Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1962:A1965
Extra
PDB:
ATOM 1 O3' G A1961 -76.473 -13.004 5.620 1.00 0.01 O
ATOM 2 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 3 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 4 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 5 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
ATOM 6 C5' A A1962 -76.465 -10.440 7.765 1.00 0.01 C
ATOM 7 C4' A A1962 -75.122 -10.405 7.090 1.00 0.01 C
ATOM 8 O4' A A1962 -75.278 -9.856 5.774 1.00 0.01 O
ATOM 9 C3' A A1962 -74.061 -9.543 7.755 1.00 0.01 C
ATOM 10 O3' A A1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 11 C2' A A1962 -73.200 -9.096 6.602 1.00 0.01 C
ATOM 12 O2' A A1962 -72.198 -10.045 6.374 1.00 0.01 O
ATOM 13 C1' A A1962 -74.157 -9.115 5.420 1.00 0.01 C
ATOM 14 N9 A A1962 -74.594 -7.782 5.051 1.00 0.12 N
ATOM 15 C8 A A1962 -75.820 -7.217 5.193 1.00 0.12 C
ATOM 16 N7 A A1962 -75.882 -5.984 4.747 1.00 0.12 N
ATOM 17 C5 A A1962 -74.607 -5.744 4.274 1.00 0.12 C
ATOM 18 C6 A A1962 -74.000 -4.637 3.685 1.00 0.12 C
ATOM 19 N6 A A1962 -74.600 -3.488 3.436 1.00 0.12 N
ATOM 20 N1 A A1962 -72.712 -4.744 3.340 1.00 0.12 N
ATOM 21 C2 A A1962 -72.064 -5.890 3.567 1.00 0.12 C
ATOM 22 N3 A A1962 -72.519 -7.012 4.119 1.00 0.12 N
ATOM 23 C4 A A1962 -73.809 -6.858 4.453 1.00 0.12 C
ATOM 24 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 25 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 26 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 27 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
TER
ATOM 1 O3' U B1964 -70.083 -18.549 10.535 1.00 12.12 O
ATOM 2 P G B1965 -69.782 -18.203 9.021 1.00 0.02 P
ATOM 3 OP1 G B1965 -70.920 -18.669 8.223 1.00 0.02 O
ATOM 4 OP2 G B1965 -68.432 -18.737 8.703 1.00 0.02 O
ATOM 5 O5' G B1965 -69.766 -16.624 9.071 1.00 0.02 O
ATOM 6 C5' G B1965 -69.323 -15.852 7.976 1.00 0.02 C
ATOM 7 C4' G B1965 -70.166 -14.626 7.837 1.00 0.02 C
ATOM 8 O4' G B1965 -69.645 -13.558 8.653 1.00 0.02 O
ATOM 9 C3' G B1965 -70.260 -14.028 6.455 1.00 0.02 C
ATOM 10 O3' G B1965 -71.159 -14.736 5.647 1.00 0.02 O
ATOM 11 C2' G B1965 -70.740 -12.629 6.762 1.00 0.02 C
ATOM 12 O2' G B1965 -72.149 -12.638 6.987 1.00 0.02 O
ATOM 13 C1' G B1965 -70.023 -12.331 8.090 1.00 0.02 C
ATOM 14 N9 G B1965 -68.818 -11.516 7.909 1.00 0.01 N
ATOM 15 C8 G B1965 -67.599 -11.845 8.405 1.00 0.01 C
ATOM 16 N7 G B1965 -66.679 -10.963 8.140 1.00 0.01 N
ATOM 17 C5 G B1965 -67.348 -9.989 7.423 1.00 0.01 C
ATOM 18 C6 G B1965 -66.875 -8.788 6.853 1.00 0.01 C
ATOM 19 O6 G B1965 -65.739 -8.342 6.878 1.00 0.01 O
ATOM 20 N1 G B1965 -67.838 -8.061 6.200 1.00 0.01 N
ATOM 21 C2 G B1965 -69.112 -8.450 6.116 1.00 0.01 C
ATOM 22 N2 G B1965 -69.886 -7.614 5.448 1.00 0.01 N
ATOM 23 N3 G B1965 -69.584 -9.567 6.633 1.00 0.01 N
ATOM 24 C4 G B1965 -68.663 -10.307 7.273 1.00 0.01 C
ATOM 25 P G B1966 -70.734 -15.243 4.214 1.00 0.01 P
ATOM 26 OP1 G B1966 -71.528 -16.439 3.946 1.00 0.01 O
ATOM 27 OP2 G B1966 -69.279 -15.350 4.177 1.00 0.01 O
ATOM 28 O5' G B1966 -71.219 -14.058 3.296 1.00 0.01 O
TER
ATOM 2 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 3 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 4 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 5 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
ATOM 6 C5' A A1962 -76.465 -10.440 7.765 1.00 0.01 C
ATOM 7 C4' A A1962 -75.122 -10.405 7.090 1.00 0.01 C
ATOM 8 O4' A A1962 -75.278 -9.856 5.774 1.00 0.01 O
ATOM 9 C3' A A1962 -74.061 -9.543 7.755 1.00 0.01 C
ATOM 10 O3' A A1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 11 C2' A A1962 -73.200 -9.096 6.602 1.00 0.01 C
ATOM 12 O2' A A1962 -72.198 -10.045 6.374 1.00 0.01 O
ATOM 13 C1' A A1962 -74.157 -9.115 5.420 1.00 0.01 C
ATOM 14 N9 A A1962 -74.594 -7.782 5.051 1.00 0.12 N
ATOM 15 C8 A A1962 -75.820 -7.217 5.193 1.00 0.12 C
ATOM 16 N7 A A1962 -75.882 -5.984 4.747 1.00 0.12 N
ATOM 17 C5 A A1962 -74.607 -5.744 4.274 1.00 0.12 C
ATOM 18 C6 A A1962 -74.000 -4.637 3.685 1.00 0.12 C
ATOM 19 N6 A A1962 -74.600 -3.488 3.436 1.00 0.12 N
ATOM 20 N1 A A1962 -72.712 -4.744 3.340 1.00 0.12 N
ATOM 21 C2 A A1962 -72.064 -5.890 3.567 1.00 0.12 C
ATOM 22 N3 A A1962 -72.519 -7.012 4.119 1.00 0.12 N
ATOM 23 C4 A A1962 -73.809 -6.858 4.453 1.00 0.12 C
ATOM 24 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 25 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 26 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 27 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
TER
ATOM 1 O3' U B1964 -70.083 -18.549 10.535 1.00 12.12 O
ATOM 2 P G B1965 -69.782 -18.203 9.021 1.00 0.02 P
ATOM 3 OP1 G B1965 -70.920 -18.669 8.223 1.00 0.02 O
ATOM 4 OP2 G B1965 -68.432 -18.737 8.703 1.00 0.02 O
ATOM 5 O5' G B1965 -69.766 -16.624 9.071 1.00 0.02 O
ATOM 6 C5' G B1965 -69.323 -15.852 7.976 1.00 0.02 C
ATOM 7 C4' G B1965 -70.166 -14.626 7.837 1.00 0.02 C
ATOM 8 O4' G B1965 -69.645 -13.558 8.653 1.00 0.02 O
ATOM 9 C3' G B1965 -70.260 -14.028 6.455 1.00 0.02 C
ATOM 10 O3' G B1965 -71.159 -14.736 5.647 1.00 0.02 O
ATOM 11 C2' G B1965 -70.740 -12.629 6.762 1.00 0.02 C
ATOM 12 O2' G B1965 -72.149 -12.638 6.987 1.00 0.02 O
ATOM 13 C1' G B1965 -70.023 -12.331 8.090 1.00 0.02 C
ATOM 14 N9 G B1965 -68.818 -11.516 7.909 1.00 0.01 N
ATOM 15 C8 G B1965 -67.599 -11.845 8.405 1.00 0.01 C
ATOM 16 N7 G B1965 -66.679 -10.963 8.140 1.00 0.01 N
ATOM 17 C5 G B1965 -67.348 -9.989 7.423 1.00 0.01 C
ATOM 18 C6 G B1965 -66.875 -8.788 6.853 1.00 0.01 C
ATOM 19 O6 G B1965 -65.739 -8.342 6.878 1.00 0.01 O
ATOM 20 N1 G B1965 -67.838 -8.061 6.200 1.00 0.01 N
ATOM 21 C2 G B1965 -69.112 -8.450 6.116 1.00 0.01 C
ATOM 22 N2 G B1965 -69.886 -7.614 5.448 1.00 0.01 N
ATOM 23 N3 G B1965 -69.584 -9.567 6.633 1.00 0.01 N
ATOM 24 C4 G B1965 -68.663 -10.307 7.273 1.00 0.01 C
ATOM 25 P G B1966 -70.734 -15.243 4.214 1.00 0.01 P
ATOM 26 OP1 G B1966 -71.528 -16.439 3.946 1.00 0.01 O
ATOM 27 OP2 G B1966 -69.279 -15.350 4.177 1.00 0.01 O
ATOM 28 O5' G B1966 -71.219 -14.058 3.296 1.00 0.01 O
TER
Atoms:
OP1: (-76.663,-13.248,8.080)
OP2: (-78.721,-13.232,6.619)
C3': (-74.061,-9.543,7.755)
C1': (-74.157,-9.115,5.420)
C5': (-76.465,-10.440,7.765)
O4': (-75.278,-9.856,5.774)
C8: (-75.820,-7.217,5.193)
O2': (-72.198,-10.045,6.374)
C6: (-74.000,-4.637,3.685)
C5: (-74.607,-5.744,4.274)
C4: (-73.809,-6.858,4.453)
P: (-77.378,-12.718,6.906)
C4': (-75.122,-10.405,7.090)
C2': (-73.200,-9.096,6.602)
C2: (-72.064,-5.890,3.567)
N1: (-72.712,-4.744,3.340)
N3: (-72.519,-7.012,4.119)
N6: (-74.600,-3.488,3.436)
N7: (-75.882,-5.984,4.747)
N9: (-74.594,-7.782,5.051)
O5': (-77.409,-11.136,6.972)
O3': (-73.319,-10.256,8.724)
OP2: (-78.721,-13.232,6.619)
C3': (-74.061,-9.543,7.755)
C1': (-74.157,-9.115,5.420)
C5': (-76.465,-10.440,7.765)
O4': (-75.278,-9.856,5.774)
C8: (-75.820,-7.217,5.193)
O2': (-72.198,-10.045,6.374)
C6: (-74.000,-4.637,3.685)
C5: (-74.607,-5.744,4.274)
C4: (-73.809,-6.858,4.453)
P: (-77.378,-12.718,6.906)
C4': (-75.122,-10.405,7.090)
C2': (-73.200,-9.096,6.602)
C2: (-72.064,-5.890,3.567)
N1: (-72.712,-4.744,3.340)
N3: (-72.519,-7.012,4.119)
N6: (-74.600,-3.488,3.436)
N7: (-75.882,-5.984,4.747)
N9: (-74.594,-7.782,5.051)
O5': (-77.409,-11.136,6.972)
O3': (-73.319,-10.256,8.724)
OP1: (-70.920,-18.669,8.223)
OP2: (-68.432,-18.737,8.703)
C3': (-70.260,-14.028,6.455)
C1': (-70.023,-12.331,8.090)
C5': (-69.323,-15.852,7.976)
O6: (-65.739,-8.342,6.878)
O4': (-69.645,-13.558,8.653)
C8: (-67.599,-11.845,8.405)
C2: (-69.112,-8.450,6.116)
C6: (-66.875,-8.788,6.853)
C5: (-67.348,-9.989,7.423)
C4: (-68.663,-10.307,7.273)
P: (-69.782,-18.203,9.021)
C4': (-70.166,-14.626,7.837)
C2': (-70.740,-12.629,6.762)
O2': (-72.149,-12.638,6.987)
N1: (-67.838,-8.061,6.200)
N2: (-69.886,-7.614,5.448)
N3: (-69.584,-9.567,6.633)
N7: (-66.679,-10.963,8.140)
N9: (-68.818,-11.516,7.909)
O5': (-69.766,-16.624,9.071)
O3': (-71.159,-14.736,5.647)
OP2: (-68.432,-18.737,8.703)
C3': (-70.260,-14.028,6.455)
C1': (-70.023,-12.331,8.090)
C5': (-69.323,-15.852,7.976)
O6: (-65.739,-8.342,6.878)
O4': (-69.645,-13.558,8.653)
C8: (-67.599,-11.845,8.405)
C2: (-69.112,-8.450,6.116)
C6: (-66.875,-8.788,6.853)
C5: (-67.348,-9.989,7.423)
C4: (-68.663,-10.307,7.273)
P: (-69.782,-18.203,9.021)
C4': (-70.166,-14.626,7.837)
C2': (-70.740,-12.629,6.762)
O2': (-72.149,-12.638,6.987)
N1: (-67.838,-8.061,6.200)
N2: (-69.886,-7.614,5.448)
N3: (-69.584,-9.567,6.633)
N7: (-66.679,-10.963,8.140)
N9: (-68.818,-11.516,7.909)
O5': (-69.766,-16.624,9.071)
O3': (-71.159,-14.736,5.647)
Image (generated by PyMOL):