Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2638:A2399
Extra
PDB:
ATOM 1 O3' G A2637 52.671 125.579 155.057 1.00 50.23 O
ATOM 2 P A A2638 52.524 126.795 154.024 1.00 51.76 P
ATOM 3 OP1 A A2638 53.609 127.773 154.273 1.00 51.30 O
ATOM 4 OP2 A A2638 51.114 127.270 153.999 1.00 50.49 O
ATOM 5 O5' A A2638 52.872 126.089 152.646 1.00 51.13 O
ATOM 6 C5' A A2638 52.977 126.859 151.458 1.00 50.34 C
ATOM 7 C4' A A2638 54.165 126.423 150.645 1.00 49.22 C
ATOM 8 O4' A A2638 54.040 125.031 150.272 1.00 49.37 O
ATOM 9 C3' A A2638 54.206 127.176 149.336 1.00 48.45 C
ATOM 10 O3' A A2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 11 C2' A A2638 54.901 126.208 148.406 1.00 47.79 C
ATOM 12 O2' A A2638 56.289 126.231 148.630 1.00 47.14 O
ATOM 13 C1' A A2638 54.332 124.877 148.896 1.00 48.11 C
ATOM 14 N9 A A2638 53.115 124.383 148.240 1.00 48.02 N
ATOM 15 C8 A A2638 51.853 124.309 148.790 1.00 47.38 C
ATOM 16 N7 A A2638 50.972 123.732 148.016 1.00 48.45 N
ATOM 17 C5 A A2638 51.689 123.429 146.863 1.00 48.81 C
ATOM 18 C6 A A2638 51.320 122.810 145.652 1.00 49.11 C
ATOM 19 N6 A A2638 50.093 122.339 145.399 1.00 48.37 N
ATOM 20 N1 A A2638 52.269 122.686 144.698 1.00 49.66 N
ATOM 21 C2 A A2638 53.496 123.150 144.953 1.00 48.93 C
ATOM 22 N3 A A2638 53.965 123.741 146.049 1.00 48.57 N
ATOM 23 C4 A A2638 53.002 123.848 146.979 1.00 48.47 C
ATOM 24 P A A2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 25 OP1 A A2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 26 OP2 A A2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 27 O5' A A2639 54.700 130.627 148.464 1.00 47.03 O
TER
ATOM 1 O3' U B2398 64.521 130.029 148.093 1.00 53.14 O
ATOM 2 P G B2399 64.148 129.074 149.337 1.00 52.60 P
ATOM 3 OP1 G B2399 64.359 129.848 150.584 1.00 54.24 O
ATOM 4 OP2 G B2399 64.835 127.769 149.158 1.00 52.72 O
ATOM 5 O5' G B2399 62.582 128.826 149.204 1.00 50.40 O
ATOM 6 C5' G B2399 61.641 129.898 149.385 1.00 46.56 C
ATOM 7 C4' G B2399 60.237 129.353 149.345 1.00 45.75 C
ATOM 8 O4' G B2399 59.996 128.756 148.047 1.00 44.17 O
ATOM 9 C3' G B2399 60.007 128.208 150.305 1.00 46.01 C
ATOM 10 O3' G B2399 59.748 128.644 151.630 1.00 49.36 O
ATOM 11 C2' G B2399 58.861 127.443 149.664 1.00 44.24 C
ATOM 12 O2' G B2399 57.599 128.026 149.920 1.00 45.61 O
ATOM 13 C1' G B2399 59.220 127.574 148.187 1.00 41.88 C
ATOM 14 N9 G B2399 60.005 126.443 147.695 1.00 39.09 N
ATOM 15 C8 G B2399 61.365 126.384 147.555 1.00 39.00 C
ATOM 16 N7 G B2399 61.788 125.241 147.091 1.00 38.65 N
ATOM 17 C5 G B2399 60.637 124.496 146.917 1.00 38.22 C
ATOM 18 C6 G B2399 60.463 123.178 146.437 1.00 40.30 C
ATOM 19 O6 G B2399 61.327 122.364 146.072 1.00 41.19 O
ATOM 20 N1 G B2399 59.118 122.825 146.401 1.00 39.55 N
ATOM 21 C2 G B2399 58.083 123.632 146.777 1.00 39.08 C
ATOM 22 N2 G B2399 56.857 123.116 146.632 1.00 39.51 N
ATOM 23 N3 G B2399 58.233 124.853 147.246 1.00 38.15 N
ATOM 24 C4 G B2399 59.526 125.222 147.283 1.00 37.96 C
ATOM 25 P C B2400 60.223 127.725 152.855 1.00 51.88 P
ATOM 26 OP1 C B2400 59.821 128.414 154.107 1.00 51.22 O
ATOM 27 OP2 C B2400 61.643 127.345 152.637 1.00 48.90 O
ATOM 28 O5' C B2400 59.275 126.457 152.705 1.00 49.96 O
TER
ATOM 2 P A A2638 52.524 126.795 154.024 1.00 51.76 P
ATOM 3 OP1 A A2638 53.609 127.773 154.273 1.00 51.30 O
ATOM 4 OP2 A A2638 51.114 127.270 153.999 1.00 50.49 O
ATOM 5 O5' A A2638 52.872 126.089 152.646 1.00 51.13 O
ATOM 6 C5' A A2638 52.977 126.859 151.458 1.00 50.34 C
ATOM 7 C4' A A2638 54.165 126.423 150.645 1.00 49.22 C
ATOM 8 O4' A A2638 54.040 125.031 150.272 1.00 49.37 O
ATOM 9 C3' A A2638 54.206 127.176 149.336 1.00 48.45 C
ATOM 10 O3' A A2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 11 C2' A A2638 54.901 126.208 148.406 1.00 47.79 C
ATOM 12 O2' A A2638 56.289 126.231 148.630 1.00 47.14 O
ATOM 13 C1' A A2638 54.332 124.877 148.896 1.00 48.11 C
ATOM 14 N9 A A2638 53.115 124.383 148.240 1.00 48.02 N
ATOM 15 C8 A A2638 51.853 124.309 148.790 1.00 47.38 C
ATOM 16 N7 A A2638 50.972 123.732 148.016 1.00 48.45 N
ATOM 17 C5 A A2638 51.689 123.429 146.863 1.00 48.81 C
ATOM 18 C6 A A2638 51.320 122.810 145.652 1.00 49.11 C
ATOM 19 N6 A A2638 50.093 122.339 145.399 1.00 48.37 N
ATOM 20 N1 A A2638 52.269 122.686 144.698 1.00 49.66 N
ATOM 21 C2 A A2638 53.496 123.150 144.953 1.00 48.93 C
ATOM 22 N3 A A2638 53.965 123.741 146.049 1.00 48.57 N
ATOM 23 C4 A A2638 53.002 123.848 146.979 1.00 48.47 C
ATOM 24 P A A2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 25 OP1 A A2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 26 OP2 A A2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 27 O5' A A2639 54.700 130.627 148.464 1.00 47.03 O
TER
ATOM 1 O3' U B2398 64.521 130.029 148.093 1.00 53.14 O
ATOM 2 P G B2399 64.148 129.074 149.337 1.00 52.60 P
ATOM 3 OP1 G B2399 64.359 129.848 150.584 1.00 54.24 O
ATOM 4 OP2 G B2399 64.835 127.769 149.158 1.00 52.72 O
ATOM 5 O5' G B2399 62.582 128.826 149.204 1.00 50.40 O
ATOM 6 C5' G B2399 61.641 129.898 149.385 1.00 46.56 C
ATOM 7 C4' G B2399 60.237 129.353 149.345 1.00 45.75 C
ATOM 8 O4' G B2399 59.996 128.756 148.047 1.00 44.17 O
ATOM 9 C3' G B2399 60.007 128.208 150.305 1.00 46.01 C
ATOM 10 O3' G B2399 59.748 128.644 151.630 1.00 49.36 O
ATOM 11 C2' G B2399 58.861 127.443 149.664 1.00 44.24 C
ATOM 12 O2' G B2399 57.599 128.026 149.920 1.00 45.61 O
ATOM 13 C1' G B2399 59.220 127.574 148.187 1.00 41.88 C
ATOM 14 N9 G B2399 60.005 126.443 147.695 1.00 39.09 N
ATOM 15 C8 G B2399 61.365 126.384 147.555 1.00 39.00 C
ATOM 16 N7 G B2399 61.788 125.241 147.091 1.00 38.65 N
ATOM 17 C5 G B2399 60.637 124.496 146.917 1.00 38.22 C
ATOM 18 C6 G B2399 60.463 123.178 146.437 1.00 40.30 C
ATOM 19 O6 G B2399 61.327 122.364 146.072 1.00 41.19 O
ATOM 20 N1 G B2399 59.118 122.825 146.401 1.00 39.55 N
ATOM 21 C2 G B2399 58.083 123.632 146.777 1.00 39.08 C
ATOM 22 N2 G B2399 56.857 123.116 146.632 1.00 39.51 N
ATOM 23 N3 G B2399 58.233 124.853 147.246 1.00 38.15 N
ATOM 24 C4 G B2399 59.526 125.222 147.283 1.00 37.96 C
ATOM 25 P C B2400 60.223 127.725 152.855 1.00 51.88 P
ATOM 26 OP1 C B2400 59.821 128.414 154.107 1.00 51.22 O
ATOM 27 OP2 C B2400 61.643 127.345 152.637 1.00 48.90 O
ATOM 28 O5' C B2400 59.275 126.457 152.705 1.00 49.96 O
TER
Atoms:
OP1: (53.609,127.773,154.273)
OP2: (51.114,127.270,153.999)
C3': (54.206,127.176,149.336)
C1': (54.332,124.877,148.896)
C5': (52.977,126.859,151.458)
O4': (54.040,125.031,150.272)
C8: (51.853,124.309,148.790)
O2': (56.289,126.231,148.630)
C6: (51.320,122.810,145.652)
C5: (51.689,123.429,146.863)
C4: (53.002,123.848,146.979)
P: (52.524,126.795,154.024)
C4': (54.165,126.423,150.645)
C2': (54.901,126.208,148.406)
C2: (53.496,123.150,144.953)
N1: (52.269,122.686,144.698)
N3: (53.965,123.741,146.049)
N6: (50.093,122.339,145.399)
N7: (50.972,123.732,148.016)
N9: (53.115,124.383,148.240)
O5': (52.872,126.089,152.646)
O3': (54.935,128.368,149.506)
OP2: (51.114,127.270,153.999)
C3': (54.206,127.176,149.336)
C1': (54.332,124.877,148.896)
C5': (52.977,126.859,151.458)
O4': (54.040,125.031,150.272)
C8: (51.853,124.309,148.790)
O2': (56.289,126.231,148.630)
C6: (51.320,122.810,145.652)
C5: (51.689,123.429,146.863)
C4: (53.002,123.848,146.979)
P: (52.524,126.795,154.024)
C4': (54.165,126.423,150.645)
C2': (54.901,126.208,148.406)
C2: (53.496,123.150,144.953)
N1: (52.269,122.686,144.698)
N3: (53.965,123.741,146.049)
N6: (50.093,122.339,145.399)
N7: (50.972,123.732,148.016)
N9: (53.115,124.383,148.240)
O5': (52.872,126.089,152.646)
O3': (54.935,128.368,149.506)
OP1: (64.359,129.848,150.584)
OP2: (64.835,127.769,149.158)
C3': (60.007,128.208,150.305)
C1': (59.220,127.574,148.187)
C5': (61.641,129.898,149.385)
O6: (61.327,122.364,146.072)
O4': (59.996,128.756,148.047)
C8: (61.365,126.384,147.555)
C2: (58.083,123.632,146.777)
C6: (60.463,123.178,146.437)
C5: (60.637,124.496,146.917)
C4: (59.526,125.222,147.283)
P: (64.148,129.074,149.337)
C4': (60.237,129.353,149.345)
C2': (58.861,127.443,149.664)
O2': (57.599,128.026,149.920)
N1: (59.118,122.825,146.401)
N2: (56.857,123.116,146.632)
N3: (58.233,124.853,147.246)
N7: (61.788,125.241,147.091)
N9: (60.005,126.443,147.695)
O5': (62.582,128.826,149.204)
O3': (59.748,128.644,151.630)
OP2: (64.835,127.769,149.158)
C3': (60.007,128.208,150.305)
C1': (59.220,127.574,148.187)
C5': (61.641,129.898,149.385)
O6: (61.327,122.364,146.072)
O4': (59.996,128.756,148.047)
C8: (61.365,126.384,147.555)
C2: (58.083,123.632,146.777)
C6: (60.463,123.178,146.437)
C5: (60.637,124.496,146.917)
C4: (59.526,125.222,147.283)
P: (64.148,129.074,149.337)
C4': (60.237,129.353,149.345)
C2': (58.861,127.443,149.664)
O2': (57.599,128.026,149.920)
N1: (59.118,122.825,146.401)
N2: (56.857,123.116,146.632)
N3: (58.233,124.853,147.246)
N7: (61.788,125.241,147.091)
N9: (60.005,126.443,147.695)
O5': (62.582,128.826,149.204)
O3': (59.748,128.644,151.630)
Image (generated by PyMOL):