Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:C26:C28
Extra
PDB:
ATOM 1 O3' G A 25 -36.666 -35.346 5.402 1.00 23.18 O
ATOM 2 P U A 26 -38.087 -34.678 5.120 1.00 21.94 P
ATOM 3 OP1 U A 26 -39.130 -35.334 5.946 1.00 28.11 O
ATOM 4 OP2 U A 26 -38.247 -34.615 3.646 1.00 22.95 O
ATOM 5 O5' U A 26 -37.899 -33.196 5.655 1.00 24.74 O
ATOM 6 C5' U A 26 -38.215 -32.088 4.827 1.00 24.78 C
ATOM 7 C4' U A 26 -37.135 -31.045 4.923 1.00 23.08 C
ATOM 8 O4' U A 26 -35.842 -31.705 4.857 1.00 22.71 O
ATOM 9 C3' U A 26 -37.137 -30.032 3.787 1.00 23.43 C
ATOM 10 O3' U A 26 -36.577 -28.804 4.250 1.00 22.98 O
ATOM 11 C2' U A 26 -36.181 -30.678 2.789 1.00 23.08 C
ATOM 12 O2' U A 26 -35.608 -29.772 1.869 1.00 26.86 O
ATOM 13 C1' U A 26 -35.125 -31.220 3.745 1.00 23.30 C
ATOM 14 N1 U A 26 -34.264 -32.294 3.241 1.00 22.81 N
ATOM 15 C2 U A 26 -33.016 -31.941 2.768 1.00 21.49 C
ATOM 16 O2 U A 26 -32.615 -30.789 2.732 1.00 31.96 O
ATOM 17 N3 U A 26 -32.247 -32.984 2.335 1.00 22.52 N
ATOM 18 C4 U A 26 -32.584 -34.315 2.314 1.00 21.09 C
ATOM 19 O4 U A 26 -31.794 -35.131 1.825 1.00 19.98 O
ATOM 20 C5 U A 26 -33.891 -34.602 2.820 1.00 19.72 C
ATOM 21 C6 U A 26 -34.668 -33.602 3.252 1.00 23.91 C
ATOM 22 P G A 27 -37.447 -27.802 5.169 1.00 22.54 P
ATOM 23 OP1 G A 27 -38.828 -28.338 5.315 1.00 21.47 O
ATOM 24 OP2 G A 27 -37.250 -26.419 4.630 1.00 18.97 O
ATOM 25 O5' G A 27 -36.712 -27.883 6.583 1.00 18.44 O
TER
ATOM 1 O3' G B 27 -35.367 -24.679 7.882 1.00 11.90 O
ATOM 2 P C B 28 -34.765 -23.858 6.645 1.00 12.71 P
ATOM 3 OP1 C B 28 -35.075 -22.425 6.852 1.00 8.15 O
ATOM 4 OP2 C B 28 -35.200 -24.537 5.390 1.00 6.75 O
ATOM 5 O5' C B 28 -33.201 -24.006 6.866 1.00 8.99 O
ATOM 6 C5' C B 28 -32.611 -23.403 7.999 1.00 10.61 C
ATOM 7 C4' C B 28 -31.133 -23.672 8.044 1.00 12.45 C
ATOM 8 O4' C B 28 -30.855 -25.050 8.376 1.00 12.52 O
ATOM 9 C3' C B 28 -30.372 -23.458 6.752 1.00 13.64 C
ATOM 10 O3' C B 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 11 C2' C B 28 -29.086 -24.207 7.026 1.00 12.91 C
ATOM 12 O2' C B 28 -28.284 -23.446 7.885 1.00 12.43 O
ATOM 13 C1' C B 28 -29.607 -25.414 7.810 1.00 12.89 C
ATOM 14 N1 C B 28 -29.818 -26.585 6.962 1.00 15.50 N
ATOM 15 C2 C B 28 -28.781 -27.494 6.823 1.00 15.37 C
ATOM 16 O2 C B 28 -27.700 -27.254 7.389 1.00 17.62 O
ATOM 17 N3 C B 28 -28.972 -28.600 6.072 1.00 14.16 N
ATOM 18 C4 C B 28 -30.138 -28.792 5.459 1.00 14.61 C
ATOM 19 N4 C B 28 -30.285 -29.889 4.728 1.00 19.43 N
ATOM 20 C5 C B 28 -31.206 -27.865 5.568 1.00 15.46 C
ATOM 21 C6 C B 28 -31.008 -26.787 6.323 1.00 15.90 C
ATOM 22 P G B 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 23 OP1 G B 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 24 OP2 G B 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 25 O5' G B 29 -30.432 -22.421 4.076 1.00 17.19 O
TER
ATOM 2 P U A 26 -38.087 -34.678 5.120 1.00 21.94 P
ATOM 3 OP1 U A 26 -39.130 -35.334 5.946 1.00 28.11 O
ATOM 4 OP2 U A 26 -38.247 -34.615 3.646 1.00 22.95 O
ATOM 5 O5' U A 26 -37.899 -33.196 5.655 1.00 24.74 O
ATOM 6 C5' U A 26 -38.215 -32.088 4.827 1.00 24.78 C
ATOM 7 C4' U A 26 -37.135 -31.045 4.923 1.00 23.08 C
ATOM 8 O4' U A 26 -35.842 -31.705 4.857 1.00 22.71 O
ATOM 9 C3' U A 26 -37.137 -30.032 3.787 1.00 23.43 C
ATOM 10 O3' U A 26 -36.577 -28.804 4.250 1.00 22.98 O
ATOM 11 C2' U A 26 -36.181 -30.678 2.789 1.00 23.08 C
ATOM 12 O2' U A 26 -35.608 -29.772 1.869 1.00 26.86 O
ATOM 13 C1' U A 26 -35.125 -31.220 3.745 1.00 23.30 C
ATOM 14 N1 U A 26 -34.264 -32.294 3.241 1.00 22.81 N
ATOM 15 C2 U A 26 -33.016 -31.941 2.768 1.00 21.49 C
ATOM 16 O2 U A 26 -32.615 -30.789 2.732 1.00 31.96 O
ATOM 17 N3 U A 26 -32.247 -32.984 2.335 1.00 22.52 N
ATOM 18 C4 U A 26 -32.584 -34.315 2.314 1.00 21.09 C
ATOM 19 O4 U A 26 -31.794 -35.131 1.825 1.00 19.98 O
ATOM 20 C5 U A 26 -33.891 -34.602 2.820 1.00 19.72 C
ATOM 21 C6 U A 26 -34.668 -33.602 3.252 1.00 23.91 C
ATOM 22 P G A 27 -37.447 -27.802 5.169 1.00 22.54 P
ATOM 23 OP1 G A 27 -38.828 -28.338 5.315 1.00 21.47 O
ATOM 24 OP2 G A 27 -37.250 -26.419 4.630 1.00 18.97 O
ATOM 25 O5' G A 27 -36.712 -27.883 6.583 1.00 18.44 O
TER
ATOM 1 O3' G B 27 -35.367 -24.679 7.882 1.00 11.90 O
ATOM 2 P C B 28 -34.765 -23.858 6.645 1.00 12.71 P
ATOM 3 OP1 C B 28 -35.075 -22.425 6.852 1.00 8.15 O
ATOM 4 OP2 C B 28 -35.200 -24.537 5.390 1.00 6.75 O
ATOM 5 O5' C B 28 -33.201 -24.006 6.866 1.00 8.99 O
ATOM 6 C5' C B 28 -32.611 -23.403 7.999 1.00 10.61 C
ATOM 7 C4' C B 28 -31.133 -23.672 8.044 1.00 12.45 C
ATOM 8 O4' C B 28 -30.855 -25.050 8.376 1.00 12.52 O
ATOM 9 C3' C B 28 -30.372 -23.458 6.752 1.00 13.64 C
ATOM 10 O3' C B 28 -30.114 -22.091 6.548 1.00 16.68 O
ATOM 11 C2' C B 28 -29.086 -24.207 7.026 1.00 12.91 C
ATOM 12 O2' C B 28 -28.284 -23.446 7.885 1.00 12.43 O
ATOM 13 C1' C B 28 -29.607 -25.414 7.810 1.00 12.89 C
ATOM 14 N1 C B 28 -29.818 -26.585 6.962 1.00 15.50 N
ATOM 15 C2 C B 28 -28.781 -27.494 6.823 1.00 15.37 C
ATOM 16 O2 C B 28 -27.700 -27.254 7.389 1.00 17.62 O
ATOM 17 N3 C B 28 -28.972 -28.600 6.072 1.00 14.16 N
ATOM 18 C4 C B 28 -30.138 -28.792 5.459 1.00 14.61 C
ATOM 19 N4 C B 28 -30.285 -29.889 4.728 1.00 19.43 N
ATOM 20 C5 C B 28 -31.206 -27.865 5.568 1.00 15.46 C
ATOM 21 C6 C B 28 -31.008 -26.787 6.323 1.00 15.90 C
ATOM 22 P G B 29 -29.552 -21.613 5.137 1.00 20.31 P
ATOM 23 OP1 G B 29 -28.163 -22.140 5.109 1.00 20.96 O
ATOM 24 OP2 G B 29 -29.796 -20.149 4.991 1.00 18.98 O
ATOM 25 O5' G B 29 -30.432 -22.421 4.076 1.00 17.19 O
TER
Atoms:
C4: (-32.584,-34.315,2.314)
N3: (-32.247,-32.984,2.335)
OP1: (-39.130,-35.334,5.946)
OP2: (-38.247,-34.615,3.646)
C2: (-33.016,-31.941,2.768)
C1': (-35.125,-31.220,3.745)
C3': (-37.137,-30.032,3.787)
O5': (-37.899,-33.196,5.655)
O4': (-35.842,-31.705,4.857)
C5': (-38.215,-32.088,4.827)
P: (-38.087,-34.678,5.120)
C4': (-37.135,-31.045,4.923)
C2': (-36.181,-30.678,2.789)
O2': (-35.608,-29.772,1.869)
N1: (-34.264,-32.294,3.241)
O4: (-31.794,-35.131,1.825)
O2: (-32.615,-30.789,2.732)
C6: (-34.668,-33.602,3.252)
C5: (-33.891,-34.602,2.820)
O3': (-36.577,-28.804,4.250)
N3: (-32.247,-32.984,2.335)
OP1: (-39.130,-35.334,5.946)
OP2: (-38.247,-34.615,3.646)
C2: (-33.016,-31.941,2.768)
C1': (-35.125,-31.220,3.745)
C3': (-37.137,-30.032,3.787)
O5': (-37.899,-33.196,5.655)
O4': (-35.842,-31.705,4.857)
C5': (-38.215,-32.088,4.827)
P: (-38.087,-34.678,5.120)
C4': (-37.135,-31.045,4.923)
C2': (-36.181,-30.678,2.789)
O2': (-35.608,-29.772,1.869)
N1: (-34.264,-32.294,3.241)
O4: (-31.794,-35.131,1.825)
O2: (-32.615,-30.789,2.732)
C6: (-34.668,-33.602,3.252)
C5: (-33.891,-34.602,2.820)
O3': (-36.577,-28.804,4.250)
C2: (-28.781,-27.494,6.823)
OP1: (-35.075,-22.425,6.852)
OP2: (-35.200,-24.537,5.390)
C4: (-30.138,-28.792,5.459)
O5': (-33.201,-24.006,6.866)
C3': (-30.372,-23.458,6.752)
C1': (-29.607,-25.414,7.810)
O4': (-30.855,-25.050,8.376)
C5': (-32.611,-23.403,7.999)
P: (-34.765,-23.858,6.645)
O2: (-27.700,-27.254,7.389)
C4': (-31.133,-23.672,8.044)
C2': (-29.086,-24.207,7.026)
O2': (-28.284,-23.446,7.885)
N1: (-29.818,-26.585,6.962)
N3: (-28.972,-28.600,6.072)
N4: (-30.285,-29.889,4.728)
C6: (-31.008,-26.787,6.323)
C5: (-31.206,-27.865,5.568)
O3': (-30.114,-22.091,6.548)
OP1: (-35.075,-22.425,6.852)
OP2: (-35.200,-24.537,5.390)
C4: (-30.138,-28.792,5.459)
O5': (-33.201,-24.006,6.866)
C3': (-30.372,-23.458,6.752)
C1': (-29.607,-25.414,7.810)
O4': (-30.855,-25.050,8.376)
C5': (-32.611,-23.403,7.999)
P: (-34.765,-23.858,6.645)
O2: (-27.700,-27.254,7.389)
C4': (-31.133,-23.672,8.044)
C2': (-29.086,-24.207,7.026)
O2': (-28.284,-23.446,7.885)
N1: (-29.818,-26.585,6.962)
N3: (-28.972,-28.600,6.072)
N4: (-30.285,-29.889,4.728)
C6: (-31.008,-26.787,6.323)
C5: (-31.206,-27.865,5.568)
O3': (-30.114,-22.091,6.548)
Image (generated by PyMOL):