Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A26:A28
Extra
PDB:
ATOM 1 O3' G A 25 24.989 -11.036 19.005 1.00 18.55 O
ATOM 2 P U A 26 24.825 -10.191 20.358 1.00 19.88 P
ATOM 3 OP1 U A 26 25.916 -10.469 21.335 1.00 22.12 O
ATOM 4 OP2 U A 26 23.414 -10.336 20.774 1.00 19.04 O
ATOM 5 O5' U A 26 25.057 -8.699 19.869 1.00 22.28 O
ATOM 6 C5' U A 26 24.021 -7.741 19.979 1.00 24.88 C
ATOM 7 C4' U A 26 24.093 -6.761 18.839 1.00 23.10 C
ATOM 8 O4' U A 26 24.198 -7.491 17.587 1.00 21.69 O
ATOM 9 C3' U A 26 22.858 -5.885 18.701 1.00 22.59 C
ATOM 10 O3' U A 26 23.240 -4.658 18.100 1.00 22.85 O
ATOM 11 C2' U A 26 22.016 -6.696 17.732 1.00 23.07 C
ATOM 12 O2' U A 26 21.038 -5.956 17.042 1.00 28.79 O
ATOM 13 C1' U A 26 23.096 -7.183 16.774 1.00 23.11 C
ATOM 14 N1 U A 26 22.717 -8.388 16.038 1.00 23.18 N
ATOM 15 C2 U A 26 22.054 -8.221 14.853 1.00 22.74 C
ATOM 16 O2 U A 26 21.820 -7.131 14.377 1.00 31.70 O
ATOM 17 N3 U A 26 21.676 -9.375 14.232 1.00 24.77 N
ATOM 18 C4 U A 26 21.898 -10.654 14.664 1.00 23.99 C
ATOM 19 O4 U A 26 21.398 -11.590 14.046 1.00 25.01 O
ATOM 20 C5 U A 26 22.625 -10.747 15.885 1.00 23.21 C
ATOM 21 C6 U A 26 23.000 -9.632 16.517 1.00 25.49 C
ATOM 22 P G A 27 24.067 -3.566 18.946 1.00 24.14 P
ATOM 23 OP1 G A 27 24.442 -4.138 20.257 1.00 27.12 O
ATOM 24 OP2 G A 27 23.309 -2.290 18.902 1.00 27.03 O
ATOM 25 O5' G A 27 25.395 -3.371 18.087 1.00 24.46 O
TER
ATOM 1 O3' G B 27 26.153 -0.116 16.435 1.00 30.93 O
ATOM 2 P C B 28 24.817 0.454 15.765 1.00 30.85 P
ATOM 3 OP1 C B 28 24.818 1.915 16.045 1.00 29.97 O
ATOM 4 OP2 C B 28 23.675 -0.382 16.216 1.00 32.87 O
ATOM 5 O5' C B 28 25.055 0.191 14.216 1.00 25.08 O
ATOM 6 C5' C B 28 26.099 0.871 13.547 1.00 25.81 C
ATOM 7 C4' C B 28 26.189 0.418 12.120 1.00 26.26 C
ATOM 8 O4' C B 28 26.690 -0.936 12.061 1.00 25.30 O
ATOM 9 C3' C B 28 24.873 0.346 11.370 1.00 26.92 C
ATOM 10 O3' C B 28 24.425 1.611 10.914 1.00 29.40 O
ATOM 11 C2' C B 28 25.221 -0.570 10.211 1.00 26.13 C
ATOM 12 O2' C B 28 25.812 0.124 9.133 1.00 25.60 O
ATOM 13 C1' C B 28 26.202 -1.546 10.882 1.00 25.25 C
ATOM 14 N1 C B 28 25.519 -2.781 11.252 1.00 26.04 N
ATOM 15 C2 C B 28 25.457 -3.809 10.304 1.00 28.40 C
ATOM 16 O2 C B 28 26.042 -3.659 9.215 1.00 27.82 O
ATOM 17 N3 C B 28 24.766 -4.931 10.591 1.00 28.88 N
ATOM 18 C4 C B 28 24.150 -5.048 11.764 1.00 27.49 C
ATOM 19 N4 C B 28 23.441 -6.153 11.972 1.00 31.03 N
ATOM 20 C5 C B 28 24.226 -4.029 12.768 1.00 25.29 C
ATOM 21 C6 C B 28 24.920 -2.925 12.473 1.00 24.84 C
ATOM 22 P G B 29 22.947 1.750 10.303 1.00 32.96 P
ATOM 23 OP1 G B 29 22.945 1.058 8.975 1.00 31.12 O
ATOM 24 OP2 G B 29 22.577 3.182 10.392 1.00 33.28 O
ATOM 25 O5' G B 29 22.031 0.934 11.324 1.00 31.33 O
TER
ATOM 2 P U A 26 24.825 -10.191 20.358 1.00 19.88 P
ATOM 3 OP1 U A 26 25.916 -10.469 21.335 1.00 22.12 O
ATOM 4 OP2 U A 26 23.414 -10.336 20.774 1.00 19.04 O
ATOM 5 O5' U A 26 25.057 -8.699 19.869 1.00 22.28 O
ATOM 6 C5' U A 26 24.021 -7.741 19.979 1.00 24.88 C
ATOM 7 C4' U A 26 24.093 -6.761 18.839 1.00 23.10 C
ATOM 8 O4' U A 26 24.198 -7.491 17.587 1.00 21.69 O
ATOM 9 C3' U A 26 22.858 -5.885 18.701 1.00 22.59 C
ATOM 10 O3' U A 26 23.240 -4.658 18.100 1.00 22.85 O
ATOM 11 C2' U A 26 22.016 -6.696 17.732 1.00 23.07 C
ATOM 12 O2' U A 26 21.038 -5.956 17.042 1.00 28.79 O
ATOM 13 C1' U A 26 23.096 -7.183 16.774 1.00 23.11 C
ATOM 14 N1 U A 26 22.717 -8.388 16.038 1.00 23.18 N
ATOM 15 C2 U A 26 22.054 -8.221 14.853 1.00 22.74 C
ATOM 16 O2 U A 26 21.820 -7.131 14.377 1.00 31.70 O
ATOM 17 N3 U A 26 21.676 -9.375 14.232 1.00 24.77 N
ATOM 18 C4 U A 26 21.898 -10.654 14.664 1.00 23.99 C
ATOM 19 O4 U A 26 21.398 -11.590 14.046 1.00 25.01 O
ATOM 20 C5 U A 26 22.625 -10.747 15.885 1.00 23.21 C
ATOM 21 C6 U A 26 23.000 -9.632 16.517 1.00 25.49 C
ATOM 22 P G A 27 24.067 -3.566 18.946 1.00 24.14 P
ATOM 23 OP1 G A 27 24.442 -4.138 20.257 1.00 27.12 O
ATOM 24 OP2 G A 27 23.309 -2.290 18.902 1.00 27.03 O
ATOM 25 O5' G A 27 25.395 -3.371 18.087 1.00 24.46 O
TER
ATOM 1 O3' G B 27 26.153 -0.116 16.435 1.00 30.93 O
ATOM 2 P C B 28 24.817 0.454 15.765 1.00 30.85 P
ATOM 3 OP1 C B 28 24.818 1.915 16.045 1.00 29.97 O
ATOM 4 OP2 C B 28 23.675 -0.382 16.216 1.00 32.87 O
ATOM 5 O5' C B 28 25.055 0.191 14.216 1.00 25.08 O
ATOM 6 C5' C B 28 26.099 0.871 13.547 1.00 25.81 C
ATOM 7 C4' C B 28 26.189 0.418 12.120 1.00 26.26 C
ATOM 8 O4' C B 28 26.690 -0.936 12.061 1.00 25.30 O
ATOM 9 C3' C B 28 24.873 0.346 11.370 1.00 26.92 C
ATOM 10 O3' C B 28 24.425 1.611 10.914 1.00 29.40 O
ATOM 11 C2' C B 28 25.221 -0.570 10.211 1.00 26.13 C
ATOM 12 O2' C B 28 25.812 0.124 9.133 1.00 25.60 O
ATOM 13 C1' C B 28 26.202 -1.546 10.882 1.00 25.25 C
ATOM 14 N1 C B 28 25.519 -2.781 11.252 1.00 26.04 N
ATOM 15 C2 C B 28 25.457 -3.809 10.304 1.00 28.40 C
ATOM 16 O2 C B 28 26.042 -3.659 9.215 1.00 27.82 O
ATOM 17 N3 C B 28 24.766 -4.931 10.591 1.00 28.88 N
ATOM 18 C4 C B 28 24.150 -5.048 11.764 1.00 27.49 C
ATOM 19 N4 C B 28 23.441 -6.153 11.972 1.00 31.03 N
ATOM 20 C5 C B 28 24.226 -4.029 12.768 1.00 25.29 C
ATOM 21 C6 C B 28 24.920 -2.925 12.473 1.00 24.84 C
ATOM 22 P G B 29 22.947 1.750 10.303 1.00 32.96 P
ATOM 23 OP1 G B 29 22.945 1.058 8.975 1.00 31.12 O
ATOM 24 OP2 G B 29 22.577 3.182 10.392 1.00 33.28 O
ATOM 25 O5' G B 29 22.031 0.934 11.324 1.00 31.33 O
TER
Atoms:
C4: (21.898,-10.654,14.664)
N3: (21.676,-9.375,14.232)
OP1: (25.916,-10.469,21.335)
OP2: (23.414,-10.336,20.774)
C2: (22.054,-8.221,14.853)
C1': (23.096,-7.183,16.774)
C3': (22.858,-5.885,18.701)
O5': (25.057,-8.699,19.869)
O4': (24.198,-7.491,17.587)
C5': (24.021,-7.741,19.979)
P: (24.825,-10.191,20.358)
C4': (24.093,-6.761,18.839)
C2': (22.016,-6.696,17.732)
O2': (21.038,-5.956,17.042)
N1: (22.717,-8.388,16.038)
O4: (21.398,-11.590,14.046)
O2: (21.820,-7.131,14.377)
C6: (23.000,-9.632,16.517)
C5: (22.625,-10.747,15.885)
O3': (23.240,-4.658,18.100)
N3: (21.676,-9.375,14.232)
OP1: (25.916,-10.469,21.335)
OP2: (23.414,-10.336,20.774)
C2: (22.054,-8.221,14.853)
C1': (23.096,-7.183,16.774)
C3': (22.858,-5.885,18.701)
O5': (25.057,-8.699,19.869)
O4': (24.198,-7.491,17.587)
C5': (24.021,-7.741,19.979)
P: (24.825,-10.191,20.358)
C4': (24.093,-6.761,18.839)
C2': (22.016,-6.696,17.732)
O2': (21.038,-5.956,17.042)
N1: (22.717,-8.388,16.038)
O4: (21.398,-11.590,14.046)
O2: (21.820,-7.131,14.377)
C6: (23.000,-9.632,16.517)
C5: (22.625,-10.747,15.885)
O3': (23.240,-4.658,18.100)
C2: (25.457,-3.809,10.304)
OP1: (24.818,1.915,16.045)
OP2: (23.675,-0.382,16.216)
C4: (24.150,-5.048,11.764)
O5': (25.055,0.191,14.216)
C3': (24.873,0.346,11.370)
C1': (26.202,-1.546,10.882)
O4': (26.690,-0.936,12.061)
C5': (26.099,0.871,13.547)
P: (24.817,0.454,15.765)
O2: (26.042,-3.659,9.215)
C4': (26.189,0.418,12.120)
C2': (25.221,-0.570,10.211)
O2': (25.812,0.124,9.133)
N1: (25.519,-2.781,11.252)
N3: (24.766,-4.931,10.591)
N4: (23.441,-6.153,11.972)
C6: (24.920,-2.925,12.473)
C5: (24.226,-4.029,12.768)
O3': (24.425,1.611,10.914)
OP1: (24.818,1.915,16.045)
OP2: (23.675,-0.382,16.216)
C4: (24.150,-5.048,11.764)
O5': (25.055,0.191,14.216)
C3': (24.873,0.346,11.370)
C1': (26.202,-1.546,10.882)
O4': (26.690,-0.936,12.061)
C5': (26.099,0.871,13.547)
P: (24.817,0.454,15.765)
O2: (26.042,-3.659,9.215)
C4': (26.189,0.418,12.120)
C2': (25.221,-0.570,10.211)
O2': (25.812,0.124,9.133)
N1: (25.519,-2.781,11.252)
N3: (24.766,-4.931,10.591)
N4: (23.441,-6.153,11.972)
C6: (24.920,-2.925,12.473)
C5: (24.226,-4.029,12.768)
O3': (24.425,1.611,10.914)
Image (generated by PyMOL):