Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0653:0197
Extra
PDB:
ATOM 1 O3' U A 652 40.378 97.767 34.402 1.00 40.22 O
ATOM 2 P A A 653 40.897 99.165 33.799 1.00 41.41 P
ATOM 3 OP1 A A 653 40.571 100.205 34.807 1.00 39.47 O
ATOM 4 OP2 A A 653 40.395 99.317 32.403 1.00 37.75 O
ATOM 5 O5' A A 653 42.484 98.977 33.753 1.00 39.49 O
ATOM 6 C5' A A 653 43.260 98.949 34.968 1.00 36.19 C
ATOM 7 C4' A A 653 44.739 99.102 34.670 1.00 37.64 C
ATOM 8 O4' A A 653 45.307 97.871 34.161 1.00 38.23 O
ATOM 9 C3' A A 653 45.115 100.146 33.635 1.00 37.51 C
ATOM 10 O3' A A 653 45.123 101.432 34.213 1.00 35.98 O
ATOM 11 C2' A A 653 46.509 99.698 33.217 1.00 38.74 C
ATOM 12 O2' A A 653 47.514 100.090 34.130 1.00 37.84 O
ATOM 13 C1' A A 653 46.359 98.175 33.258 1.00 39.35 C
ATOM 14 N9 A A 653 46.034 97.579 31.963 1.00 42.07 N
ATOM 15 C8 A A 653 44.804 97.162 31.515 1.00 43.01 C
ATOM 16 N7 A A 653 44.834 96.623 30.320 1.00 45.57 N
ATOM 17 C5 A A 653 46.170 96.697 29.953 1.00 43.94 C
ATOM 18 C6 A A 653 46.856 96.283 28.799 1.00 43.93 C
ATOM 19 N6 A A 653 46.268 95.671 27.773 1.00 42.72 N
ATOM 20 N1 A A 653 48.184 96.517 28.738 1.00 44.83 N
ATOM 21 C2 A A 653 48.774 97.123 29.779 1.00 44.56 C
ATOM 22 N3 A A 653 48.238 97.547 30.923 1.00 42.91 N
ATOM 23 C4 A A 653 46.918 97.300 30.947 1.00 42.88 C
ATOM 24 P A A 654 44.540 102.672 33.392 1.00 38.42 P
ATOM 25 OP1 A A 654 44.424 103.798 34.355 1.00 35.56 O
ATOM 26 OP2 A A 654 43.343 102.232 32.633 1.00 37.48 O
ATOM 27 O5' A A 654 45.704 103.000 32.354 1.00 38.42 O
TER
ATOM 1 O3' C B 196 52.891 105.035 33.897 1.00 35.11 O
ATOM 2 P G B 197 53.221 103.931 35.021 1.00 36.41 P
ATOM 3 OP1 G B 197 52.598 104.436 36.275 1.00 32.81 O
ATOM 4 OP2 G B 197 54.675 103.608 34.998 1.00 32.10 O
ATOM 5 O5' G B 197 52.445 102.621 34.526 1.00 38.19 O
ATOM 6 C5' G B 197 51.001 102.596 34.450 1.00 37.61 C
ATOM 7 C4' G B 197 50.517 101.317 33.796 1.00 38.29 C
ATOM 8 O4' G B 197 50.945 101.277 32.402 1.00 38.12 O
ATOM 9 C3' G B 197 51.028 99.999 34.360 1.00 37.33 C
ATOM 10 O3' G B 197 50.369 99.562 35.545 1.00 35.45 O
ATOM 11 C2' G B 197 50.763 99.051 33.203 1.00 37.44 C
ATOM 12 O2' G B 197 49.397 98.700 33.106 1.00 36.89 O
ATOM 13 C1' G B 197 51.156 99.927 32.012 1.00 36.57 C
ATOM 14 N9 G B 197 52.566 99.750 31.678 1.00 35.13 N
ATOM 15 C8 G B 197 53.611 100.574 32.007 1.00 33.58 C
ATOM 16 N7 G B 197 54.760 100.146 31.563 1.00 33.07 N
ATOM 17 C5 G B 197 54.457 98.968 30.902 1.00 33.60 C
ATOM 18 C6 G B 197 55.299 98.060 30.213 1.00 36.67 C
ATOM 19 O6 G B 197 56.521 98.131 30.024 1.00 37.02 O
ATOM 20 N1 G B 197 54.581 96.981 29.708 1.00 37.31 N
ATOM 21 C2 G B 197 53.227 96.807 29.834 1.00 36.39 C
ATOM 22 N2 G B 197 52.725 95.703 29.283 1.00 38.14 N
ATOM 23 N3 G B 197 52.428 97.653 30.457 1.00 35.06 N
ATOM 24 C4 G B 197 53.108 98.704 30.967 1.00 35.08 C
ATOM 25 P U B 198 51.239 98.926 36.741 1.00 36.27 P
ATOM 26 OP1 U B 198 50.326 98.707 37.873 1.00 34.79 O
ATOM 27 OP2 U B 198 52.440 99.781 36.922 1.00 39.27 O
ATOM 28 O5' U B 198 51.796 97.532 36.192 1.00 34.63 O
TER
ATOM 2 P A A 653 40.897 99.165 33.799 1.00 41.41 P
ATOM 3 OP1 A A 653 40.571 100.205 34.807 1.00 39.47 O
ATOM 4 OP2 A A 653 40.395 99.317 32.403 1.00 37.75 O
ATOM 5 O5' A A 653 42.484 98.977 33.753 1.00 39.49 O
ATOM 6 C5' A A 653 43.260 98.949 34.968 1.00 36.19 C
ATOM 7 C4' A A 653 44.739 99.102 34.670 1.00 37.64 C
ATOM 8 O4' A A 653 45.307 97.871 34.161 1.00 38.23 O
ATOM 9 C3' A A 653 45.115 100.146 33.635 1.00 37.51 C
ATOM 10 O3' A A 653 45.123 101.432 34.213 1.00 35.98 O
ATOM 11 C2' A A 653 46.509 99.698 33.217 1.00 38.74 C
ATOM 12 O2' A A 653 47.514 100.090 34.130 1.00 37.84 O
ATOM 13 C1' A A 653 46.359 98.175 33.258 1.00 39.35 C
ATOM 14 N9 A A 653 46.034 97.579 31.963 1.00 42.07 N
ATOM 15 C8 A A 653 44.804 97.162 31.515 1.00 43.01 C
ATOM 16 N7 A A 653 44.834 96.623 30.320 1.00 45.57 N
ATOM 17 C5 A A 653 46.170 96.697 29.953 1.00 43.94 C
ATOM 18 C6 A A 653 46.856 96.283 28.799 1.00 43.93 C
ATOM 19 N6 A A 653 46.268 95.671 27.773 1.00 42.72 N
ATOM 20 N1 A A 653 48.184 96.517 28.738 1.00 44.83 N
ATOM 21 C2 A A 653 48.774 97.123 29.779 1.00 44.56 C
ATOM 22 N3 A A 653 48.238 97.547 30.923 1.00 42.91 N
ATOM 23 C4 A A 653 46.918 97.300 30.947 1.00 42.88 C
ATOM 24 P A A 654 44.540 102.672 33.392 1.00 38.42 P
ATOM 25 OP1 A A 654 44.424 103.798 34.355 1.00 35.56 O
ATOM 26 OP2 A A 654 43.343 102.232 32.633 1.00 37.48 O
ATOM 27 O5' A A 654 45.704 103.000 32.354 1.00 38.42 O
TER
ATOM 1 O3' C B 196 52.891 105.035 33.897 1.00 35.11 O
ATOM 2 P G B 197 53.221 103.931 35.021 1.00 36.41 P
ATOM 3 OP1 G B 197 52.598 104.436 36.275 1.00 32.81 O
ATOM 4 OP2 G B 197 54.675 103.608 34.998 1.00 32.10 O
ATOM 5 O5' G B 197 52.445 102.621 34.526 1.00 38.19 O
ATOM 6 C5' G B 197 51.001 102.596 34.450 1.00 37.61 C
ATOM 7 C4' G B 197 50.517 101.317 33.796 1.00 38.29 C
ATOM 8 O4' G B 197 50.945 101.277 32.402 1.00 38.12 O
ATOM 9 C3' G B 197 51.028 99.999 34.360 1.00 37.33 C
ATOM 10 O3' G B 197 50.369 99.562 35.545 1.00 35.45 O
ATOM 11 C2' G B 197 50.763 99.051 33.203 1.00 37.44 C
ATOM 12 O2' G B 197 49.397 98.700 33.106 1.00 36.89 O
ATOM 13 C1' G B 197 51.156 99.927 32.012 1.00 36.57 C
ATOM 14 N9 G B 197 52.566 99.750 31.678 1.00 35.13 N
ATOM 15 C8 G B 197 53.611 100.574 32.007 1.00 33.58 C
ATOM 16 N7 G B 197 54.760 100.146 31.563 1.00 33.07 N
ATOM 17 C5 G B 197 54.457 98.968 30.902 1.00 33.60 C
ATOM 18 C6 G B 197 55.299 98.060 30.213 1.00 36.67 C
ATOM 19 O6 G B 197 56.521 98.131 30.024 1.00 37.02 O
ATOM 20 N1 G B 197 54.581 96.981 29.708 1.00 37.31 N
ATOM 21 C2 G B 197 53.227 96.807 29.834 1.00 36.39 C
ATOM 22 N2 G B 197 52.725 95.703 29.283 1.00 38.14 N
ATOM 23 N3 G B 197 52.428 97.653 30.457 1.00 35.06 N
ATOM 24 C4 G B 197 53.108 98.704 30.967 1.00 35.08 C
ATOM 25 P U B 198 51.239 98.926 36.741 1.00 36.27 P
ATOM 26 OP1 U B 198 50.326 98.707 37.873 1.00 34.79 O
ATOM 27 OP2 U B 198 52.440 99.781 36.922 1.00 39.27 O
ATOM 28 O5' U B 198 51.796 97.532 36.192 1.00 34.63 O
TER
Atoms:
OP1: (40.571,100.205,34.807)
OP2: (40.395,99.317,32.403)
C3': (45.115,100.146,33.635)
C1': (46.359,98.175,33.258)
C5': (43.260,98.949,34.968)
O4': (45.307,97.871,34.161)
C8: (44.804,97.162,31.515)
O2': (47.514,100.090,34.130)
C6: (46.856,96.283,28.799)
C5: (46.170,96.697,29.953)
C4: (46.918,97.300,30.947)
P: (40.897,99.165,33.799)
C4': (44.739,99.102,34.670)
C2': (46.509,99.698,33.217)
C2: (48.774,97.123,29.779)
N1: (48.184,96.517,28.738)
N3: (48.238,97.547,30.923)
N6: (46.268,95.671,27.773)
N7: (44.834,96.623,30.320)
N9: (46.034,97.579,31.963)
O5': (42.484,98.977,33.753)
O3': (45.123,101.432,34.213)
OP2: (40.395,99.317,32.403)
C3': (45.115,100.146,33.635)
C1': (46.359,98.175,33.258)
C5': (43.260,98.949,34.968)
O4': (45.307,97.871,34.161)
C8: (44.804,97.162,31.515)
O2': (47.514,100.090,34.130)
C6: (46.856,96.283,28.799)
C5: (46.170,96.697,29.953)
C4: (46.918,97.300,30.947)
P: (40.897,99.165,33.799)
C4': (44.739,99.102,34.670)
C2': (46.509,99.698,33.217)
C2: (48.774,97.123,29.779)
N1: (48.184,96.517,28.738)
N3: (48.238,97.547,30.923)
N6: (46.268,95.671,27.773)
N7: (44.834,96.623,30.320)
N9: (46.034,97.579,31.963)
O5': (42.484,98.977,33.753)
O3': (45.123,101.432,34.213)
OP1: (52.598,104.436,36.275)
OP2: (54.675,103.608,34.998)
C3': (51.028,99.999,34.360)
C1': (51.156,99.927,32.012)
C5': (51.001,102.596,34.450)
O6: (56.521,98.131,30.024)
O4': (50.945,101.277,32.402)
C8: (53.611,100.574,32.007)
C2: (53.227,96.807,29.834)
C6: (55.299,98.060,30.213)
C5: (54.457,98.968,30.902)
C4: (53.108,98.704,30.967)
P: (53.221,103.931,35.021)
C4': (50.517,101.317,33.796)
C2': (50.763,99.051,33.203)
O2': (49.397,98.700,33.106)
N1: (54.581,96.981,29.708)
N2: (52.725,95.703,29.283)
N3: (52.428,97.653,30.457)
N7: (54.760,100.146,31.563)
N9: (52.566,99.750,31.678)
O5': (52.445,102.621,34.526)
O3': (50.369,99.562,35.545)
OP2: (54.675,103.608,34.998)
C3': (51.028,99.999,34.360)
C1': (51.156,99.927,32.012)
C5': (51.001,102.596,34.450)
O6: (56.521,98.131,30.024)
O4': (50.945,101.277,32.402)
C8: (53.611,100.574,32.007)
C2: (53.227,96.807,29.834)
C6: (55.299,98.060,30.213)
C5: (54.457,98.968,30.902)
C4: (53.108,98.704,30.967)
P: (53.221,103.931,35.021)
C4': (50.517,101.317,33.796)
C2': (50.763,99.051,33.203)
O2': (49.397,98.700,33.106)
N1: (54.581,96.981,29.708)
N2: (52.725,95.703,29.283)
N3: (52.428,97.653,30.457)
N7: (54.760,100.146,31.563)
N9: (52.566,99.750,31.678)
O5': (52.445,102.621,34.526)
O3': (50.369,99.562,35.545)
Image (generated by PyMOL):