Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0548:0547
Extra
PDB:
ATOM 1 O3' U A 547 -13.356 113.312 104.770 1.00 71.21 O
ATOM 2 P U A 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 3 OP1 U A 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 4 OP2 U A 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 5 O5' U A 548 -14.224 111.098 103.903 1.00 68.22 O
ATOM 6 C5' U A 548 -15.563 111.063 104.425 1.00 66.71 C
ATOM 7 C4' U A 548 -16.539 110.595 103.369 1.00 66.38 C
ATOM 8 O4' U A 548 -16.522 111.515 102.243 1.00 66.20 O
ATOM 9 C3' U A 548 -16.266 109.246 102.725 1.00 65.38 C
ATOM 10 O3' U A 548 -16.685 108.141 103.514 1.00 63.95 O
ATOM 11 C2' U A 548 -17.069 109.350 101.440 1.00 65.86 C
ATOM 12 O2' U A 548 -18.450 109.159 101.653 1.00 65.15 O
ATOM 13 C1' U A 548 -16.797 110.802 101.041 1.00 66.99 C
ATOM 14 N1 U A 548 -15.626 110.892 100.150 1.00 68.78 N
ATOM 15 C2 U A 548 -15.820 110.648 98.795 1.00 69.05 C
ATOM 16 O2 U A 548 -16.919 110.413 98.307 1.00 70.03 O
ATOM 17 N3 U A 548 -14.677 110.686 98.033 1.00 69.71 N
ATOM 18 C4 U A 548 -13.392 110.945 98.467 1.00 69.09 C
ATOM 19 O4 U A 548 -12.462 110.909 97.661 1.00 67.98 O
ATOM 20 C5 U A 548 -13.277 111.212 99.867 1.00 69.18 C
ATOM 21 C6 U A 548 -14.366 111.182 100.640 1.00 68.93 C
ATOM 22 P G A 549 -15.987 106.707 103.300 1.00 63.93 P
ATOM 23 OP1 G A 549 -16.545 105.760 104.297 1.00 63.47 O
ATOM 24 OP2 G A 549 -14.516 106.919 103.235 1.00 63.18 O
ATOM 25 O5' G A 549 -16.469 106.253 101.850 1.00 60.64 O
TER
ATOM 1 O3' C B 546 -8.850 116.509 103.074 1.00 73.63 O
ATOM 2 P U B 547 -9.249 114.962 103.311 1.00 75.50 P
ATOM 3 OP1 U B 547 -8.396 114.438 104.406 1.00 74.87 O
ATOM 4 OP2 U B 547 -9.273 114.257 102.002 1.00 74.17 O
ATOM 5 O5' U B 547 -10.754 115.024 103.835 1.00 75.81 O
ATOM 6 C5' U B 547 -11.750 115.723 103.077 1.00 75.38 C
ATOM 7 C4' U B 547 -13.137 115.455 103.605 1.00 75.11 C
ATOM 8 O4' U B 547 -14.066 116.193 102.763 1.00 76.15 O
ATOM 9 C3' U B 547 -13.594 114.001 103.547 1.00 74.19 C
ATOM 10 O3' U B 547 -13.356 113.312 104.770 1.00 71.21 O
ATOM 11 C2' U B 547 -15.070 114.120 103.194 1.00 75.49 C
ATOM 12 O2' U B 547 -15.879 114.431 104.310 1.00 75.00 O
ATOM 13 C1' U B 547 -15.039 115.312 102.237 1.00 76.98 C
ATOM 14 N1 U B 547 -14.651 114.963 100.858 1.00 78.03 N
ATOM 15 C2 U B 547 -15.656 114.833 99.918 1.00 80.32 C
ATOM 16 O2 U B 547 -16.837 115.013 100.176 1.00 83.00 O
ATOM 17 N3 U B 547 -15.230 114.483 98.660 1.00 81.19 N
ATOM 18 C4 U B 547 -13.929 114.260 98.253 1.00 80.89 C
ATOM 19 O4 U B 547 -13.707 113.896 97.094 1.00 80.48 O
ATOM 20 C5 U B 547 -12.950 114.429 99.276 1.00 79.82 C
ATOM 21 C6 U B 547 -13.332 114.764 100.508 1.00 78.67 C
ATOM 22 P U B 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 23 OP1 U B 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 24 OP2 U B 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 25 O5' U B 548 -14.224 111.098 103.903 1.00 68.22 O
TER
ATOM 2 P U A 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 3 OP1 U A 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 4 OP2 U A 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 5 O5' U A 548 -14.224 111.098 103.903 1.00 68.22 O
ATOM 6 C5' U A 548 -15.563 111.063 104.425 1.00 66.71 C
ATOM 7 C4' U A 548 -16.539 110.595 103.369 1.00 66.38 C
ATOM 8 O4' U A 548 -16.522 111.515 102.243 1.00 66.20 O
ATOM 9 C3' U A 548 -16.266 109.246 102.725 1.00 65.38 C
ATOM 10 O3' U A 548 -16.685 108.141 103.514 1.00 63.95 O
ATOM 11 C2' U A 548 -17.069 109.350 101.440 1.00 65.86 C
ATOM 12 O2' U A 548 -18.450 109.159 101.653 1.00 65.15 O
ATOM 13 C1' U A 548 -16.797 110.802 101.041 1.00 66.99 C
ATOM 14 N1 U A 548 -15.626 110.892 100.150 1.00 68.78 N
ATOM 15 C2 U A 548 -15.820 110.648 98.795 1.00 69.05 C
ATOM 16 O2 U A 548 -16.919 110.413 98.307 1.00 70.03 O
ATOM 17 N3 U A 548 -14.677 110.686 98.033 1.00 69.71 N
ATOM 18 C4 U A 548 -13.392 110.945 98.467 1.00 69.09 C
ATOM 19 O4 U A 548 -12.462 110.909 97.661 1.00 67.98 O
ATOM 20 C5 U A 548 -13.277 111.212 99.867 1.00 69.18 C
ATOM 21 C6 U A 548 -14.366 111.182 100.640 1.00 68.93 C
ATOM 22 P G A 549 -15.987 106.707 103.300 1.00 63.93 P
ATOM 23 OP1 G A 549 -16.545 105.760 104.297 1.00 63.47 O
ATOM 24 OP2 G A 549 -14.516 106.919 103.235 1.00 63.18 O
ATOM 25 O5' G A 549 -16.469 106.253 101.850 1.00 60.64 O
TER
ATOM 1 O3' C B 546 -8.850 116.509 103.074 1.00 73.63 O
ATOM 2 P U B 547 -9.249 114.962 103.311 1.00 75.50 P
ATOM 3 OP1 U B 547 -8.396 114.438 104.406 1.00 74.87 O
ATOM 4 OP2 U B 547 -9.273 114.257 102.002 1.00 74.17 O
ATOM 5 O5' U B 547 -10.754 115.024 103.835 1.00 75.81 O
ATOM 6 C5' U B 547 -11.750 115.723 103.077 1.00 75.38 C
ATOM 7 C4' U B 547 -13.137 115.455 103.605 1.00 75.11 C
ATOM 8 O4' U B 547 -14.066 116.193 102.763 1.00 76.15 O
ATOM 9 C3' U B 547 -13.594 114.001 103.547 1.00 74.19 C
ATOM 10 O3' U B 547 -13.356 113.312 104.770 1.00 71.21 O
ATOM 11 C2' U B 547 -15.070 114.120 103.194 1.00 75.49 C
ATOM 12 O2' U B 547 -15.879 114.431 104.310 1.00 75.00 O
ATOM 13 C1' U B 547 -15.039 115.312 102.237 1.00 76.98 C
ATOM 14 N1 U B 547 -14.651 114.963 100.858 1.00 78.03 N
ATOM 15 C2 U B 547 -15.656 114.833 99.918 1.00 80.32 C
ATOM 16 O2 U B 547 -16.837 115.013 100.176 1.00 83.00 O
ATOM 17 N3 U B 547 -15.230 114.483 98.660 1.00 81.19 N
ATOM 18 C4 U B 547 -13.929 114.260 98.253 1.00 80.89 C
ATOM 19 O4 U B 547 -13.707 113.896 97.094 1.00 80.48 O
ATOM 20 C5 U B 547 -12.950 114.429 99.276 1.00 79.82 C
ATOM 21 C6 U B 547 -13.332 114.764 100.508 1.00 78.67 C
ATOM 22 P U B 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 23 OP1 U B 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 24 OP2 U B 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 25 O5' U B 548 -14.224 111.098 103.903 1.00 68.22 O
TER
Atoms:
C4: (-13.392,110.945,98.467)
N3: (-14.677,110.686,98.033)
OP1: (-13.148,111.251,106.147)
OP2: (-11.760,111.529,104.010)
C2: (-15.820,110.648,98.795)
C1': (-16.797,110.802,101.041)
C3': (-16.266,109.246,102.725)
O5': (-14.224,111.098,103.903)
O4': (-16.522,111.515,102.243)
C5': (-15.563,111.063,104.425)
P: (-13.033,111.736,104.751)
C4': (-16.539,110.595,103.369)
C2': (-17.069,109.350,101.440)
O2': (-18.450,109.159,101.653)
N1: (-15.626,110.892,100.150)
O4: (-12.462,110.909,97.661)
O2: (-16.919,110.413,98.307)
C6: (-14.366,111.182,100.640)
C5: (-13.277,111.212,99.867)
O3': (-16.685,108.141,103.514)
N3: (-14.677,110.686,98.033)
OP1: (-13.148,111.251,106.147)
OP2: (-11.760,111.529,104.010)
C2: (-15.820,110.648,98.795)
C1': (-16.797,110.802,101.041)
C3': (-16.266,109.246,102.725)
O5': (-14.224,111.098,103.903)
O4': (-16.522,111.515,102.243)
C5': (-15.563,111.063,104.425)
P: (-13.033,111.736,104.751)
C4': (-16.539,110.595,103.369)
C2': (-17.069,109.350,101.440)
O2': (-18.450,109.159,101.653)
N1: (-15.626,110.892,100.150)
O4: (-12.462,110.909,97.661)
O2: (-16.919,110.413,98.307)
C6: (-14.366,111.182,100.640)
C5: (-13.277,111.212,99.867)
O3': (-16.685,108.141,103.514)
C4: (-13.929,114.260,98.253)
N3: (-15.230,114.483,98.660)
OP1: (-8.396,114.438,104.406)
OP2: (-9.273,114.257,102.002)
C2: (-15.656,114.833,99.918)
C1': (-15.039,115.312,102.237)
C3': (-13.594,114.001,103.547)
O5': (-10.754,115.024,103.835)
O4': (-14.066,116.193,102.763)
C5': (-11.750,115.723,103.077)
P: (-9.249,114.962,103.311)
C4': (-13.137,115.455,103.605)
C2': (-15.070,114.120,103.194)
O2': (-15.879,114.431,104.310)
N1: (-14.651,114.963,100.858)
O4: (-13.707,113.896,97.094)
O2: (-16.837,115.013,100.176)
C6: (-13.332,114.764,100.508)
C5: (-12.950,114.429,99.276)
O3': (-13.356,113.312,104.770)
N3: (-15.230,114.483,98.660)
OP1: (-8.396,114.438,104.406)
OP2: (-9.273,114.257,102.002)
C2: (-15.656,114.833,99.918)
C1': (-15.039,115.312,102.237)
C3': (-13.594,114.001,103.547)
O5': (-10.754,115.024,103.835)
O4': (-14.066,116.193,102.763)
C5': (-11.750,115.723,103.077)
P: (-9.249,114.962,103.311)
C4': (-13.137,115.455,103.605)
C2': (-15.070,114.120,103.194)
O2': (-15.879,114.431,104.310)
N1: (-14.651,114.963,100.858)
O4: (-13.707,113.896,97.094)
O2: (-16.837,115.013,100.176)
C6: (-13.332,114.764,100.508)
C5: (-12.950,114.429,99.276)
O3': (-13.356,113.312,104.770)
Image (generated by PyMOL):