ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2423:2426

Extra

PDB:
ATOM 1 O3' G A 422 -40.686 59.475 51.303 1.00 80.32 O
ATOM 2 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 3 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 4 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 5 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
ATOM 6 C5' C A 423 -43.363 57.233 50.718 1.00 64.48 C
ATOM 7 C4' C A 423 -44.780 57.293 50.204 1.00 65.19 C
ATOM 8 O4' C A 423 -44.859 58.135 49.016 1.00 65.99 O
ATOM 9 C3' C A 423 -45.361 55.960 49.770 1.00 65.20 C
ATOM 10 O3' C A 423 -45.894 55.254 50.853 1.00 64.73 O
ATOM 11 C2' C A 423 -46.396 56.346 48.718 1.00 66.15 C
ATOM 12 O2' C A 423 -47.610 56.775 49.317 1.00 66.44 O
ATOM 13 C1' C A 423 -45.721 57.546 48.057 1.00 66.56 C
ATOM 14 N1 C A 423 -44.913 57.129 46.874 1.00 66.71 N
ATOM 15 C2 C A 423 -45.614 56.763 45.714 1.00 67.42 C
ATOM 16 O2 C A 423 -46.882 56.816 45.699 1.00 67.91 O
ATOM 17 N3 C A 423 -44.904 56.361 44.630 1.00 67.61 N
ATOM 18 C4 C A 423 -43.583 56.300 44.656 1.00 67.13 C
ATOM 19 N4 C A 423 -42.979 55.890 43.533 1.00 67.40 N
ATOM 20 C5 C A 423 -42.850 56.659 45.830 1.00 66.40 C
ATOM 21 C6 C A 423 -43.541 57.061 46.899 1.00 66.22 C
ATOM 22 P A A 424 -45.797 53.667 50.921 1.00 60.99 P
ATOM 23 OP1 A A 424 -44.608 53.337 51.754 1.00 60.15 O
ATOM 24 OP2 A A 424 -45.870 53.142 49.534 1.00 61.49 O
ATOM 25 O5' A A 424 -47.127 53.327 51.699 1.00 61.04 O
TER

ATOM 1 O3' G B 425 -53.501 58.839 50.106 1.00 68.56 O
ATOM 2 P C B 426 -53.733 57.500 49.265 1.00 73.16 P
ATOM 3 OP1 C B 426 -54.887 56.787 49.874 1.00 73.20 O
ATOM 4 OP2 C B 426 -52.426 56.800 49.189 1.00 72.41 O
ATOM 5 O5' C B 426 -54.124 58.058 47.836 1.00 74.19 O
ATOM 6 C5' C B 426 -55.000 59.161 47.707 1.00 75.01 C
ATOM 7 C4' C B 426 -55.108 59.596 46.275 1.00 75.92 C
ATOM 8 O4' C B 426 -53.994 60.462 45.952 1.00 75.84 O
ATOM 9 C3' C B 426 -55.009 58.484 45.253 1.00 76.04 C
ATOM 10 O3' C B 426 -56.223 57.766 45.088 1.00 76.49 O
ATOM 11 C2' C B 426 -54.532 59.214 44.005 1.00 76.70 C
ATOM 12 O2' C B 426 -55.616 59.887 43.378 1.00 77.79 O
ATOM 13 C1' C B 426 -53.600 60.268 44.615 1.00 76.29 C
ATOM 14 N1 C B 426 -52.197 59.857 44.615 1.00 75.52 N
ATOM 15 C2 C B 426 -51.372 60.060 43.513 1.00 75.81 C
ATOM 16 O2 C B 426 -51.845 60.572 42.530 1.00 76.72 O
ATOM 17 N3 C B 426 -50.076 59.687 43.531 1.00 75.12 N
ATOM 18 C4 C B 426 -49.590 59.132 44.651 1.00 74.15 C
ATOM 19 N4 C B 426 -48.318 58.756 44.685 1.00 73.50 N
ATOM 20 C5 C B 426 -50.407 58.928 45.805 1.00 73.83 C
ATOM 21 C6 C B 426 -51.694 59.310 45.751 1.00 74.53 C
ATOM 22 P A B 427 -56.171 56.194 44.733 1.00 77.98 P
ATOM 23 OP1 A B 427 -57.528 55.792 44.249 1.00 78.81 O
ATOM 24 OP2 A B 427 -55.576 55.482 45.902 1.00 76.88 O
ATOM 25 O5' A B 427 -55.144 56.179 43.542 1.00 78.12 O
TER

Atoms:
C2: (-45.614,56.763,45.714)
OP1: (-41.713,58.761,49.146)
OP2: (-42.533,60.741,50.400)
C4: (-43.583,56.300,44.656)
O5': (-42.953,58.469,51.254)
C3': (-45.361,55.960,49.770)
C1': (-45.721,57.546,48.057)
O4': (-44.859,58.135,49.016)
C5': (-43.363,57.233,50.718)
P: (-42.019,59.404,50.423)
O2: (-46.882,56.816,45.699)
C4': (-44.780,57.293,50.204)
C2': (-46.396,56.346,48.718)
O2': (-47.610,56.775,49.317)
N1: (-44.913,57.129,46.874)
N3: (-44.904,56.361,44.630)
N4: (-42.979,55.890,43.533)
C6: (-43.541,57.061,46.899)
C5: (-42.850,56.659,45.830)
O3': (-45.894,55.254,50.853)
C2: (-51.372,60.060,43.513)
OP1: (-54.887,56.787,49.874)
OP2: (-52.426,56.800,49.189)
C4: (-49.590,59.132,44.651)
O5': (-54.124,58.058,47.836)
C3': (-55.009,58.484,45.253)
C1': (-53.600,60.268,44.615)
O4': (-53.994,60.462,45.952)
C5': (-55.000,59.161,47.707)
P: (-53.733,57.500,49.265)
O2: (-51.845,60.572,42.530)
C4': (-55.108,59.596,46.275)
C2': (-54.532,59.214,44.005)
O2': (-55.616,59.887,43.378)
N1: (-52.197,59.857,44.615)
N3: (-50.076,59.687,43.531)
N4: (-48.318,58.756,44.685)
C6: (-51.694,59.310,45.751)
C5: (-50.407,58.928,45.805)
O3': (-56.223,57.766,45.088)
Image (generated by PyMOL):
PyMOL image
show in jmol