ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01956:01959

Extra

PDB:
ATOM 1 O3' G A1955 110.753 116.329 95.796 1.00 48.08 O
ATOM 2 P A A1956 110.974 115.125 94.751 1.00 49.54 P
ATOM 3 OP1 A A1956 110.429 115.573 93.436 1.00 46.69 O
ATOM 4 OP2 A A1956 110.474 113.863 95.359 1.00 46.27 O
ATOM 5 O5' A A1956 112.561 115.013 94.631 1.00 46.89 O
ATOM 6 C5' A A1956 113.268 115.634 93.538 1.00 47.65 C
ATOM 7 C4' A A1956 113.451 117.114 93.805 1.00 48.76 C
ATOM 8 O4' A A1956 113.961 117.303 95.151 1.00 48.96 O
ATOM 9 C3' A A1956 114.443 117.825 92.898 1.00 48.37 C
ATOM 10 O3' A A1956 113.824 118.252 91.679 1.00 49.09 O
ATOM 11 C2' A A1956 114.900 119.002 93.763 1.00 48.86 C
ATOM 12 O2' A A1956 114.030 120.120 93.730 1.00 48.44 O
ATOM 13 C1' A A1956 114.858 118.394 95.171 1.00 48.48 C
ATOM 14 N9 A A1956 116.140 117.929 95.698 1.00 49.02 N
ATOM 15 C8 A A1956 116.521 116.642 95.971 1.00 49.08 C
ATOM 16 N7 A A1956 117.730 116.542 96.462 1.00 51.18 N
ATOM 17 C5 A A1956 118.181 117.853 96.509 1.00 50.79 C
ATOM 18 C6 A A1956 119.393 118.420 96.931 1.00 51.91 C
ATOM 19 N6 A A1956 120.421 117.708 97.398 1.00 54.28 N
ATOM 20 N1 A A1956 119.520 119.761 96.854 1.00 51.66 N
ATOM 21 C2 A A1956 118.496 120.473 96.373 1.00 52.00 C
ATOM 22 N3 A A1956 117.312 120.056 95.939 1.00 51.50 N
ATOM 23 C4 A A1956 117.214 118.717 96.038 1.00 50.82 C
ATOM 24 P A A1957 114.386 117.731 90.268 1.00 52.80 P
ATOM 25 OP1 A A1957 113.616 116.508 89.941 1.00 54.37 O
ATOM 26 OP2 A A1957 115.862 117.657 90.349 1.00 56.00 O
ATOM 27 O5' A A1957 113.983 118.864 89.204 1.00 51.37 O
TER

ATOM 1 O3' U B1958 107.050 120.246 88.866 1.00 50.96 O
ATOM 2 P G B1959 106.355 121.315 89.876 1.00 48.99 P
ATOM 3 OP1 G B1959 105.387 120.644 90.767 1.00 56.23 O
ATOM 4 OP2 G B1959 105.914 122.473 89.076 1.00 50.39 O
ATOM 5 O5' G B1959 107.499 121.828 90.847 1.00 52.41 O
ATOM 6 C5' G B1959 108.789 122.184 90.367 1.00 47.24 C
ATOM 7 C4' G B1959 109.828 121.550 91.247 1.00 46.24 C
ATOM 8 O4' G B1959 111.091 121.519 90.554 1.00 43.52 O
ATOM 9 C3' G B1959 110.141 122.204 92.584 1.00 46.12 C
ATOM 10 O3' G B1959 109.188 121.890 93.604 1.00 48.49 O
ATOM 11 C2' G B1959 111.501 121.595 92.883 1.00 46.26 C
ATOM 12 O2' G B1959 111.411 120.250 93.295 1.00 44.49 O
ATOM 13 C1' G B1959 112.138 121.599 91.495 1.00 44.81 C
ATOM 14 N9 G B1959 112.902 122.811 91.228 1.00 43.04 N
ATOM 15 C8 G B1959 112.564 123.859 90.406 1.00 42.73 C
ATOM 16 N7 G B1959 113.483 124.781 90.352 1.00 42.33 N
ATOM 17 C5 G B1959 114.481 124.313 91.195 1.00 43.29 C
ATOM 18 C6 G B1959 115.726 124.875 91.531 1.00 43.69 C
ATOM 19 O6 G B1959 116.223 125.928 91.126 1.00 47.58 O
ATOM 20 N1 G B1959 116.421 124.075 92.432 1.00 42.44 N
ATOM 21 C2 G B1959 115.970 122.881 92.940 1.00 41.51 C
ATOM 22 N2 G B1959 116.782 122.239 93.798 1.00 41.13 N
ATOM 23 N3 G B1959 114.810 122.349 92.629 1.00 41.07 N
ATOM 24 C4 G B1959 114.125 123.110 91.754 1.00 42.44 C
ATOM 25 P G B1960 109.196 122.707 95.002 1.00 48.07 P
ATOM 26 OP1 G B1960 108.040 122.219 95.794 1.00 50.47 O
ATOM 27 OP2 G B1960 109.324 124.161 94.726 1.00 46.99 O
ATOM 28 O5' G B1960 110.522 122.221 95.748 1.00 48.04 O
TER

Atoms:
OP1: (110.429,115.573,93.436)
OP2: (110.474,113.863,95.359)
C3': (114.443,117.825,92.898)
C1': (114.858,118.394,95.171)
C5': (113.268,115.634,93.538)
O4': (113.961,117.303,95.151)
C8: (116.521,116.642,95.971)
O2': (114.030,120.120,93.730)
C6: (119.393,118.420,96.931)
C5: (118.181,117.853,96.509)
C4: (117.214,118.717,96.038)
P: (110.974,115.125,94.751)
C4': (113.451,117.114,93.805)
C2': (114.900,119.002,93.763)
C2: (118.496,120.473,96.373)
N1: (119.520,119.761,96.854)
N3: (117.312,120.056,95.939)
N6: (120.421,117.708,97.398)
N7: (117.730,116.542,96.462)
N9: (116.140,117.929,95.698)
O5': (112.561,115.013,94.631)
O3': (113.824,118.252,91.679)
OP1: (105.387,120.644,90.767)
OP2: (105.914,122.473,89.076)
C3': (110.141,122.204,92.584)
C1': (112.138,121.599,91.495)
C5': (108.789,122.184,90.367)
O6: (116.223,125.928,91.126)
O4': (111.091,121.519,90.554)
C8: (112.564,123.859,90.406)
C2: (115.970,122.881,92.940)
C6: (115.726,124.875,91.531)
C5: (114.481,124.313,91.195)
C4: (114.125,123.110,91.754)
P: (106.355,121.315,89.876)
C4': (109.828,121.550,91.247)
C2': (111.501,121.595,92.883)
O2': (111.411,120.250,93.295)
N1: (116.421,124.075,92.432)
N2: (116.782,122.239,93.798)
N3: (114.810,122.349,92.629)
N7: (113.483,124.781,90.352)
N9: (112.902,122.811,91.228)
O5': (107.499,121.828,90.847)
O3': (109.188,121.890,93.604)
Image (generated by PyMOL):
PyMOL image
show in jmol