Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A613:A612
Extra
PDB:
ATOM 1 O3' U A 612 50.824 108.188 86.081 1.00 33.38 O
ATOM 2 P U A 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 3 OP1 U A 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 4 OP2 U A 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 5 O5' U A 613 50.246 106.373 87.797 1.00 34.53 O
ATOM 6 C5' U A 613 51.298 106.538 88.764 1.00 33.63 C
ATOM 7 C4' U A 613 50.739 106.518 90.171 1.00 33.87 C
ATOM 8 O4' U A 613 49.664 107.489 90.288 1.00 34.10 O
ATOM 9 C3' U A 613 50.014 105.266 90.635 1.00 32.98 C
ATOM 10 O3' U A 613 50.910 104.172 90.865 1.00 30.74 O
ATOM 11 C2' U A 613 49.326 105.793 91.897 1.00 32.89 C
ATOM 12 O2' U A 613 50.207 106.011 92.979 1.00 33.48 O
ATOM 13 C1' U A 613 48.904 107.192 91.446 1.00 33.73 C
ATOM 14 N1 U A 613 47.469 107.272 91.140 1.00 35.20 N
ATOM 15 C2 U A 613 46.592 107.403 92.210 1.00 35.56 C
ATOM 16 O2 U A 613 46.961 107.507 93.370 1.00 38.07 O
ATOM 17 N3 U A 613 45.264 107.409 91.870 1.00 35.38 N
ATOM 18 C4 U A 613 44.725 107.313 90.609 1.00 36.51 C
ATOM 19 O4 U A 613 43.502 107.294 90.481 1.00 36.45 O
ATOM 20 C5 U A 613 45.685 107.211 89.555 1.00 37.04 C
ATOM 21 C6 U A 613 46.995 107.196 89.849 1.00 35.92 C
ATOM 22 P U A 614 50.418 102.662 90.586 1.00 30.90 P
ATOM 23 OP1 U A 614 51.520 101.695 90.817 1.00 29.99 O
ATOM 24 OP2 U A 614 49.670 102.602 89.316 1.00 29.30 O
ATOM 25 O5' U A 614 49.364 102.434 91.740 1.00 29.82 O
TER
ATOM 1 O3' U B 611 45.796 110.723 83.262 1.00 30.38 O
ATOM 2 P U B 612 46.342 109.351 83.880 1.00 30.71 P
ATOM 3 OP1 U B 612 47.032 108.600 82.807 1.00 28.97 O
ATOM 4 OP2 U B 612 45.249 108.693 84.645 1.00 31.03 O
ATOM 5 O5' U B 612 47.482 109.838 84.876 1.00 31.12 O
ATOM 6 C5' U B 612 48.796 110.149 84.393 1.00 32.34 C
ATOM 7 C4' U B 612 49.741 110.327 85.556 1.00 33.96 C
ATOM 8 O4' U B 612 49.220 111.397 86.381 1.00 34.37 O
ATOM 9 C3' U B 612 49.876 109.153 86.528 1.00 34.10 C
ATOM 10 O3' U B 612 50.824 108.188 86.081 1.00 33.38 O
ATOM 11 C2' U B 612 50.343 109.845 87.804 1.00 33.81 C
ATOM 12 O2' U B 612 51.704 110.197 87.845 1.00 33.34 O
ATOM 13 C1' U B 612 49.541 111.141 87.743 1.00 35.15 C
ATOM 14 N1 U B 612 48.309 111.010 88.533 1.00 36.09 N
ATOM 15 C2 U B 612 48.451 111.147 89.891 1.00 35.58 C
ATOM 16 O2 U B 612 49.518 111.397 90.431 1.00 36.53 O
ATOM 17 N3 U B 612 47.304 110.985 90.608 1.00 37.06 N
ATOM 18 C4 U B 612 46.041 110.712 90.129 1.00 37.28 C
ATOM 19 O4 U B 612 45.119 110.538 90.934 1.00 36.31 O
ATOM 20 C5 U B 612 45.955 110.599 88.708 1.00 36.77 C
ATOM 21 C6 U B 612 47.068 110.746 87.969 1.00 37.03 C
ATOM 22 P U B 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 23 OP1 U B 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 24 OP2 U B 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 25 O5' U B 613 50.246 106.373 87.797 1.00 34.53 O
TER
ATOM 2 P U A 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 3 OP1 U A 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 4 OP2 U A 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 5 O5' U A 613 50.246 106.373 87.797 1.00 34.53 O
ATOM 6 C5' U A 613 51.298 106.538 88.764 1.00 33.63 C
ATOM 7 C4' U A 613 50.739 106.518 90.171 1.00 33.87 C
ATOM 8 O4' U A 613 49.664 107.489 90.288 1.00 34.10 O
ATOM 9 C3' U A 613 50.014 105.266 90.635 1.00 32.98 C
ATOM 10 O3' U A 613 50.910 104.172 90.865 1.00 30.74 O
ATOM 11 C2' U A 613 49.326 105.793 91.897 1.00 32.89 C
ATOM 12 O2' U A 613 50.207 106.011 92.979 1.00 33.48 O
ATOM 13 C1' U A 613 48.904 107.192 91.446 1.00 33.73 C
ATOM 14 N1 U A 613 47.469 107.272 91.140 1.00 35.20 N
ATOM 15 C2 U A 613 46.592 107.403 92.210 1.00 35.56 C
ATOM 16 O2 U A 613 46.961 107.507 93.370 1.00 38.07 O
ATOM 17 N3 U A 613 45.264 107.409 91.870 1.00 35.38 N
ATOM 18 C4 U A 613 44.725 107.313 90.609 1.00 36.51 C
ATOM 19 O4 U A 613 43.502 107.294 90.481 1.00 36.45 O
ATOM 20 C5 U A 613 45.685 107.211 89.555 1.00 37.04 C
ATOM 21 C6 U A 613 46.995 107.196 89.849 1.00 35.92 C
ATOM 22 P U A 614 50.418 102.662 90.586 1.00 30.90 P
ATOM 23 OP1 U A 614 51.520 101.695 90.817 1.00 29.99 O
ATOM 24 OP2 U A 614 49.670 102.602 89.316 1.00 29.30 O
ATOM 25 O5' U A 614 49.364 102.434 91.740 1.00 29.82 O
TER
ATOM 1 O3' U B 611 45.796 110.723 83.262 1.00 30.38 O
ATOM 2 P U B 612 46.342 109.351 83.880 1.00 30.71 P
ATOM 3 OP1 U B 612 47.032 108.600 82.807 1.00 28.97 O
ATOM 4 OP2 U B 612 45.249 108.693 84.645 1.00 31.03 O
ATOM 5 O5' U B 612 47.482 109.838 84.876 1.00 31.12 O
ATOM 6 C5' U B 612 48.796 110.149 84.393 1.00 32.34 C
ATOM 7 C4' U B 612 49.741 110.327 85.556 1.00 33.96 C
ATOM 8 O4' U B 612 49.220 111.397 86.381 1.00 34.37 O
ATOM 9 C3' U B 612 49.876 109.153 86.528 1.00 34.10 C
ATOM 10 O3' U B 612 50.824 108.188 86.081 1.00 33.38 O
ATOM 11 C2' U B 612 50.343 109.845 87.804 1.00 33.81 C
ATOM 12 O2' U B 612 51.704 110.197 87.845 1.00 33.34 O
ATOM 13 C1' U B 612 49.541 111.141 87.743 1.00 35.15 C
ATOM 14 N1 U B 612 48.309 111.010 88.533 1.00 36.09 N
ATOM 15 C2 U B 612 48.451 111.147 89.891 1.00 35.58 C
ATOM 16 O2 U B 612 49.518 111.397 90.431 1.00 36.53 O
ATOM 17 N3 U B 612 47.304 110.985 90.608 1.00 37.06 N
ATOM 18 C4 U B 612 46.041 110.712 90.129 1.00 37.28 C
ATOM 19 O4 U B 612 45.119 110.538 90.934 1.00 36.31 O
ATOM 20 C5 U B 612 45.955 110.599 88.708 1.00 36.77 C
ATOM 21 C6 U B 612 47.068 110.746 87.969 1.00 37.03 C
ATOM 22 P U B 613 50.529 106.610 86.247 1.00 35.64 P
ATOM 23 OP1 U B 613 51.824 105.959 85.936 1.00 36.00 O
ATOM 24 OP2 U B 613 49.313 106.205 85.505 1.00 34.08 O
ATOM 25 O5' U B 613 50.246 106.373 87.797 1.00 34.53 O
TER
Atoms:
C4: (44.725,107.313,90.609)
N3: (45.264,107.409,91.870)
OP1: (51.824,105.959,85.936)
OP2: (49.313,106.205,85.505)
C2: (46.592,107.403,92.210)
C1': (48.904,107.192,91.446)
C3': (50.014,105.266,90.635)
O5': (50.246,106.373,87.797)
O4': (49.664,107.489,90.288)
C5': (51.298,106.538,88.764)
P: (50.529,106.610,86.247)
C4': (50.739,106.518,90.171)
C2': (49.326,105.793,91.897)
O2': (50.207,106.011,92.979)
N1: (47.469,107.272,91.140)
O4: (43.502,107.294,90.481)
O2: (46.961,107.507,93.370)
C6: (46.995,107.196,89.849)
C5: (45.685,107.211,89.555)
O3': (50.910,104.172,90.865)
N3: (45.264,107.409,91.870)
OP1: (51.824,105.959,85.936)
OP2: (49.313,106.205,85.505)
C2: (46.592,107.403,92.210)
C1': (48.904,107.192,91.446)
C3': (50.014,105.266,90.635)
O5': (50.246,106.373,87.797)
O4': (49.664,107.489,90.288)
C5': (51.298,106.538,88.764)
P: (50.529,106.610,86.247)
C4': (50.739,106.518,90.171)
C2': (49.326,105.793,91.897)
O2': (50.207,106.011,92.979)
N1: (47.469,107.272,91.140)
O4: (43.502,107.294,90.481)
O2: (46.961,107.507,93.370)
C6: (46.995,107.196,89.849)
C5: (45.685,107.211,89.555)
O3': (50.910,104.172,90.865)
C4: (46.041,110.712,90.129)
N3: (47.304,110.985,90.608)
OP1: (47.032,108.600,82.807)
OP2: (45.249,108.693,84.645)
C2: (48.451,111.147,89.891)
C1': (49.541,111.141,87.743)
C3': (49.876,109.153,86.528)
O5': (47.482,109.838,84.876)
O4': (49.220,111.397,86.381)
C5': (48.796,110.149,84.393)
P: (46.342,109.351,83.880)
C4': (49.741,110.327,85.556)
C2': (50.343,109.845,87.804)
O2': (51.704,110.197,87.845)
N1: (48.309,111.010,88.533)
O4: (45.119,110.538,90.934)
O2: (49.518,111.397,90.431)
C6: (47.068,110.746,87.969)
C5: (45.955,110.599,88.708)
O3': (50.824,108.188,86.081)
N3: (47.304,110.985,90.608)
OP1: (47.032,108.600,82.807)
OP2: (45.249,108.693,84.645)
C2: (48.451,111.147,89.891)
C1': (49.541,111.141,87.743)
C3': (49.876,109.153,86.528)
O5': (47.482,109.838,84.876)
O4': (49.220,111.397,86.381)
C5': (48.796,110.149,84.393)
P: (46.342,109.351,83.880)
C4': (49.741,110.327,85.556)
C2': (50.343,109.845,87.804)
O2': (51.704,110.197,87.845)
N1: (48.309,111.010,88.533)
O4: (45.119,110.538,90.934)
O2: (49.518,111.397,90.431)
C6: (47.068,110.746,87.969)
C5: (45.955,110.599,88.708)
O3': (50.824,108.188,86.081)
Image (generated by PyMOL):