ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A342:A345

Extra

PDB:
ATOM 1 O3' G A 341 137.302 52.458 2.904 1.00 47.11 O
ATOM 2 P C A 342 138.218 53.123 4.072 1.00 44.69 P
ATOM 3 OP1 C A 342 137.292 53.354 5.219 1.00 46.72 O
ATOM 4 OP2 C A 342 139.481 52.392 4.328 1.00 45.97 O
ATOM 5 O5' C A 342 138.617 54.523 3.522 1.00 44.27 O
ATOM 6 C5' C A 342 139.717 55.235 4.113 1.00 43.02 C
ATOM 7 C4' C A 342 139.229 56.153 5.209 1.00 41.46 C
ATOM 8 O4' C A 342 138.723 55.381 6.329 1.00 42.30 O
ATOM 9 C3' C A 342 140.314 57.019 5.817 1.00 41.09 C
ATOM 10 O3' C A 342 140.487 58.166 5.051 1.00 40.14 O
ATOM 11 C2' C A 342 139.760 57.340 7.193 1.00 41.46 C
ATOM 12 O2' C A 342 138.831 58.397 7.168 1.00 43.58 O
ATOM 13 C1' C A 342 139.039 56.041 7.546 1.00 42.65 C
ATOM 14 N1 C A 342 139.923 55.178 8.351 1.00 44.24 N
ATOM 15 C2 C A 342 140.235 55.577 9.665 1.00 45.74 C
ATOM 16 O2 C A 342 139.718 56.607 10.124 1.00 47.55 O
ATOM 17 N3 C A 342 141.088 54.834 10.396 1.00 47.30 N
ATOM 18 C4 C A 342 141.625 53.731 9.873 1.00 47.60 C
ATOM 19 N4 C A 342 142.486 53.046 10.628 1.00 48.28 N
ATOM 20 C5 C A 342 141.307 53.285 8.550 1.00 45.57 C
ATOM 21 C6 C A 342 140.458 54.029 7.835 1.00 43.69 C
ATOM 22 P A A 343 141.894 58.931 5.053 1.00 39.43 P
ATOM 23 OP1 A A 343 142.608 58.717 6.337 1.00 40.58 O
ATOM 24 OP2 A A 343 142.573 58.596 3.774 1.00 38.49 O
ATOM 25 O5' A A 343 141.424 60.443 5.081 1.00 38.49 O
TER

ATOM 1 O3' G B 344 134.899 62.695 9.465 1.00 36.81 O
ATOM 2 P C B 345 136.222 63.192 10.225 1.00 39.19 P
ATOM 3 OP1 C B 345 136.301 64.669 10.061 1.00 39.33 O
ATOM 4 OP2 C B 345 137.347 62.344 9.775 1.00 40.46 O
ATOM 5 O5' C B 345 135.941 62.861 11.755 1.00 40.21 O
ATOM 6 C5' C B 345 134.720 63.268 12.388 1.00 40.19 C
ATOM 7 C4' C B 345 134.599 62.626 13.744 1.00 41.26 C
ATOM 8 O4' C B 345 134.175 61.249 13.611 1.00 42.09 O
ATOM 9 C3' C B 345 135.886 62.546 14.545 1.00 41.89 C
ATOM 10 O3' C B 345 136.198 63.722 15.223 1.00 42.22 O
ATOM 11 C2' C B 345 135.622 61.399 15.502 1.00 42.61 C
ATOM 12 O2' C B 345 134.892 61.822 16.635 1.00 42.61 O
ATOM 13 C1' C B 345 134.786 60.464 14.628 1.00 43.65 C
ATOM 14 N1 C B 345 135.609 59.419 13.987 1.00 45.88 N
ATOM 15 C2 C B 345 135.971 58.290 14.730 1.00 46.72 C
ATOM 16 O2 C B 345 135.626 58.219 15.918 1.00 48.21 O
ATOM 17 N3 C B 345 136.692 57.309 14.134 1.00 47.04 N
ATOM 18 C4 C B 345 137.057 57.431 12.855 1.00 46.73 C
ATOM 19 N4 C B 345 137.750 56.437 12.297 1.00 45.42 N
ATOM 20 C5 C B 345 136.725 58.580 12.087 1.00 47.55 C
ATOM 21 C6 C B 345 136.007 59.540 12.684 1.00 46.59 C
ATOM 22 P A B 346 137.705 64.253 15.187 1.00 42.95 P
ATOM 23 OP1 A B 346 137.721 65.563 15.906 1.00 43.76 O
ATOM 24 OP2 A B 346 138.144 64.179 13.772 1.00 44.28 O
ATOM 25 O5' A B 346 138.512 63.158 16.033 1.00 43.34 O
TER

Atoms:
C2: (140.235,55.577,9.665)
OP1: (137.292,53.354,5.219)
OP2: (139.481,52.392,4.328)
C4: (141.625,53.731,9.873)
O5': (138.617,54.523,3.522)
C3': (140.314,57.019,5.817)
C1': (139.039,56.041,7.546)
O4': (138.723,55.381,6.329)
C5': (139.717,55.235,4.113)
P: (138.218,53.123,4.072)
O2: (139.718,56.607,10.124)
C4': (139.229,56.153,5.209)
C2': (139.760,57.340,7.193)
O2': (138.831,58.397,7.168)
N1: (139.923,55.178,8.351)
N3: (141.088,54.834,10.396)
N4: (142.486,53.046,10.628)
C6: (140.458,54.029,7.835)
C5: (141.307,53.285,8.550)
O3': (140.487,58.166,5.051)
C2: (135.971,58.290,14.730)
OP1: (136.301,64.669,10.061)
OP2: (137.347,62.344,9.775)
C4: (137.057,57.431,12.855)
O5': (135.941,62.861,11.755)
C3': (135.886,62.546,14.545)
C1': (134.786,60.464,14.628)
O4': (134.175,61.249,13.611)
C5': (134.720,63.268,12.388)
P: (136.222,63.192,10.225)
O2: (135.626,58.219,15.918)
C4': (134.599,62.626,13.744)
C2': (135.622,61.399,15.502)
O2': (134.892,61.822,16.635)
N1: (135.609,59.419,13.987)
N3: (136.692,57.309,14.134)
N4: (137.750,56.437,12.297)
C6: (136.007,59.540,12.684)
C5: (136.725,58.580,12.087)
O3': (136.198,63.722,15.223)
Image (generated by PyMOL):
PyMOL image
show in jmol