Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1956:A1959
Extra
PDB:
ATOM 1 O3' G A1955 111.000 117.513 96.536 1.00 53.20 O
ATOM 2 P A A1956 111.191 116.341 95.444 1.00 54.63 P
ATOM 3 OP1 A A1956 110.770 116.846 94.113 1.00 54.05 O
ATOM 4 OP2 A A1956 110.532 115.139 96.010 1.00 55.64 O
ATOM 5 O5' A A1956 112.764 116.079 95.379 1.00 52.17 O
ATOM 6 C5' A A1956 113.557 116.659 94.330 1.00 51.11 C
ATOM 7 C4' A A1956 113.682 118.139 94.569 1.00 48.68 C
ATOM 8 O4' A A1956 114.113 118.355 95.934 1.00 47.89 O
ATOM 9 C3' A A1956 114.661 118.901 93.693 1.00 47.66 C
ATOM 10 O3' A A1956 114.050 119.402 92.498 1.00 46.44 O
ATOM 11 C2' A A1956 115.054 120.072 94.581 1.00 47.32 C
ATOM 12 O2' A A1956 114.130 121.131 94.484 1.00 45.93 O
ATOM 13 C1' A A1956 114.981 119.464 95.982 1.00 48.58 C
ATOM 14 N9 A A1956 116.270 119.028 96.517 1.00 50.41 N
ATOM 15 C8 A A1956 116.718 117.755 96.791 1.00 51.33 C
ATOM 16 N7 A A1956 117.921 117.718 97.311 1.00 52.52 N
ATOM 17 C5 A A1956 118.297 119.053 97.373 1.00 52.57 C
ATOM 18 C6 A A1956 119.464 119.687 97.837 1.00 52.18 C
ATOM 19 N6 A A1956 120.491 119.039 98.375 1.00 52.77 N
ATOM 20 N1 A A1956 119.531 121.029 97.739 1.00 51.90 N
ATOM 21 C2 A A1956 118.485 121.686 97.228 1.00 52.13 C
ATOM 22 N3 A A1956 117.327 121.210 96.776 1.00 52.94 N
ATOM 23 C4 A A1956 117.295 119.868 96.875 1.00 52.31 C
ATOM 24 P A A1957 114.574 118.914 91.054 1.00 47.18 P
ATOM 25 OP1 A A1957 113.688 117.794 90.718 1.00 47.99 O
ATOM 26 OP2 A A1957 116.047 118.694 91.042 1.00 49.99 O
ATOM 27 O5' A A1957 114.211 120.117 90.072 1.00 47.06 O
TER
ATOM 1 O3' U B1958 107.447 121.348 89.532 1.00 44.95 O
ATOM 2 P G B1959 106.611 122.387 90.440 1.00 43.12 P
ATOM 3 OP1 G B1959 105.671 121.598 91.243 1.00 46.63 O
ATOM 4 OP2 G B1959 106.107 123.460 89.577 1.00 43.43 O
ATOM 5 O5' G B1959 107.638 123.003 91.487 1.00 45.73 O
ATOM 6 C5' G B1959 108.972 123.376 91.096 1.00 47.86 C
ATOM 7 C4' G B1959 110.003 122.661 91.960 1.00 48.74 C
ATOM 8 O4' G B1959 111.263 122.599 91.256 1.00 48.62 O
ATOM 9 C3' G B1959 110.369 123.244 93.316 1.00 48.16 C
ATOM 10 O3' G B1959 109.473 122.900 94.349 1.00 46.75 O
ATOM 11 C2' G B1959 111.729 122.620 93.580 1.00 49.96 C
ATOM 12 O2' G B1959 111.644 121.292 94.060 1.00 52.02 O
ATOM 13 C1' G B1959 112.332 122.614 92.185 1.00 50.98 C
ATOM 14 N9 G B1959 113.120 123.819 91.964 1.00 53.62 N
ATOM 15 C8 G B1959 112.829 124.846 91.107 1.00 54.44 C
ATOM 16 N7 G B1959 113.766 125.745 91.047 1.00 55.26 N
ATOM 17 C5 G B1959 114.722 125.302 91.947 1.00 55.97 C
ATOM 18 C6 G B1959 115.968 125.852 92.292 1.00 56.94 C
ATOM 19 O6 G B1959 116.496 126.880 91.865 1.00 57.82 O
ATOM 20 N1 G B1959 116.632 125.070 93.228 1.00 57.61 N
ATOM 21 C2 G B1959 116.162 123.898 93.755 1.00 57.58 C
ATOM 22 N2 G B1959 116.995 123.239 94.587 1.00 57.78 N
ATOM 23 N3 G B1959 114.976 123.389 93.464 1.00 57.66 N
ATOM 24 C4 G B1959 114.323 124.130 92.545 1.00 55.27 C
ATOM 25 P G B1960 109.456 123.775 95.695 1.00 45.73 P
ATOM 26 OP1 G B1960 108.280 123.323 96.451 1.00 45.09 O
ATOM 27 OP2 G B1960 109.635 125.223 95.388 1.00 43.61 O
ATOM 28 O5' G B1960 110.724 123.276 96.503 1.00 46.26 O
TER
ATOM 2 P A A1956 111.191 116.341 95.444 1.00 54.63 P
ATOM 3 OP1 A A1956 110.770 116.846 94.113 1.00 54.05 O
ATOM 4 OP2 A A1956 110.532 115.139 96.010 1.00 55.64 O
ATOM 5 O5' A A1956 112.764 116.079 95.379 1.00 52.17 O
ATOM 6 C5' A A1956 113.557 116.659 94.330 1.00 51.11 C
ATOM 7 C4' A A1956 113.682 118.139 94.569 1.00 48.68 C
ATOM 8 O4' A A1956 114.113 118.355 95.934 1.00 47.89 O
ATOM 9 C3' A A1956 114.661 118.901 93.693 1.00 47.66 C
ATOM 10 O3' A A1956 114.050 119.402 92.498 1.00 46.44 O
ATOM 11 C2' A A1956 115.054 120.072 94.581 1.00 47.32 C
ATOM 12 O2' A A1956 114.130 121.131 94.484 1.00 45.93 O
ATOM 13 C1' A A1956 114.981 119.464 95.982 1.00 48.58 C
ATOM 14 N9 A A1956 116.270 119.028 96.517 1.00 50.41 N
ATOM 15 C8 A A1956 116.718 117.755 96.791 1.00 51.33 C
ATOM 16 N7 A A1956 117.921 117.718 97.311 1.00 52.52 N
ATOM 17 C5 A A1956 118.297 119.053 97.373 1.00 52.57 C
ATOM 18 C6 A A1956 119.464 119.687 97.837 1.00 52.18 C
ATOM 19 N6 A A1956 120.491 119.039 98.375 1.00 52.77 N
ATOM 20 N1 A A1956 119.531 121.029 97.739 1.00 51.90 N
ATOM 21 C2 A A1956 118.485 121.686 97.228 1.00 52.13 C
ATOM 22 N3 A A1956 117.327 121.210 96.776 1.00 52.94 N
ATOM 23 C4 A A1956 117.295 119.868 96.875 1.00 52.31 C
ATOM 24 P A A1957 114.574 118.914 91.054 1.00 47.18 P
ATOM 25 OP1 A A1957 113.688 117.794 90.718 1.00 47.99 O
ATOM 26 OP2 A A1957 116.047 118.694 91.042 1.00 49.99 O
ATOM 27 O5' A A1957 114.211 120.117 90.072 1.00 47.06 O
TER
ATOM 1 O3' U B1958 107.447 121.348 89.532 1.00 44.95 O
ATOM 2 P G B1959 106.611 122.387 90.440 1.00 43.12 P
ATOM 3 OP1 G B1959 105.671 121.598 91.243 1.00 46.63 O
ATOM 4 OP2 G B1959 106.107 123.460 89.577 1.00 43.43 O
ATOM 5 O5' G B1959 107.638 123.003 91.487 1.00 45.73 O
ATOM 6 C5' G B1959 108.972 123.376 91.096 1.00 47.86 C
ATOM 7 C4' G B1959 110.003 122.661 91.960 1.00 48.74 C
ATOM 8 O4' G B1959 111.263 122.599 91.256 1.00 48.62 O
ATOM 9 C3' G B1959 110.369 123.244 93.316 1.00 48.16 C
ATOM 10 O3' G B1959 109.473 122.900 94.349 1.00 46.75 O
ATOM 11 C2' G B1959 111.729 122.620 93.580 1.00 49.96 C
ATOM 12 O2' G B1959 111.644 121.292 94.060 1.00 52.02 O
ATOM 13 C1' G B1959 112.332 122.614 92.185 1.00 50.98 C
ATOM 14 N9 G B1959 113.120 123.819 91.964 1.00 53.62 N
ATOM 15 C8 G B1959 112.829 124.846 91.107 1.00 54.44 C
ATOM 16 N7 G B1959 113.766 125.745 91.047 1.00 55.26 N
ATOM 17 C5 G B1959 114.722 125.302 91.947 1.00 55.97 C
ATOM 18 C6 G B1959 115.968 125.852 92.292 1.00 56.94 C
ATOM 19 O6 G B1959 116.496 126.880 91.865 1.00 57.82 O
ATOM 20 N1 G B1959 116.632 125.070 93.228 1.00 57.61 N
ATOM 21 C2 G B1959 116.162 123.898 93.755 1.00 57.58 C
ATOM 22 N2 G B1959 116.995 123.239 94.587 1.00 57.78 N
ATOM 23 N3 G B1959 114.976 123.389 93.464 1.00 57.66 N
ATOM 24 C4 G B1959 114.323 124.130 92.545 1.00 55.27 C
ATOM 25 P G B1960 109.456 123.775 95.695 1.00 45.73 P
ATOM 26 OP1 G B1960 108.280 123.323 96.451 1.00 45.09 O
ATOM 27 OP2 G B1960 109.635 125.223 95.388 1.00 43.61 O
ATOM 28 O5' G B1960 110.724 123.276 96.503 1.00 46.26 O
TER
Atoms:
OP1: (110.770,116.846,94.113)
OP2: (110.532,115.139,96.010)
C3': (114.661,118.901,93.693)
C1': (114.981,119.464,95.982)
C5': (113.557,116.659,94.330)
O4': (114.113,118.355,95.934)
C8: (116.718,117.755,96.791)
O2': (114.130,121.131,94.484)
C6: (119.464,119.687,97.837)
C5: (118.297,119.053,97.373)
C4: (117.295,119.868,96.875)
P: (111.191,116.341,95.444)
C4': (113.682,118.139,94.569)
C2': (115.054,120.072,94.581)
C2: (118.485,121.686,97.228)
N1: (119.531,121.029,97.739)
N3: (117.327,121.210,96.776)
N6: (120.491,119.039,98.375)
N7: (117.921,117.718,97.311)
N9: (116.270,119.028,96.517)
O5': (112.764,116.079,95.379)
O3': (114.050,119.402,92.498)
OP2: (110.532,115.139,96.010)
C3': (114.661,118.901,93.693)
C1': (114.981,119.464,95.982)
C5': (113.557,116.659,94.330)
O4': (114.113,118.355,95.934)
C8: (116.718,117.755,96.791)
O2': (114.130,121.131,94.484)
C6: (119.464,119.687,97.837)
C5: (118.297,119.053,97.373)
C4: (117.295,119.868,96.875)
P: (111.191,116.341,95.444)
C4': (113.682,118.139,94.569)
C2': (115.054,120.072,94.581)
C2: (118.485,121.686,97.228)
N1: (119.531,121.029,97.739)
N3: (117.327,121.210,96.776)
N6: (120.491,119.039,98.375)
N7: (117.921,117.718,97.311)
N9: (116.270,119.028,96.517)
O5': (112.764,116.079,95.379)
O3': (114.050,119.402,92.498)
OP1: (105.671,121.598,91.243)
OP2: (106.107,123.460,89.577)
C3': (110.369,123.244,93.316)
C1': (112.332,122.614,92.185)
C5': (108.972,123.376,91.096)
O6: (116.496,126.880,91.865)
O4': (111.263,122.599,91.256)
C8: (112.829,124.846,91.107)
C2: (116.162,123.898,93.755)
C6: (115.968,125.852,92.292)
C5: (114.722,125.302,91.947)
C4: (114.323,124.130,92.545)
P: (106.611,122.387,90.440)
C4': (110.003,122.661,91.960)
C2': (111.729,122.620,93.580)
O2': (111.644,121.292,94.060)
N1: (116.632,125.070,93.228)
N2: (116.995,123.239,94.587)
N3: (114.976,123.389,93.464)
N7: (113.766,125.745,91.047)
N9: (113.120,123.819,91.964)
O5': (107.638,123.003,91.487)
O3': (109.473,122.900,94.349)
OP2: (106.107,123.460,89.577)
C3': (110.369,123.244,93.316)
C1': (112.332,122.614,92.185)
C5': (108.972,123.376,91.096)
O6: (116.496,126.880,91.865)
O4': (111.263,122.599,91.256)
C8: (112.829,124.846,91.107)
C2: (116.162,123.898,93.755)
C6: (115.968,125.852,92.292)
C5: (114.722,125.302,91.947)
C4: (114.323,124.130,92.545)
P: (106.611,122.387,90.440)
C4': (110.003,122.661,91.960)
C2': (111.729,122.620,93.580)
O2': (111.644,121.292,94.060)
N1: (116.632,125.070,93.228)
N2: (116.995,123.239,94.587)
N3: (114.976,123.389,93.464)
N7: (113.766,125.745,91.047)
N9: (113.120,123.819,91.964)
O5': (107.638,123.003,91.487)
O3': (109.473,122.900,94.349)
Image (generated by PyMOL):