Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A488:A520
Extra
PDB:
ATOM 1 O3' A A 487 -101.965 40.194 -51.986 1.00 14.04 O
ATOM 2 P A A 488 -103.177 40.946 -52.719 1.00 23.69 P
ATOM 3 OP1 A A 488 -102.583 41.671 -53.883 1.00 21.62 O
ATOM 4 OP2 A A 488 -103.931 41.698 -51.705 1.00 19.55 O
ATOM 5 O5' A A 488 -104.147 39.795 -53.229 1.00 25.00 O
ATOM 6 C5' A A 488 -104.966 40.000 -54.395 1.00 27.25 C
ATOM 7 C4' A A 488 -105.519 38.691 -54.885 1.00 28.80 C
ATOM 8 O4' A A 488 -104.438 37.748 -55.083 1.00 29.34 O
ATOM 9 C3' A A 488 -106.455 38.025 -53.901 1.00 29.62 C
ATOM 10 O3' A A 488 -107.770 38.481 -54.156 1.00 31.31 O
ATOM 11 C2' A A 488 -106.313 36.549 -54.250 1.00 30.05 C
ATOM 12 O2' A A 488 -107.074 36.215 -55.395 1.00 30.85 O
ATOM 13 C1' A A 488 -104.841 36.458 -54.646 1.00 30.26 C
ATOM 14 N9 A A 488 -103.934 36.019 -53.574 1.00 39.49 N
ATOM 15 C8 A A 488 -103.646 36.655 -52.390 1.00 39.76 C
ATOM 16 N7 A A 488 -102.711 36.064 -51.687 1.00 39.06 N
ATOM 17 C5 A A 488 -102.376 34.956 -52.447 1.00 39.08 C
ATOM 18 C6 A A 488 -101.430 33.949 -52.266 1.00 38.57 C
ATOM 19 N6 A A 488 -100.588 33.902 -51.237 1.00 40.10 N
ATOM 20 N1 A A 488 -101.363 32.982 -53.195 1.00 38.70 N
ATOM 21 C2 A A 488 -102.187 33.043 -54.236 1.00 39.54 C
ATOM 22 N3 A A 488 -103.102 33.947 -54.530 1.00 39.70 N
ATOM 23 C4 A A 488 -103.147 34.894 -53.588 1.00 39.51 C
ATOM 24 P C A 489 -108.396 39.656 -53.269 1.00 67.53 P
ATOM 25 OP1 C A 489 -108.617 40.797 -54.177 1.00 28.58 O
ATOM 26 OP2 C A 489 -107.575 39.840 -52.041 1.00 29.16 O
ATOM 27 O5' C A 489 -109.844 39.109 -52.915 1.00 34.30 O
TER
ATOM 1 O3' G B 519 -113.026 35.817 -62.077 1.00 6.62 O
ATOM 2 P G B 520 -111.565 35.877 -62.744 1.00 37.22 P
ATOM 3 OP1 G B 520 -111.496 37.062 -63.651 1.00 52.44 O
ATOM 4 OP2 G B 520 -111.258 34.531 -63.286 1.00 50.87 O
ATOM 5 O5' G B 520 -110.600 36.154 -61.507 1.00 9.56 O
ATOM 6 C5' G B 520 -110.621 37.416 -60.817 1.00 7.48 C
ATOM 7 C4' G B 520 -109.562 37.441 -59.743 1.00 5.42 C
ATOM 8 O4' G B 520 -109.824 36.369 -58.802 1.00 5.14 O
ATOM 9 C3' G B 520 -108.141 37.200 -60.215 1.00 4.28 C
ATOM 10 O3' G B 520 -107.502 38.396 -60.621 1.00 2.00 O
ATOM 11 C2' G B 520 -107.465 36.637 -58.978 1.00 4.95 C
ATOM 12 O2' G B 520 -107.031 37.656 -58.107 1.00 5.43 O
ATOM 13 C1' G B 520 -108.598 35.848 -58.316 1.00 4.81 C
ATOM 14 N9 G B 520 -108.535 34.412 -58.599 1.00 41.30 N
ATOM 15 C8 G B 520 -109.347 33.686 -59.436 1.00 41.45 C
ATOM 16 N7 G B 520 -109.007 32.429 -59.517 1.00 41.11 N
ATOM 17 C5 G B 520 -107.911 32.316 -58.677 1.00 42.28 C
ATOM 18 C6 G B 520 -107.109 31.199 -58.373 1.00 43.29 C
ATOM 19 O6 G B 520 -107.203 30.043 -58.805 1.00 45.08 O
ATOM 20 N1 G B 520 -106.102 31.522 -57.473 1.00 43.34 N
ATOM 21 C2 G B 520 -105.895 32.759 -56.937 1.00 43.41 C
ATOM 22 N2 G B 520 -104.876 32.862 -56.087 1.00 44.40 N
ATOM 23 N3 G B 520 -106.633 33.813 -57.215 1.00 43.29 N
ATOM 24 C4 G B 520 -107.617 33.523 -58.088 1.00 42.30 C
ATOM 25 P C B 521 -106.129 38.309 -61.445 1.00 16.14 P
ATOM 26 OP1 C B 521 -105.651 39.662 -61.820 1.00 16.69 O
ATOM 27 OP2 C B 521 -106.328 37.286 -62.490 1.00 16.92 O
ATOM 28 O5' C B 521 -105.075 37.739 -60.409 1.00 13.85 O
TER
ATOM 2 P A A 488 -103.177 40.946 -52.719 1.00 23.69 P
ATOM 3 OP1 A A 488 -102.583 41.671 -53.883 1.00 21.62 O
ATOM 4 OP2 A A 488 -103.931 41.698 -51.705 1.00 19.55 O
ATOM 5 O5' A A 488 -104.147 39.795 -53.229 1.00 25.00 O
ATOM 6 C5' A A 488 -104.966 40.000 -54.395 1.00 27.25 C
ATOM 7 C4' A A 488 -105.519 38.691 -54.885 1.00 28.80 C
ATOM 8 O4' A A 488 -104.438 37.748 -55.083 1.00 29.34 O
ATOM 9 C3' A A 488 -106.455 38.025 -53.901 1.00 29.62 C
ATOM 10 O3' A A 488 -107.770 38.481 -54.156 1.00 31.31 O
ATOM 11 C2' A A 488 -106.313 36.549 -54.250 1.00 30.05 C
ATOM 12 O2' A A 488 -107.074 36.215 -55.395 1.00 30.85 O
ATOM 13 C1' A A 488 -104.841 36.458 -54.646 1.00 30.26 C
ATOM 14 N9 A A 488 -103.934 36.019 -53.574 1.00 39.49 N
ATOM 15 C8 A A 488 -103.646 36.655 -52.390 1.00 39.76 C
ATOM 16 N7 A A 488 -102.711 36.064 -51.687 1.00 39.06 N
ATOM 17 C5 A A 488 -102.376 34.956 -52.447 1.00 39.08 C
ATOM 18 C6 A A 488 -101.430 33.949 -52.266 1.00 38.57 C
ATOM 19 N6 A A 488 -100.588 33.902 -51.237 1.00 40.10 N
ATOM 20 N1 A A 488 -101.363 32.982 -53.195 1.00 38.70 N
ATOM 21 C2 A A 488 -102.187 33.043 -54.236 1.00 39.54 C
ATOM 22 N3 A A 488 -103.102 33.947 -54.530 1.00 39.70 N
ATOM 23 C4 A A 488 -103.147 34.894 -53.588 1.00 39.51 C
ATOM 24 P C A 489 -108.396 39.656 -53.269 1.00 67.53 P
ATOM 25 OP1 C A 489 -108.617 40.797 -54.177 1.00 28.58 O
ATOM 26 OP2 C A 489 -107.575 39.840 -52.041 1.00 29.16 O
ATOM 27 O5' C A 489 -109.844 39.109 -52.915 1.00 34.30 O
TER
ATOM 1 O3' G B 519 -113.026 35.817 -62.077 1.00 6.62 O
ATOM 2 P G B 520 -111.565 35.877 -62.744 1.00 37.22 P
ATOM 3 OP1 G B 520 -111.496 37.062 -63.651 1.00 52.44 O
ATOM 4 OP2 G B 520 -111.258 34.531 -63.286 1.00 50.87 O
ATOM 5 O5' G B 520 -110.600 36.154 -61.507 1.00 9.56 O
ATOM 6 C5' G B 520 -110.621 37.416 -60.817 1.00 7.48 C
ATOM 7 C4' G B 520 -109.562 37.441 -59.743 1.00 5.42 C
ATOM 8 O4' G B 520 -109.824 36.369 -58.802 1.00 5.14 O
ATOM 9 C3' G B 520 -108.141 37.200 -60.215 1.00 4.28 C
ATOM 10 O3' G B 520 -107.502 38.396 -60.621 1.00 2.00 O
ATOM 11 C2' G B 520 -107.465 36.637 -58.978 1.00 4.95 C
ATOM 12 O2' G B 520 -107.031 37.656 -58.107 1.00 5.43 O
ATOM 13 C1' G B 520 -108.598 35.848 -58.316 1.00 4.81 C
ATOM 14 N9 G B 520 -108.535 34.412 -58.599 1.00 41.30 N
ATOM 15 C8 G B 520 -109.347 33.686 -59.436 1.00 41.45 C
ATOM 16 N7 G B 520 -109.007 32.429 -59.517 1.00 41.11 N
ATOM 17 C5 G B 520 -107.911 32.316 -58.677 1.00 42.28 C
ATOM 18 C6 G B 520 -107.109 31.199 -58.373 1.00 43.29 C
ATOM 19 O6 G B 520 -107.203 30.043 -58.805 1.00 45.08 O
ATOM 20 N1 G B 520 -106.102 31.522 -57.473 1.00 43.34 N
ATOM 21 C2 G B 520 -105.895 32.759 -56.937 1.00 43.41 C
ATOM 22 N2 G B 520 -104.876 32.862 -56.087 1.00 44.40 N
ATOM 23 N3 G B 520 -106.633 33.813 -57.215 1.00 43.29 N
ATOM 24 C4 G B 520 -107.617 33.523 -58.088 1.00 42.30 C
ATOM 25 P C B 521 -106.129 38.309 -61.445 1.00 16.14 P
ATOM 26 OP1 C B 521 -105.651 39.662 -61.820 1.00 16.69 O
ATOM 27 OP2 C B 521 -106.328 37.286 -62.490 1.00 16.92 O
ATOM 28 O5' C B 521 -105.075 37.739 -60.409 1.00 13.85 O
TER
Atoms:
OP1: (-102.583,41.671,-53.883)
OP2: (-103.931,41.698,-51.705)
C3': (-106.455,38.025,-53.901)
C1': (-104.841,36.458,-54.646)
C5': (-104.966,40.000,-54.395)
O4': (-104.438,37.748,-55.083)
C8: (-103.646,36.655,-52.390)
O2': (-107.074,36.215,-55.395)
C6: (-101.430,33.949,-52.266)
C5: (-102.376,34.956,-52.447)
C4: (-103.147,34.894,-53.588)
P: (-103.177,40.946,-52.719)
C4': (-105.519,38.691,-54.885)
C2': (-106.313,36.549,-54.250)
C2: (-102.187,33.043,-54.236)
N1: (-101.363,32.982,-53.195)
N3: (-103.102,33.947,-54.530)
N6: (-100.588,33.902,-51.237)
N7: (-102.711,36.064,-51.687)
N9: (-103.934,36.019,-53.574)
O5': (-104.147,39.795,-53.229)
O3': (-107.770,38.481,-54.156)
OP2: (-103.931,41.698,-51.705)
C3': (-106.455,38.025,-53.901)
C1': (-104.841,36.458,-54.646)
C5': (-104.966,40.000,-54.395)
O4': (-104.438,37.748,-55.083)
C8: (-103.646,36.655,-52.390)
O2': (-107.074,36.215,-55.395)
C6: (-101.430,33.949,-52.266)
C5: (-102.376,34.956,-52.447)
C4: (-103.147,34.894,-53.588)
P: (-103.177,40.946,-52.719)
C4': (-105.519,38.691,-54.885)
C2': (-106.313,36.549,-54.250)
C2: (-102.187,33.043,-54.236)
N1: (-101.363,32.982,-53.195)
N3: (-103.102,33.947,-54.530)
N6: (-100.588,33.902,-51.237)
N7: (-102.711,36.064,-51.687)
N9: (-103.934,36.019,-53.574)
O5': (-104.147,39.795,-53.229)
O3': (-107.770,38.481,-54.156)
OP1: (-111.496,37.062,-63.651)
OP2: (-111.258,34.531,-63.286)
C3': (-108.141,37.200,-60.215)
C1': (-108.598,35.848,-58.316)
C5': (-110.621,37.416,-60.817)
O6: (-107.203,30.043,-58.805)
O4': (-109.824,36.369,-58.802)
C8: (-109.347,33.686,-59.436)
C2: (-105.895,32.759,-56.937)
C6: (-107.109,31.199,-58.373)
C5: (-107.911,32.316,-58.677)
C4: (-107.617,33.523,-58.088)
P: (-111.565,35.877,-62.744)
C4': (-109.562,37.441,-59.743)
C2': (-107.465,36.637,-58.978)
O2': (-107.031,37.656,-58.107)
N1: (-106.102,31.522,-57.473)
N2: (-104.876,32.862,-56.087)
N3: (-106.633,33.813,-57.215)
N7: (-109.007,32.429,-59.517)
N9: (-108.535,34.412,-58.599)
O5': (-110.600,36.154,-61.507)
O3': (-107.502,38.396,-60.621)
OP2: (-111.258,34.531,-63.286)
C3': (-108.141,37.200,-60.215)
C1': (-108.598,35.848,-58.316)
C5': (-110.621,37.416,-60.817)
O6: (-107.203,30.043,-58.805)
O4': (-109.824,36.369,-58.802)
C8: (-109.347,33.686,-59.436)
C2: (-105.895,32.759,-56.937)
C6: (-107.109,31.199,-58.373)
C5: (-107.911,32.316,-58.677)
C4: (-107.617,33.523,-58.088)
P: (-111.565,35.877,-62.744)
C4': (-109.562,37.441,-59.743)
C2': (-107.465,36.637,-58.978)
O2': (-107.031,37.656,-58.107)
N1: (-106.102,31.522,-57.473)
N2: (-104.876,32.862,-56.087)
N3: (-106.633,33.813,-57.215)
N7: (-109.007,32.429,-59.517)
N9: (-108.535,34.412,-58.599)
O5': (-110.600,36.154,-61.507)
O3': (-107.502,38.396,-60.621)
Image (generated by PyMOL):