Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A60:A53
Extra
PDB:
ATOM 1 O3' A A 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 2 P A A 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A A 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A A 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A A 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A A 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A A 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A A 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A A 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A A 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A A 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A A 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A A 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A A 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A A 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A A 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A A 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A A 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A A 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A A 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A A 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A A 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A A 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G A 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G A 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G A 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G A 61 48.022 158.535 29.960 1.00 57.17 O
TER
ATOM 1 O3' C B 52 51.896 149.545 44.352 1.00 51.92 O
ATOM 2 P U B 53 52.820 149.364 43.057 1.00 52.43 P
ATOM 3 OP1 U B 53 53.199 147.939 42.935 1.00 52.26 O
ATOM 4 OP2 U B 53 53.878 150.397 43.163 1.00 52.59 O
ATOM 5 O5' U B 53 51.871 149.751 41.835 1.00 54.12 O
ATOM 6 C5' U B 53 50.831 148.857 41.384 1.00 55.85 C
ATOM 7 C4' U B 53 50.058 149.463 40.231 1.00 56.30 C
ATOM 8 O4' U B 53 49.392 150.677 40.671 1.00 55.93 O
ATOM 9 C3' U B 53 50.837 149.904 39.002 1.00 54.95 C
ATOM 10 O3' U B 53 51.166 148.815 38.145 1.00 53.12 O
ATOM 11 C2' U B 53 49.831 150.832 38.351 1.00 56.27 C
ATOM 12 O2' U B 53 48.775 150.082 37.778 1.00 57.55 O
ATOM 13 C1' U B 53 49.280 151.563 39.575 1.00 57.34 C
ATOM 14 N1 U B 53 50.051 152.775 39.884 1.00 59.12 N
ATOM 15 C2 U B 53 49.690 153.978 39.266 1.00 59.77 C
ATOM 16 O2 U B 53 48.773 154.076 38.460 1.00 59.40 O
ATOM 17 N3 U B 53 50.458 155.061 39.631 1.00 59.99 N
ATOM 18 C4 U B 53 51.522 155.067 40.508 1.00 60.16 C
ATOM 19 O4 U B 53 52.102 156.126 40.751 1.00 60.74 O
ATOM 20 C5 U B 53 51.829 153.801 41.083 1.00 60.04 C
ATOM 21 C6 U B 53 51.106 152.729 40.765 1.00 59.61 C
ATOM 22 P G B 54 52.524 148.866 37.286 1.00 52.48 P
ATOM 23 OP1 G B 54 52.712 147.584 36.564 1.00 53.48 O
ATOM 24 OP2 G B 54 53.594 149.356 38.188 1.00 53.21 O
ATOM 25 O5' G B 54 52.232 149.994 36.205 1.00 53.81 O
TER
ATOM 2 P A A 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A A 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A A 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A A 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A A 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A A 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A A 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A A 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A A 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A A 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A A 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A A 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A A 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A A 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A A 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A A 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A A 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A A 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A A 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A A 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A A 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A A 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G A 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G A 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G A 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G A 61 48.022 158.535 29.960 1.00 57.17 O
TER
ATOM 1 O3' C B 52 51.896 149.545 44.352 1.00 51.92 O
ATOM 2 P U B 53 52.820 149.364 43.057 1.00 52.43 P
ATOM 3 OP1 U B 53 53.199 147.939 42.935 1.00 52.26 O
ATOM 4 OP2 U B 53 53.878 150.397 43.163 1.00 52.59 O
ATOM 5 O5' U B 53 51.871 149.751 41.835 1.00 54.12 O
ATOM 6 C5' U B 53 50.831 148.857 41.384 1.00 55.85 C
ATOM 7 C4' U B 53 50.058 149.463 40.231 1.00 56.30 C
ATOM 8 O4' U B 53 49.392 150.677 40.671 1.00 55.93 O
ATOM 9 C3' U B 53 50.837 149.904 39.002 1.00 54.95 C
ATOM 10 O3' U B 53 51.166 148.815 38.145 1.00 53.12 O
ATOM 11 C2' U B 53 49.831 150.832 38.351 1.00 56.27 C
ATOM 12 O2' U B 53 48.775 150.082 37.778 1.00 57.55 O
ATOM 13 C1' U B 53 49.280 151.563 39.575 1.00 57.34 C
ATOM 14 N1 U B 53 50.051 152.775 39.884 1.00 59.12 N
ATOM 15 C2 U B 53 49.690 153.978 39.266 1.00 59.77 C
ATOM 16 O2 U B 53 48.773 154.076 38.460 1.00 59.40 O
ATOM 17 N3 U B 53 50.458 155.061 39.631 1.00 59.99 N
ATOM 18 C4 U B 53 51.522 155.067 40.508 1.00 60.16 C
ATOM 19 O4 U B 53 52.102 156.126 40.751 1.00 60.74 O
ATOM 20 C5 U B 53 51.829 153.801 41.083 1.00 60.04 C
ATOM 21 C6 U B 53 51.106 152.729 40.765 1.00 59.61 C
ATOM 22 P G B 54 52.524 148.866 37.286 1.00 52.48 P
ATOM 23 OP1 G B 54 52.712 147.584 36.564 1.00 53.48 O
ATOM 24 OP2 G B 54 53.594 149.356 38.188 1.00 53.21 O
ATOM 25 O5' G B 54 52.232 149.994 36.205 1.00 53.81 O
TER
Atoms:
OP1: (52.027,162.574,32.450)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
C4: (51.522,155.067,40.508)
N3: (50.458,155.061,39.631)
OP1: (53.199,147.939,42.935)
OP2: (53.878,150.397,43.163)
C2: (49.690,153.978,39.266)
C1': (49.280,151.563,39.575)
C3': (50.837,149.904,39.002)
O5': (51.871,149.751,41.835)
O4': (49.392,150.677,40.671)
C5': (50.831,148.857,41.384)
P: (52.820,149.364,43.057)
C4': (50.058,149.463,40.231)
C2': (49.831,150.832,38.351)
O2': (48.775,150.082,37.778)
N1: (50.051,152.775,39.884)
O4: (52.102,156.126,40.751)
O2: (48.773,154.076,38.460)
C6: (51.106,152.729,40.765)
C5: (51.829,153.801,41.083)
O3': (51.166,148.815,38.145)
N3: (50.458,155.061,39.631)
OP1: (53.199,147.939,42.935)
OP2: (53.878,150.397,43.163)
C2: (49.690,153.978,39.266)
C1': (49.280,151.563,39.575)
C3': (50.837,149.904,39.002)
O5': (51.871,149.751,41.835)
O4': (49.392,150.677,40.671)
C5': (50.831,148.857,41.384)
P: (52.820,149.364,43.057)
C4': (50.058,149.463,40.231)
C2': (49.831,150.832,38.351)
O2': (48.775,150.082,37.778)
N1: (50.051,152.775,39.884)
O4: (52.102,156.126,40.751)
O2: (48.773,154.076,38.460)
C6: (51.106,152.729,40.765)
C5: (51.829,153.801,41.083)
O3': (51.166,148.815,38.145)
Image (generated by PyMOL):