Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1378:A1380
Extra
PDB:
ATOM 1 O3' G A1377 -108.461 49.698 16.743 1.00 43.97 O
ATOM 2 P U A1378 -108.076 49.961 15.208 1.00 43.07 P
ATOM 3 OP1 U A1378 -106.663 50.427 15.180 1.00 43.07 O
ATOM 4 OP2 U A1378 -109.130 50.842 14.631 1.00 43.07 O
ATOM 5 O5' U A1378 -108.181 48.503 14.580 1.00 43.07 O
ATOM 6 C5' U A1378 -107.313 47.460 15.009 1.00 43.07 C
ATOM 7 C4' U A1378 -107.338 46.308 14.051 1.00 43.07 C
ATOM 8 O4' U A1378 -108.677 45.751 14.027 1.00 43.07 O
ATOM 9 C3' U A1378 -107.014 46.676 12.609 1.00 43.07 C
ATOM 10 O3' U A1378 -106.301 45.613 11.996 1.00 43.07 O
ATOM 11 C2' U A1378 -108.390 46.817 11.974 1.00 43.07 C
ATOM 12 O2' U A1378 -108.422 46.630 10.575 1.00 43.07 O
ATOM 13 C1' U A1378 -109.159 45.738 12.700 1.00 43.07 C
ATOM 14 N1 U A1378 -110.604 45.961 12.724 1.00 42.38 N
ATOM 15 C2 U A1378 -111.331 45.215 11.826 1.00 42.38 C
ATOM 16 O2 U A1378 -110.824 44.410 11.063 1.00 42.38 O
ATOM 17 N3 U A1378 -112.674 45.442 11.851 1.00 42.38 N
ATOM 18 C4 U A1378 -113.333 46.321 12.660 1.00 42.38 C
ATOM 19 O4 U A1378 -114.550 46.399 12.550 1.00 42.38 O
ATOM 20 C5 U A1378 -112.507 47.063 13.556 1.00 42.38 C
ATOM 21 C6 U A1378 -111.191 46.864 13.555 1.00 42.38 C
ATOM 22 P U A1379 -104.765 45.379 12.374 1.00 52.46 P
ATOM 23 OP1 U A1379 -104.493 46.182 13.596 1.00 52.46 O
ATOM 24 OP2 U A1379 -103.964 45.645 11.148 1.00 52.46 O
ATOM 25 O5' U A1379 -104.720 43.828 12.726 1.00 52.46 O
TER
ATOM 1 O3' U B1379 -103.625 40.135 12.009 1.00 52.46 O
ATOM 2 P C B1380 -104.194 39.968 10.519 1.00 47.40 P
ATOM 3 OP1 C B1380 -103.016 39.719 9.635 1.00 47.40 O
ATOM 4 OP2 C B1380 -105.074 41.148 10.247 1.00 47.40 O
ATOM 5 O5' C B1380 -105.085 38.643 10.630 1.00 47.40 O
ATOM 6 C5' C B1380 -104.564 37.455 11.209 1.00 47.40 C
ATOM 7 C4' C B1380 -105.653 36.618 11.829 1.00 47.40 C
ATOM 8 O4' C B1380 -106.286 37.345 12.910 1.00 47.40 O
ATOM 9 C3' C B1380 -106.812 36.238 10.921 1.00 47.40 C
ATOM 10 O3' C B1380 -106.511 35.154 10.072 1.00 47.40 O
ATOM 11 C2' C B1380 -107.918 35.931 11.913 1.00 47.40 C
ATOM 12 O2' C B1380 -107.757 34.630 12.459 1.00 47.40 O
ATOM 13 C1' C B1380 -107.642 36.963 13.006 1.00 47.40 C
ATOM 14 N1 C B1380 -108.475 38.154 12.851 1.00 46.62 N
ATOM 15 C2 C B1380 -109.811 38.060 13.211 1.00 46.62 C
ATOM 16 O2 C B1380 -110.221 36.973 13.637 1.00 46.62 O
ATOM 17 N3 C B1380 -110.608 39.146 13.084 1.00 46.62 N
ATOM 18 C4 C B1380 -110.110 40.290 12.621 1.00 46.62 C
ATOM 19 N4 C B1380 -110.921 41.344 12.512 1.00 46.62 N
ATOM 20 C5 C B1380 -108.743 40.402 12.245 1.00 46.62 C
ATOM 21 C6 C B1380 -107.966 39.318 12.371 1.00 46.62 C
ATOM 22 P C B1381 -106.433 35.380 8.491 1.00 34.57 P
ATOM 23 OP1 C B1381 -105.295 34.576 7.990 1.00 34.57 O
ATOM 24 OP2 C B1381 -106.426 36.847 8.266 1.00 34.57 O
ATOM 25 O5' C B1381 -107.799 34.753 7.973 1.00 34.57 O
TER
ATOM 2 P U A1378 -108.076 49.961 15.208 1.00 43.07 P
ATOM 3 OP1 U A1378 -106.663 50.427 15.180 1.00 43.07 O
ATOM 4 OP2 U A1378 -109.130 50.842 14.631 1.00 43.07 O
ATOM 5 O5' U A1378 -108.181 48.503 14.580 1.00 43.07 O
ATOM 6 C5' U A1378 -107.313 47.460 15.009 1.00 43.07 C
ATOM 7 C4' U A1378 -107.338 46.308 14.051 1.00 43.07 C
ATOM 8 O4' U A1378 -108.677 45.751 14.027 1.00 43.07 O
ATOM 9 C3' U A1378 -107.014 46.676 12.609 1.00 43.07 C
ATOM 10 O3' U A1378 -106.301 45.613 11.996 1.00 43.07 O
ATOM 11 C2' U A1378 -108.390 46.817 11.974 1.00 43.07 C
ATOM 12 O2' U A1378 -108.422 46.630 10.575 1.00 43.07 O
ATOM 13 C1' U A1378 -109.159 45.738 12.700 1.00 43.07 C
ATOM 14 N1 U A1378 -110.604 45.961 12.724 1.00 42.38 N
ATOM 15 C2 U A1378 -111.331 45.215 11.826 1.00 42.38 C
ATOM 16 O2 U A1378 -110.824 44.410 11.063 1.00 42.38 O
ATOM 17 N3 U A1378 -112.674 45.442 11.851 1.00 42.38 N
ATOM 18 C4 U A1378 -113.333 46.321 12.660 1.00 42.38 C
ATOM 19 O4 U A1378 -114.550 46.399 12.550 1.00 42.38 O
ATOM 20 C5 U A1378 -112.507 47.063 13.556 1.00 42.38 C
ATOM 21 C6 U A1378 -111.191 46.864 13.555 1.00 42.38 C
ATOM 22 P U A1379 -104.765 45.379 12.374 1.00 52.46 P
ATOM 23 OP1 U A1379 -104.493 46.182 13.596 1.00 52.46 O
ATOM 24 OP2 U A1379 -103.964 45.645 11.148 1.00 52.46 O
ATOM 25 O5' U A1379 -104.720 43.828 12.726 1.00 52.46 O
TER
ATOM 1 O3' U B1379 -103.625 40.135 12.009 1.00 52.46 O
ATOM 2 P C B1380 -104.194 39.968 10.519 1.00 47.40 P
ATOM 3 OP1 C B1380 -103.016 39.719 9.635 1.00 47.40 O
ATOM 4 OP2 C B1380 -105.074 41.148 10.247 1.00 47.40 O
ATOM 5 O5' C B1380 -105.085 38.643 10.630 1.00 47.40 O
ATOM 6 C5' C B1380 -104.564 37.455 11.209 1.00 47.40 C
ATOM 7 C4' C B1380 -105.653 36.618 11.829 1.00 47.40 C
ATOM 8 O4' C B1380 -106.286 37.345 12.910 1.00 47.40 O
ATOM 9 C3' C B1380 -106.812 36.238 10.921 1.00 47.40 C
ATOM 10 O3' C B1380 -106.511 35.154 10.072 1.00 47.40 O
ATOM 11 C2' C B1380 -107.918 35.931 11.913 1.00 47.40 C
ATOM 12 O2' C B1380 -107.757 34.630 12.459 1.00 47.40 O
ATOM 13 C1' C B1380 -107.642 36.963 13.006 1.00 47.40 C
ATOM 14 N1 C B1380 -108.475 38.154 12.851 1.00 46.62 N
ATOM 15 C2 C B1380 -109.811 38.060 13.211 1.00 46.62 C
ATOM 16 O2 C B1380 -110.221 36.973 13.637 1.00 46.62 O
ATOM 17 N3 C B1380 -110.608 39.146 13.084 1.00 46.62 N
ATOM 18 C4 C B1380 -110.110 40.290 12.621 1.00 46.62 C
ATOM 19 N4 C B1380 -110.921 41.344 12.512 1.00 46.62 N
ATOM 20 C5 C B1380 -108.743 40.402 12.245 1.00 46.62 C
ATOM 21 C6 C B1380 -107.966 39.318 12.371 1.00 46.62 C
ATOM 22 P C B1381 -106.433 35.380 8.491 1.00 34.57 P
ATOM 23 OP1 C B1381 -105.295 34.576 7.990 1.00 34.57 O
ATOM 24 OP2 C B1381 -106.426 36.847 8.266 1.00 34.57 O
ATOM 25 O5' C B1381 -107.799 34.753 7.973 1.00 34.57 O
TER
Atoms:
C4: (-113.333,46.321,12.660)
N3: (-112.674,45.442,11.851)
OP1: (-106.663,50.427,15.180)
OP2: (-109.130,50.842,14.631)
C2: (-111.331,45.215,11.826)
C1': (-109.159,45.738,12.700)
C3': (-107.014,46.676,12.609)
O5': (-108.181,48.503,14.580)
O4': (-108.677,45.751,14.027)
C5': (-107.313,47.460,15.009)
P: (-108.076,49.961,15.208)
C4': (-107.338,46.308,14.051)
C2': (-108.390,46.817,11.974)
O2': (-108.422,46.630,10.575)
N1: (-110.604,45.961,12.724)
O4: (-114.550,46.399,12.550)
O2: (-110.824,44.410,11.063)
C6: (-111.191,46.864,13.555)
C5: (-112.507,47.063,13.556)
O3': (-106.301,45.613,11.996)
N3: (-112.674,45.442,11.851)
OP1: (-106.663,50.427,15.180)
OP2: (-109.130,50.842,14.631)
C2: (-111.331,45.215,11.826)
C1': (-109.159,45.738,12.700)
C3': (-107.014,46.676,12.609)
O5': (-108.181,48.503,14.580)
O4': (-108.677,45.751,14.027)
C5': (-107.313,47.460,15.009)
P: (-108.076,49.961,15.208)
C4': (-107.338,46.308,14.051)
C2': (-108.390,46.817,11.974)
O2': (-108.422,46.630,10.575)
N1: (-110.604,45.961,12.724)
O4: (-114.550,46.399,12.550)
O2: (-110.824,44.410,11.063)
C6: (-111.191,46.864,13.555)
C5: (-112.507,47.063,13.556)
O3': (-106.301,45.613,11.996)
C2: (-109.811,38.060,13.211)
OP1: (-103.016,39.719,9.635)
OP2: (-105.074,41.148,10.247)
C4: (-110.110,40.290,12.621)
O5': (-105.085,38.643,10.630)
C3': (-106.812,36.238,10.921)
C1': (-107.642,36.963,13.006)
O4': (-106.286,37.345,12.910)
C5': (-104.564,37.455,11.209)
P: (-104.194,39.968,10.519)
O2: (-110.221,36.973,13.637)
C4': (-105.653,36.618,11.829)
C2': (-107.918,35.931,11.913)
O2': (-107.757,34.630,12.459)
N1: (-108.475,38.154,12.851)
N3: (-110.608,39.146,13.084)
N4: (-110.921,41.344,12.512)
C6: (-107.966,39.318,12.371)
C5: (-108.743,40.402,12.245)
O3': (-106.511,35.154,10.072)
OP1: (-103.016,39.719,9.635)
OP2: (-105.074,41.148,10.247)
C4: (-110.110,40.290,12.621)
O5': (-105.085,38.643,10.630)
C3': (-106.812,36.238,10.921)
C1': (-107.642,36.963,13.006)
O4': (-106.286,37.345,12.910)
C5': (-104.564,37.455,11.209)
P: (-104.194,39.968,10.519)
O2: (-110.221,36.973,13.637)
C4': (-105.653,36.618,11.829)
C2': (-107.918,35.931,11.913)
O2': (-107.757,34.630,12.459)
N1: (-108.475,38.154,12.851)
N3: (-110.608,39.146,13.084)
N4: (-110.921,41.344,12.512)
C6: (-107.966,39.318,12.371)
C5: (-108.743,40.402,12.245)
O3': (-106.511,35.154,10.072)
Image (generated by PyMOL):