Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1378:A1380
Extra
PDB:
ATOM 1 O3' G A1377 -55.371 128.942 51.203 1.00 37.57 O
ATOM 2 P U A1378 -54.870 127.423 51.284 1.00 54.48 P
ATOM 3 OP1 U A1378 -53.386 127.450 51.347 1.00 54.48 O
ATOM 4 OP2 U A1378 -55.520 126.671 50.180 1.00 54.48 O
ATOM 5 O5' U A1378 -55.464 126.959 52.672 1.00 54.48 O
ATOM 6 C5' U A1378 -54.887 127.404 53.886 1.00 54.48 C
ATOM 7 C4' U A1378 -55.034 126.364 54.944 1.00 54.48 C
ATOM 8 O4' U A1378 -56.446 126.216 55.238 1.00 54.48 O
ATOM 9 C3' U A1378 -54.537 124.978 54.539 1.00 54.48 C
ATOM 10 O3' U A1378 -54.030 124.295 55.687 1.00 54.48 O
ATOM 11 C2' U A1378 -55.810 124.304 54.046 1.00 54.48 C
ATOM 12 O2' U A1378 -55.784 122.894 54.088 1.00 54.48 O
ATOM 13 C1' U A1378 -56.841 124.884 55.006 1.00 54.48 C
ATOM 14 N1 U A1378 -58.213 124.902 54.491 1.00 53.78 N
ATOM 15 C2 U A1378 -59.098 124.138 55.202 1.00 53.78 C
ATOM 16 O2 U A1378 -58.773 123.469 56.175 1.00 53.78 O
ATOM 17 N3 U A1378 -60.373 124.172 54.730 1.00 53.78 N
ATOM 18 C4 U A1378 -60.841 124.878 53.658 1.00 53.78 C
ATOM 19 O4 U A1378 -62.033 124.772 53.396 1.00 53.78 O
ATOM 20 C5 U A1378 -59.865 125.665 52.972 1.00 53.78 C
ATOM 21 C6 U A1378 -58.605 125.652 53.415 1.00 53.78 C
ATOM 22 P U A1379 -52.509 124.530 56.163 1.00 50.15 P
ATOM 23 OP1 U A1379 -51.851 125.356 55.115 1.00 50.15 O
ATOM 24 OP2 U A1379 -51.937 123.193 56.472 1.00 50.15 O
ATOM 25 O5' U A1379 -52.687 125.383 57.514 1.00 50.15 O
TER
ATOM 1 O3' U B1379 -52.448 124.301 61.189 1.00 50.15 O
ATOM 2 P C B1380 -53.391 123.128 61.774 1.00 41.29 P
ATOM 3 OP1 C B1380 -52.537 122.276 62.638 1.00 41.29 O
ATOM 4 OP2 C B1380 -54.080 122.503 60.616 1.00 41.29 O
ATOM 5 O5' C B1380 -54.443 123.918 62.670 1.00 41.29 O
ATOM 6 C5' C B1380 -54.137 124.283 64.004 1.00 41.29 C
ATOM 7 C4' C B1380 -55.386 124.606 64.762 1.00 41.29 C
ATOM 8 O4' C B1380 -56.037 125.738 64.143 1.00 41.29 O
ATOM 9 C3' C B1380 -56.438 123.504 64.768 1.00 41.29 C
ATOM 10 O3' C B1380 -56.252 122.589 65.823 1.00 41.29 O
ATOM 11 C2' C B1380 -57.749 124.255 64.864 1.00 41.29 C
ATOM 12 O2' C B1380 -58.069 124.548 66.212 1.00 41.29 O
ATOM 13 C1' C B1380 -57.431 125.552 64.130 1.00 41.29 C
ATOM 14 N1 C B1380 -57.877 125.512 62.733 1.00 41.21 N
ATOM 15 C2 C B1380 -59.252 125.655 62.486 1.00 41.21 C
ATOM 16 O2 C B1380 -60.041 125.797 63.443 1.00 41.21 O
ATOM 17 N3 C B1380 -59.682 125.639 61.205 1.00 41.21 N
ATOM 18 C4 C B1380 -58.797 125.488 60.220 1.00 41.21 C
ATOM 19 N4 C B1380 -59.291 125.483 58.986 1.00 41.21 N
ATOM 20 C5 C B1380 -57.392 125.334 60.444 1.00 41.21 C
ATOM 21 C6 C B1380 -56.973 125.358 61.713 1.00 41.21 C
ATOM 22 P C B1381 -56.149 121.022 65.522 1.00 30.88 P
ATOM 23 OP1 C B1381 -55.090 120.479 66.413 1.00 30.88 O
ATOM 24 OP2 C B1381 -55.993 120.873 64.033 1.00 30.88 O
ATOM 25 O5' C B1381 -57.578 120.477 65.986 1.00 30.88 O
TER
ATOM 2 P U A1378 -54.870 127.423 51.284 1.00 54.48 P
ATOM 3 OP1 U A1378 -53.386 127.450 51.347 1.00 54.48 O
ATOM 4 OP2 U A1378 -55.520 126.671 50.180 1.00 54.48 O
ATOM 5 O5' U A1378 -55.464 126.959 52.672 1.00 54.48 O
ATOM 6 C5' U A1378 -54.887 127.404 53.886 1.00 54.48 C
ATOM 7 C4' U A1378 -55.034 126.364 54.944 1.00 54.48 C
ATOM 8 O4' U A1378 -56.446 126.216 55.238 1.00 54.48 O
ATOM 9 C3' U A1378 -54.537 124.978 54.539 1.00 54.48 C
ATOM 10 O3' U A1378 -54.030 124.295 55.687 1.00 54.48 O
ATOM 11 C2' U A1378 -55.810 124.304 54.046 1.00 54.48 C
ATOM 12 O2' U A1378 -55.784 122.894 54.088 1.00 54.48 O
ATOM 13 C1' U A1378 -56.841 124.884 55.006 1.00 54.48 C
ATOM 14 N1 U A1378 -58.213 124.902 54.491 1.00 53.78 N
ATOM 15 C2 U A1378 -59.098 124.138 55.202 1.00 53.78 C
ATOM 16 O2 U A1378 -58.773 123.469 56.175 1.00 53.78 O
ATOM 17 N3 U A1378 -60.373 124.172 54.730 1.00 53.78 N
ATOM 18 C4 U A1378 -60.841 124.878 53.658 1.00 53.78 C
ATOM 19 O4 U A1378 -62.033 124.772 53.396 1.00 53.78 O
ATOM 20 C5 U A1378 -59.865 125.665 52.972 1.00 53.78 C
ATOM 21 C6 U A1378 -58.605 125.652 53.415 1.00 53.78 C
ATOM 22 P U A1379 -52.509 124.530 56.163 1.00 50.15 P
ATOM 23 OP1 U A1379 -51.851 125.356 55.115 1.00 50.15 O
ATOM 24 OP2 U A1379 -51.937 123.193 56.472 1.00 50.15 O
ATOM 25 O5' U A1379 -52.687 125.383 57.514 1.00 50.15 O
TER
ATOM 1 O3' U B1379 -52.448 124.301 61.189 1.00 50.15 O
ATOM 2 P C B1380 -53.391 123.128 61.774 1.00 41.29 P
ATOM 3 OP1 C B1380 -52.537 122.276 62.638 1.00 41.29 O
ATOM 4 OP2 C B1380 -54.080 122.503 60.616 1.00 41.29 O
ATOM 5 O5' C B1380 -54.443 123.918 62.670 1.00 41.29 O
ATOM 6 C5' C B1380 -54.137 124.283 64.004 1.00 41.29 C
ATOM 7 C4' C B1380 -55.386 124.606 64.762 1.00 41.29 C
ATOM 8 O4' C B1380 -56.037 125.738 64.143 1.00 41.29 O
ATOM 9 C3' C B1380 -56.438 123.504 64.768 1.00 41.29 C
ATOM 10 O3' C B1380 -56.252 122.589 65.823 1.00 41.29 O
ATOM 11 C2' C B1380 -57.749 124.255 64.864 1.00 41.29 C
ATOM 12 O2' C B1380 -58.069 124.548 66.212 1.00 41.29 O
ATOM 13 C1' C B1380 -57.431 125.552 64.130 1.00 41.29 C
ATOM 14 N1 C B1380 -57.877 125.512 62.733 1.00 41.21 N
ATOM 15 C2 C B1380 -59.252 125.655 62.486 1.00 41.21 C
ATOM 16 O2 C B1380 -60.041 125.797 63.443 1.00 41.21 O
ATOM 17 N3 C B1380 -59.682 125.639 61.205 1.00 41.21 N
ATOM 18 C4 C B1380 -58.797 125.488 60.220 1.00 41.21 C
ATOM 19 N4 C B1380 -59.291 125.483 58.986 1.00 41.21 N
ATOM 20 C5 C B1380 -57.392 125.334 60.444 1.00 41.21 C
ATOM 21 C6 C B1380 -56.973 125.358 61.713 1.00 41.21 C
ATOM 22 P C B1381 -56.149 121.022 65.522 1.00 30.88 P
ATOM 23 OP1 C B1381 -55.090 120.479 66.413 1.00 30.88 O
ATOM 24 OP2 C B1381 -55.993 120.873 64.033 1.00 30.88 O
ATOM 25 O5' C B1381 -57.578 120.477 65.986 1.00 30.88 O
TER
Atoms:
C4: (-60.841,124.878,53.658)
N3: (-60.373,124.172,54.730)
OP1: (-53.386,127.450,51.347)
OP2: (-55.520,126.671,50.180)
C2: (-59.098,124.138,55.202)
C1': (-56.841,124.884,55.006)
C3': (-54.537,124.978,54.539)
O5': (-55.464,126.959,52.672)
O4': (-56.446,126.216,55.238)
C5': (-54.887,127.404,53.886)
P: (-54.870,127.423,51.284)
C4': (-55.034,126.364,54.944)
C2': (-55.810,124.304,54.046)
O2': (-55.784,122.894,54.088)
N1: (-58.213,124.902,54.491)
O4: (-62.033,124.772,53.396)
O2: (-58.773,123.469,56.175)
C6: (-58.605,125.652,53.415)
C5: (-59.865,125.665,52.972)
O3': (-54.030,124.295,55.687)
N3: (-60.373,124.172,54.730)
OP1: (-53.386,127.450,51.347)
OP2: (-55.520,126.671,50.180)
C2: (-59.098,124.138,55.202)
C1': (-56.841,124.884,55.006)
C3': (-54.537,124.978,54.539)
O5': (-55.464,126.959,52.672)
O4': (-56.446,126.216,55.238)
C5': (-54.887,127.404,53.886)
P: (-54.870,127.423,51.284)
C4': (-55.034,126.364,54.944)
C2': (-55.810,124.304,54.046)
O2': (-55.784,122.894,54.088)
N1: (-58.213,124.902,54.491)
O4: (-62.033,124.772,53.396)
O2: (-58.773,123.469,56.175)
C6: (-58.605,125.652,53.415)
C5: (-59.865,125.665,52.972)
O3': (-54.030,124.295,55.687)
C2: (-59.252,125.655,62.486)
OP1: (-52.537,122.276,62.638)
OP2: (-54.080,122.503,60.616)
C4: (-58.797,125.488,60.220)
O5': (-54.443,123.918,62.670)
C3': (-56.438,123.504,64.768)
C1': (-57.431,125.552,64.130)
O4': (-56.037,125.738,64.143)
C5': (-54.137,124.283,64.004)
P: (-53.391,123.128,61.774)
O2: (-60.041,125.797,63.443)
C4': (-55.386,124.606,64.762)
C2': (-57.749,124.255,64.864)
O2': (-58.069,124.548,66.212)
N1: (-57.877,125.512,62.733)
N3: (-59.682,125.639,61.205)
N4: (-59.291,125.483,58.986)
C6: (-56.973,125.358,61.713)
C5: (-57.392,125.334,60.444)
O3': (-56.252,122.589,65.823)
OP1: (-52.537,122.276,62.638)
OP2: (-54.080,122.503,60.616)
C4: (-58.797,125.488,60.220)
O5': (-54.443,123.918,62.670)
C3': (-56.438,123.504,64.768)
C1': (-57.431,125.552,64.130)
O4': (-56.037,125.738,64.143)
C5': (-54.137,124.283,64.004)
P: (-53.391,123.128,61.774)
O2: (-60.041,125.797,63.443)
C4': (-55.386,124.606,64.762)
C2': (-57.749,124.255,64.864)
O2': (-58.069,124.548,66.212)
N1: (-57.877,125.512,62.733)
N3: (-59.682,125.639,61.205)
N4: (-59.291,125.483,58.986)
C6: (-56.973,125.358,61.713)
C5: (-57.392,125.334,60.444)
O3': (-56.252,122.589,65.823)
Image (generated by PyMOL):