ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A1278:A1123

Extra

PDB:
ATOM 1 O3' G A1277 -107.964 106.101 32.188 1.00 64.15 O
ATOM 2 P A A1278 -106.665 105.768 31.294 1.00 64.79 P
ATOM 3 OP1 A A1278 -107.120 105.591 29.891 1.00 64.79 O
ATOM 4 OP2 A A1278 -105.951 104.649 31.952 1.00 64.79 O
ATOM 5 O5' A A1278 -105.809 107.106 31.420 1.00 64.79 O
ATOM 6 C5' A A1278 -105.851 108.112 30.408 1.00 64.79 C
ATOM 7 C4' A A1278 -105.454 109.461 30.957 1.00 64.79 C
ATOM 8 O4' A A1278 -104.217 109.886 30.332 1.00 64.79 O
ATOM 9 C3' A A1278 -106.470 110.576 30.741 1.00 64.79 C
ATOM 10 O3' A A1278 -106.721 111.251 31.963 1.00 64.79 O
ATOM 11 C2' A A1278 -105.806 111.531 29.750 1.00 64.79 C
ATOM 12 O2' A A1278 -106.075 112.897 30.002 1.00 64.79 O
ATOM 13 C1' A A1278 -104.319 111.224 29.898 1.00 64.79 C
ATOM 14 N9 A A1278 -103.573 111.352 28.642 1.00 65.41 N
ATOM 15 C8 A A1278 -103.758 110.598 27.516 1.00 65.41 C
ATOM 16 N7 A A1278 -102.962 110.907 26.524 1.00 65.41 N
ATOM 17 C5 A A1278 -102.195 111.951 27.018 1.00 65.41 C
ATOM 18 C6 A A1278 -101.160 112.731 26.446 1.00 65.41 C
ATOM 19 N6 A A1278 -100.712 112.562 25.198 1.00 65.41 N
ATOM 20 N1 A A1278 -100.595 113.704 27.205 1.00 65.41 N
ATOM 21 C2 A A1278 -101.053 113.871 28.456 1.00 65.41 C
ATOM 22 N3 A A1278 -102.020 113.206 29.099 1.00 65.41 N
ATOM 23 C4 A A1278 -102.565 112.241 28.324 1.00 65.41 C
ATOM 24 P C A1279 -107.979 110.809 32.849 1.00 60.25 P
ATOM 25 OP1 C A1279 -108.051 111.731 34.020 1.00 60.25 O
ATOM 26 OP2 C A1279 -107.830 109.349 33.086 1.00 60.25 O
ATOM 27 O5' C A1279 -109.218 111.079 31.876 1.00 60.25 O
TER

ATOM 1 O3' G B1122 -105.121 109.671 17.633 1.00 66.18 O
ATOM 2 P U B1123 -106.706 109.424 17.518 1.00 65.34 P
ATOM 3 OP1 U B1123 -106.928 108.596 16.295 1.00 65.34 O
ATOM 4 OP2 U B1123 -107.371 110.758 17.617 1.00 65.34 O
ATOM 5 O5' U B1123 -107.028 108.567 18.823 1.00 65.34 O
ATOM 6 C5' U B1123 -108.353 108.109 19.085 1.00 65.34 C
ATOM 7 C4' U B1123 -108.670 108.104 20.562 1.00 65.34 C
ATOM 8 O4' U B1123 -107.430 108.148 21.324 1.00 65.34 O
ATOM 9 C3' U B1123 -109.509 109.282 21.052 1.00 65.34 C
ATOM 10 O3' U B1123 -110.371 108.839 22.100 1.00 65.34 O
ATOM 11 C2' U B1123 -108.453 110.229 21.615 1.00 65.34 C
ATOM 12 O2' U B1123 -108.926 111.145 22.577 1.00 65.34 O
ATOM 13 C1' U B1123 -107.469 109.242 22.220 1.00 65.34 C
ATOM 14 N1 U B1123 -106.092 109.775 22.388 1.00 65.34 N
ATOM 15 C2 U B1123 -105.738 110.312 23.625 1.00 65.34 C
ATOM 16 O2 U B1123 -106.506 110.366 24.570 1.00 65.34 O
ATOM 17 N3 U B1123 -104.450 110.789 23.724 1.00 65.34 N
ATOM 18 C4 U B1123 -103.492 110.781 22.731 1.00 65.34 C
ATOM 19 O4 U B1123 -102.370 111.243 22.955 1.00 65.34 O
ATOM 20 C5 U B1123 -103.924 110.212 21.487 1.00 65.34 C
ATOM 21 C6 U B1123 -105.174 109.740 21.363 1.00 65.34 C
ATOM 22 P U B1124 -111.604 109.752 22.578 1.00 76.27 P
ATOM 23 OP1 U B1124 -112.732 108.836 22.869 1.00 76.27 O
ATOM 24 OP2 U B1124 -111.787 110.808 21.547 1.00 76.27 O
ATOM 25 O5' U B1124 -111.060 110.401 23.937 1.00 76.27 O
TER

Atoms:
OP1: (-107.120,105.591,29.891)
OP2: (-105.951,104.649,31.952)
C3': (-106.470,110.576,30.741)
C1': (-104.319,111.224,29.898)
C5': (-105.851,108.112,30.408)
O4': (-104.217,109.886,30.332)
C8: (-103.758,110.598,27.516)
O2': (-106.075,112.897,30.002)
C6: (-101.160,112.731,26.446)
C5: (-102.195,111.951,27.018)
C4: (-102.565,112.241,28.324)
P: (-106.665,105.768,31.294)
C4': (-105.454,109.461,30.957)
C2': (-105.806,111.531,29.750)
C2: (-101.053,113.871,28.456)
N1: (-100.595,113.704,27.205)
N3: (-102.020,113.206,29.099)
N6: (-100.712,112.562,25.198)
N7: (-102.962,110.907,26.524)
N9: (-103.573,111.352,28.642)
O5': (-105.809,107.106,31.420)
O3': (-106.721,111.251,31.963)
C4: (-103.492,110.781,22.731)
N3: (-104.450,110.789,23.724)
OP1: (-106.928,108.596,16.295)
OP2: (-107.371,110.758,17.617)
C2: (-105.738,110.312,23.625)
C1': (-107.469,109.242,22.220)
C3': (-109.509,109.282,21.052)
O5': (-107.028,108.567,18.823)
O4': (-107.430,108.148,21.324)
C5': (-108.353,108.109,19.085)
P: (-106.706,109.424,17.518)
C4': (-108.670,108.104,20.562)
C2': (-108.453,110.229,21.615)
O2': (-108.926,111.145,22.577)
N1: (-106.092,109.775,22.388)
O4: (-102.370,111.243,22.955)
O2: (-106.506,110.366,24.570)
C6: (-105.174,109.740,21.363)
C5: (-103.924,110.212,21.487)
O3': (-110.371,108.839,22.100)
Image (generated by PyMOL):
PyMOL image
show in jmol