1281 99.455 -0.987 257.742 1.00 32.60 P
ATOM 3 OP1 U B1281 98.631 -0.087 256.925 1.00 32.73 O
ATOM 4 OP2 U B1281 98.958 -1.376 259.106 1.00 32.79 O
ATOM 5 O5' U B1281 99.819 -2.277 256.928 1.00 32.56 O
ATOM 6 C5' U B1281 100.426 -2.199 255.692 1.00 32.38 C
ATOM 7 C4' U B1281 100.582 -3.556 255.097 1.00 32.41 C
ATOM 8 O4' U B1281 101.081 -3.381 253.770 1.00 32.27 O
ATOM 9 C3' U B1281 101.606 -4.446 255.767 1.00 32.25 C
ATOM 10 O3' U B1281 101.409 -5.792 255.323 1.00 32.38 O
ATOM 11 C2' U B1281 102.858 -3.941 255.098 1.00 31.92 C
ATOM 12 O2' U B1281 103.946 -4.790 255.240 1.00 31.74 O
ATOM 13 C1' U B1281 102.367 -3.923 253.677 1.00 32.01 C
ATOM 14 N1 U B1281 103.087 -3.066 252.779 1.00 31.79 N
ATOM 15 C2 U B1281 103.759 -3.594 251.691 1.00 31.67 C
ATOM 16 O2 U B1281 103.901 -4.815 251.527 1.00 31.73 O
ATOM 17 N3 U B1281 104.316 -2.633 250.870 1.00 31.50 N
ATOM 18 C4 U B1281 104.195 -1.288 251.049 1.00 31.45 C
ATOM 19 O4 U B1281 104.709 -0.508 250.274 1.00 31.30 O
ATOM 20 C5 U B1281 103.450 -0.869 252.150 1.00 31.58 C
ATOM 21 C6 U B1281 102.898 -1.735 252.960 1.00 31.75 C
ATOM 22 P A B1282 100.502 -6.851 256.145 1.00 34.37 P
ATOM 23 OP1 A B1282 100.208 -8.010 255.221 1.00 34.52 O
ATOM 24 OP2 A B1282 99.378 -6.083 256.727 1.00 34.59 O
ATOM 25 O5' A B1282 101.464 -7.355 257.298 1.00 34.22 O
TER
ATOM 2 P A A1282 100.502 -6.851 256.145 1.00 34.37 P
ATOM 3 OP1 A A1282 100.208 -8.010 255.221 1.00 34.52 O
ATOM 4 OP2 A A1282 99.378 -6.083 256.727 1.00 34.59 O
ATOM 5 O5' A A1282 101.464 -7.355 257.298 1.00 34.22 O
ATOM 6 C5' A A1282 101.915 -8.698 257.348 1.00 34.23 C
ATOM 7 C4' A A1282 102.250 -9.064 258.743 1.00 34.23 C
ATOM 8 O4' A A1282 102.796 -7.910 259.399 1.00 34.04 O
ATOM 9 C3' A A1282 101.066 -9.456 259.564 1.00 34.57 C
ATOM 10 O3' A A1282 100.847 -10.847 259.493 1.00 34.75 O
ATOM 11 C2' A A1282 101.392 -8.956 260.971 1.00 34.52 C
ATOM 12 O2' A A1282 102.148 -9.929 261.700 1.00 34.47 O
ATOM 13 C1' A A1282 102.288 -7.767 260.683 1.00 34.20 C
ATOM 14 N9 A A1282 101.592 -6.480 260.752 1.00 34.26 N
ATOM 15 C8 A A1282 101.694 -5.515 259.821 1.00 34.12 C
ATOM 16 N7 A A1282 101.048 -4.440 260.117 1.00 34.21 N
ATOM 17 C5 A A1282 100.506 -4.725 261.331 1.00 34.41 C
ATOM 18 C6 A A1282 99.714 -3.970 262.164 1.00 34.59 C
ATOM 19 N6 A A1282 99.340 -2.741 261.860 1.00 34.59 N
ATOM 20 N1 A A1282 99.302 -4.494 263.292 1.00 34.79 N
ATOM 21 C2 A A1282 99.727 -5.706 263.561 1.00 34.79 C
ATOM 22 N3 A A1282 100.474 -6.527 262.869 1.00 34.63 N
ATOM 23 C4 A A1282 100.833 -5.960 261.739 1.00 34.44 C
ATOM 24 P C A1283 99.433 -11.432 259.053 1.00 33.61 P
ATOM 25 OP1 C A1283 99.689 -12.758 258.527 1.00 33.67 O
ATOM 26 OP2 C A1283 98.775 -10.427 258.178 1.00 33.64 O
ATOM 27 O5' C A1283 98.681 -11.524 260.428 1.00 33.86 O
TER
ATOM 1 O3' A B1280 100.868 -0.252 257.932 1.00 40.64 O
ATOM 2 P U B1281 99.455 -0.987 257.742 1.00 32.60 P
ATOM 3 OP1 U B1281 98.631 -0.087 256.925 1.00 32.73 O
ATOM 4 OP2 U B1281 98.958 -1.376 259.106 1.00 32.79 O
ATOM 5 O5' U B1281 99.819 -2.277 256.928 1.00 32.56 O
ATOM 6 C5' U B1281 100.426 -2.199 255.692 1.00 32.38 C
ATOM 7 C4' U B1281 100.582 -3.556 255.097 1.00 32.41 C
ATOM 8 O4' U B1281 101.081 -3.381 253.770 1.00 32.27 O
ATOM 9 C3' U B1281 101.606 -4.446 255.767 1.00 32.25 C
ATOM 10 O3' U B1281 101.409 -5.792 255.323 1.00 32.38 O
ATOM 11 C2' U B1281 102.858 -3.941 255.098 1.00 31.92 C
ATOM 12 O2' U B1281 103.946 -4.790 255.240 1.00 31.74 O
ATOM 13 C1' U B1281 102.367 -3.923 253.677 1.00 32.01 C
ATOM 14 N1 U B1281 103.087 -3.066 252.779 1.00 31.79 N
ATOM 15 C2 U B1281 103.759 -3.594 251.691 1.00 31.67 C
ATOM 16 O2 U B1281 103.901 -4.815 251.527 1.00 31.73 O
ATOM 17 N3 U B1281 104.316 -2.633 250.870 1.00 31.50 N
ATOM 18 C4 U B1281 104.195 -1.288 251.049 1.00 31.45 C
ATOM 19 O4 U B1281 104.709 -0.508 250.274 1.00 31.30 O
ATOM 20 C5 U B1281 103.450 -0.869 252.150 1.00 31.58 C
ATOM 21 C6 U B1281 102.898 -1.735 252.960 1.00 31.75 C
ATOM 22 P A B1282 100.502 -6.851 256.145 1.00 34.37 P
ATOM 23 OP1 A B1282 100.208 -8.010 255.221 1.00 34.52 O
ATOM 24 OP2 A B1282 99.378 -6.083 256.727 1.00 34.59 O
ATOM 25 O5' A B1282 101.464 -7.355 257.298 1.00 34.22 O
TER
Atoms:
OP1: (100.208,-8.010,255.221)
OP2: (99.378,-6.083,256.727)
C3': (101.066,-9.456,259.564)
C1': (102.288,-7.767,260.683)
C5': (101.915,-8.698,257.348)
O4': (102.796,-7.910,259.399)
C8: (101.694,-5.515,259.821)
O2': (102.148,-9.929,261.700)
C6: (99.714,-3.970,262.164)
C5: (100.506,-4.725,261.331)
C4: (100.833,-5.960,261.739)
P: (100.502,-6.851,256.145)
C4': (102.250,-9.064,258.743)
C2': (101.392,-8.956,260.971)
C2: (99.727,-5.706,263.561)
N1: (99.302,-4.494,263.292)
N3: (100.474,-6.527,262.869)
N6: (99.340,-2.741,261.860)
N7: (101.048,-4.440,260.117)
N9: (101.592,-6.480,260.752)
O5': (101.464,-7.355,257.298)
O3': (100.847,-10.847,259.493)
OP2: (99.378,-6.083,256.727)
C3': (101.066,-9.456,259.564)
C1': (102.288,-7.767,260.683)
C5': (101.915,-8.698,257.348)
O4': (102.796,-7.910,259.399)
C8: (101.694,-5.515,259.821)
O2': (102.148,-9.929,261.700)
C6: (99.714,-3.970,262.164)
C5: (100.506,-4.725,261.331)
C4: (100.833,-5.960,261.739)
P: (100.502,-6.851,256.145)
C4': (102.250,-9.064,258.743)
C2': (101.392,-8.956,260.971)
C2: (99.727,-5.706,263.561)
N1: (99.302,-4.494,263.292)
N3: (100.474,-6.527,262.869)
N6: (99.340,-2.741,261.860)
N7: (101.048,-4.440,260.117)
N9: (101.592,-6.480,260.752)
O5': (101.464,-7.355,257.298)
O3': (100.847,-10.847,259.493)
C4: (104.195,-1.288,251.049)
N3: (104.316,-2.633,250.870)
OP1: (98.631,-0.087,256.925)
OP2: (98.958,-1.376,259.106)
C2: (103.759,-3.594,251.691)
C1': (102.367,-3.923,253.677)
C3': (101.606,-4.446,255.767)
O5': (99.819,-2.277,256.928)
O4': (101.081,-3.381,253.770)
C5': (100.426,-2.199,255.692)
P: (99.455,-0.987,257.742)
C4': (100.582,-3.556,255.097)
C2': (102.858,-3.941,255.098)
O2': (103.946,-4.790,255.240)
N1: (103.087,-3.066,252.779)
O4: (104.709,-0.508,250.274)
O2: (103.901,-4.815,251.527)
C6: (102.898,-1.735,252.960)
C5: (103.450,-0.869,252.150)
O3': (101.409,-5.792,255.323)
N3: (104.316,-2.633,250.870)
OP1: (98.631,-0.087,256.925)
OP2: (98.958,-1.376,259.106)
C2: (103.759,-3.594,251.691)
C1': (102.367,-3.923,253.677)
C3': (101.606,-4.446,255.767)
O5': (99.819,-2.277,256.928)
O4': (101.081,-3.381,253.770)
C5': (100.426,-2.199,255.692)
P: (99.455,-0.987,257.742)
C4': (100.582,-3.556,255.097)
C2': (102.858,-3.941,255.098)
O2': (103.946,-4.790,255.240)
N1: (103.087,-3.066,252.779)
O4: (104.709,-0.508,250.274)
O2: (103.901,-4.815,251.527)
C6: (102.898,-1.735,252.960)
C5: (103.450,-0.869,252.150)
O3': (101.409,-5.792,255.323)
Image (generated by PyMOL):