Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YZD:C7:C6
Extra
PDB:
ATOM 1 O3' U A 6 31.394 38.767 21.626 1.00 21.84 O
ATOM 2 P U A 7 30.527 38.779 22.973 1.00 21.64 P
ATOM 3 OP1 U A 7 31.393 39.340 24.045 1.00 22.88 O
ATOM 4 OP2 U A 7 29.948 37.420 23.127 1.00 26.16 O
ATOM 5 O5' U A 7 29.360 39.817 22.680 1.00 22.75 O
ATOM 6 C5' U A 7 29.678 41.171 22.430 1.00 23.11 C
ATOM 7 C4' U A 7 28.475 41.909 21.921 1.00 24.29 C
ATOM 8 O4' U A 7 28.100 41.390 20.622 1.00 25.13 O
ATOM 9 C3' U A 7 27.206 41.774 22.736 1.00 23.04 C
ATOM 10 O3' U A 7 27.224 42.625 23.863 1.00 24.59 O
ATOM 11 C2' U A 7 26.157 42.174 21.717 1.00 24.17 C
ATOM 12 O2' U A 7 26.121 43.576 21.499 1.00 23.58 O
ATOM 13 C1' U A 7 26.696 41.467 20.471 1.00 24.04 C
ATOM 14 N1 U A 7 26.193 40.096 20.343 1.00 22.95 N
ATOM 15 C2 U A 7 24.970 39.924 19.745 1.00 23.46 C
ATOM 16 O2 U A 7 24.300 40.864 19.342 1.00 24.23 O
ATOM 17 N3 U A 7 24.558 38.617 19.636 1.00 20.79 N
ATOM 18 C4 U A 7 25.235 37.496 20.065 1.00 20.20 C
ATOM 19 O4 U A 7 24.762 36.384 19.840 1.00 21.10 O
ATOM 20 C5 U A 7 26.494 37.760 20.693 1.00 20.21 C
ATOM 21 C6 U A 7 26.922 39.020 20.804 1.00 23.02 C
ATOM 22 P A A 8 26.634 42.095 25.258 1.00 25.35 P
ATOM 23 OP1 A A 8 27.074 43.068 26.291 1.00 28.02 O
ATOM 24 OP2 A A 8 26.975 40.657 25.415 1.00 26.33 O
ATOM 25 O5' A A 8 25.067 42.260 25.045 1.00 27.34 O
TER
ATOM 1 P U B 6 32.041 33.692 20.420 1.00 24.58 P
ATOM 2 OP1 U B 6 32.977 33.635 21.562 1.00 24.09 O
ATOM 3 OP2 U B 6 30.794 32.903 20.451 1.00 28.31 O
ATOM 4 O5' U B 6 31.654 35.212 20.153 1.00 24.66 O
ATOM 5 C5' U B 6 32.664 36.210 20.101 1.00 23.36 C
ATOM 6 C4' U B 6 32.079 37.524 19.663 1.00 22.17 C
ATOM 7 O4' U B 6 31.486 37.350 18.351 1.00 20.51 O
ATOM 8 C3' U B 6 30.925 38.052 20.502 1.00 22.08 C
ATOM 9 O3' U B 6 31.394 38.767 21.626 1.00 21.84 O
ATOM 10 C2' U B 6 30.259 38.995 19.524 1.00 21.45 C
ATOM 11 O2' U B 6 31.043 40.159 19.366 1.00 20.51 O
ATOM 12 C1' U B 6 30.340 38.175 18.241 1.00 20.90 C
ATOM 13 N1 U B 6 29.163 37.324 18.008 1.00 22.02 N
ATOM 14 C2 U B 6 28.048 37.939 17.461 1.00 21.12 C
ATOM 15 O2 U B 6 28.004 39.130 17.231 1.00 22.45 O
ATOM 16 N3 U B 6 26.990 37.111 17.203 1.00 16.62 N
ATOM 17 C4 U B 6 26.916 35.769 17.455 1.00 18.39 C
ATOM 18 O4 U B 6 25.861 35.181 17.231 1.00 20.63 O
ATOM 19 C5 U B 6 28.097 35.199 18.040 1.00 18.79 C
ATOM 20 C6 U B 6 29.154 35.977 18.292 1.00 18.58 C
ATOM 21 P U B 7 30.527 38.779 22.973 1.00 21.64 P
ATOM 22 OP1 U B 7 31.393 39.340 24.045 1.00 22.88 O
ATOM 23 OP2 U B 7 29.948 37.420 23.127 1.00 26.16 O
ATOM 24 O5' U B 7 29.360 39.817 22.680 1.00 22.75 O
TER
ATOM 2 P U A 7 30.527 38.779 22.973 1.00 21.64 P
ATOM 3 OP1 U A 7 31.393 39.340 24.045 1.00 22.88 O
ATOM 4 OP2 U A 7 29.948 37.420 23.127 1.00 26.16 O
ATOM 5 O5' U A 7 29.360 39.817 22.680 1.00 22.75 O
ATOM 6 C5' U A 7 29.678 41.171 22.430 1.00 23.11 C
ATOM 7 C4' U A 7 28.475 41.909 21.921 1.00 24.29 C
ATOM 8 O4' U A 7 28.100 41.390 20.622 1.00 25.13 O
ATOM 9 C3' U A 7 27.206 41.774 22.736 1.00 23.04 C
ATOM 10 O3' U A 7 27.224 42.625 23.863 1.00 24.59 O
ATOM 11 C2' U A 7 26.157 42.174 21.717 1.00 24.17 C
ATOM 12 O2' U A 7 26.121 43.576 21.499 1.00 23.58 O
ATOM 13 C1' U A 7 26.696 41.467 20.471 1.00 24.04 C
ATOM 14 N1 U A 7 26.193 40.096 20.343 1.00 22.95 N
ATOM 15 C2 U A 7 24.970 39.924 19.745 1.00 23.46 C
ATOM 16 O2 U A 7 24.300 40.864 19.342 1.00 24.23 O
ATOM 17 N3 U A 7 24.558 38.617 19.636 1.00 20.79 N
ATOM 18 C4 U A 7 25.235 37.496 20.065 1.00 20.20 C
ATOM 19 O4 U A 7 24.762 36.384 19.840 1.00 21.10 O
ATOM 20 C5 U A 7 26.494 37.760 20.693 1.00 20.21 C
ATOM 21 C6 U A 7 26.922 39.020 20.804 1.00 23.02 C
ATOM 22 P A A 8 26.634 42.095 25.258 1.00 25.35 P
ATOM 23 OP1 A A 8 27.074 43.068 26.291 1.00 28.02 O
ATOM 24 OP2 A A 8 26.975 40.657 25.415 1.00 26.33 O
ATOM 25 O5' A A 8 25.067 42.260 25.045 1.00 27.34 O
TER
ATOM 1 P U B 6 32.041 33.692 20.420 1.00 24.58 P
ATOM 2 OP1 U B 6 32.977 33.635 21.562 1.00 24.09 O
ATOM 3 OP2 U B 6 30.794 32.903 20.451 1.00 28.31 O
ATOM 4 O5' U B 6 31.654 35.212 20.153 1.00 24.66 O
ATOM 5 C5' U B 6 32.664 36.210 20.101 1.00 23.36 C
ATOM 6 C4' U B 6 32.079 37.524 19.663 1.00 22.17 C
ATOM 7 O4' U B 6 31.486 37.350 18.351 1.00 20.51 O
ATOM 8 C3' U B 6 30.925 38.052 20.502 1.00 22.08 C
ATOM 9 O3' U B 6 31.394 38.767 21.626 1.00 21.84 O
ATOM 10 C2' U B 6 30.259 38.995 19.524 1.00 21.45 C
ATOM 11 O2' U B 6 31.043 40.159 19.366 1.00 20.51 O
ATOM 12 C1' U B 6 30.340 38.175 18.241 1.00 20.90 C
ATOM 13 N1 U B 6 29.163 37.324 18.008 1.00 22.02 N
ATOM 14 C2 U B 6 28.048 37.939 17.461 1.00 21.12 C
ATOM 15 O2 U B 6 28.004 39.130 17.231 1.00 22.45 O
ATOM 16 N3 U B 6 26.990 37.111 17.203 1.00 16.62 N
ATOM 17 C4 U B 6 26.916 35.769 17.455 1.00 18.39 C
ATOM 18 O4 U B 6 25.861 35.181 17.231 1.00 20.63 O
ATOM 19 C5 U B 6 28.097 35.199 18.040 1.00 18.79 C
ATOM 20 C6 U B 6 29.154 35.977 18.292 1.00 18.58 C
ATOM 21 P U B 7 30.527 38.779 22.973 1.00 21.64 P
ATOM 22 OP1 U B 7 31.393 39.340 24.045 1.00 22.88 O
ATOM 23 OP2 U B 7 29.948 37.420 23.127 1.00 26.16 O
ATOM 24 O5' U B 7 29.360 39.817 22.680 1.00 22.75 O
TER
Atoms:
C4: (25.235,37.496,20.065)
N3: (24.558,38.617,19.636)
OP1: (31.393,39.340,24.045)
OP2: (29.948,37.420,23.127)
C2: (24.970,39.924,19.745)
C1': (26.696,41.467,20.471)
C3': (27.206,41.774,22.736)
O5': (29.360,39.817,22.680)
O4': (28.100,41.390,20.622)
C5': (29.678,41.171,22.430)
P: (30.527,38.779,22.973)
C4': (28.475,41.909,21.921)
C2': (26.157,42.174,21.717)
O2': (26.121,43.576,21.499)
N1: (26.193,40.096,20.343)
O4: (24.762,36.384,19.840)
O2: (24.300,40.864,19.342)
C6: (26.922,39.020,20.804)
C5: (26.494,37.760,20.693)
O3': (27.224,42.625,23.863)
N3: (24.558,38.617,19.636)
OP1: (31.393,39.340,24.045)
OP2: (29.948,37.420,23.127)
C2: (24.970,39.924,19.745)
C1': (26.696,41.467,20.471)
C3': (27.206,41.774,22.736)
O5': (29.360,39.817,22.680)
O4': (28.100,41.390,20.622)
C5': (29.678,41.171,22.430)
P: (30.527,38.779,22.973)
C4': (28.475,41.909,21.921)
C2': (26.157,42.174,21.717)
O2': (26.121,43.576,21.499)
N1: (26.193,40.096,20.343)
O4: (24.762,36.384,19.840)
O2: (24.300,40.864,19.342)
C6: (26.922,39.020,20.804)
C5: (26.494,37.760,20.693)
O3': (27.224,42.625,23.863)
C4: (26.916,35.769,17.455)
N3: (26.990,37.111,17.203)
OP1: (32.977,33.635,21.562)
OP2: (30.794,32.903,20.451)
C2: (28.048,37.939,17.461)
C1': (30.340,38.175,18.241)
C3': (30.925,38.052,20.502)
O5': (31.654,35.212,20.153)
O4': (31.486,37.350,18.351)
C5': (32.664,36.210,20.101)
P: (32.041,33.692,20.420)
C4': (32.079,37.524,19.663)
C2': (30.259,38.995,19.524)
O2': (31.043,40.159,19.366)
N1: (29.163,37.324,18.008)
O4: (25.861,35.181,17.231)
O2: (28.004,39.130,17.231)
C6: (29.154,35.977,18.292)
C5: (28.097,35.199,18.040)
O3': (31.394,38.767,21.626)
N3: (26.990,37.111,17.203)
OP1: (32.977,33.635,21.562)
OP2: (30.794,32.903,20.451)
C2: (28.048,37.939,17.461)
C1': (30.340,38.175,18.241)
C3': (30.925,38.052,20.502)
O5': (31.654,35.212,20.153)
O4': (31.486,37.350,18.351)
C5': (32.664,36.210,20.101)
P: (32.041,33.692,20.420)
C4': (32.079,37.524,19.663)
C2': (30.259,38.995,19.524)
O2': (31.043,40.159,19.366)
N1: (29.163,37.324,18.008)
O4: (25.861,35.181,17.231)
O2: (28.004,39.130,17.231)
C6: (29.154,35.977,18.292)
C5: (28.097,35.199,18.040)
O3': (31.394,38.767,21.626)
Image (generated by PyMOL):