Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1986:1985
Extra
PDB:
ATOM 1 O3' U A 985 10.433 -42.874 7.403 1.00 62.03 O
ATOM 2 P U A 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 3 OP1 U A 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 4 OP2 U A 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 5 O5' U A 986 10.984 -40.730 8.626 1.00 53.41 O
ATOM 6 C5' U A 986 10.632 -39.759 7.656 1.00 53.66 C
ATOM 7 C4' U A 986 9.736 -38.697 8.235 1.00 53.38 C
ATOM 8 O4' U A 986 8.610 -39.307 8.914 1.00 53.44 O
ATOM 9 C3' U A 986 10.330 -37.841 9.318 1.00 52.68 C
ATOM 10 O3' U A 986 11.255 -36.887 8.834 1.00 52.52 O
ATOM 11 C2' U A 986 9.076 -37.246 9.985 1.00 52.54 C
ATOM 12 O2' U A 986 8.484 -36.215 9.183 1.00 52.77 O
ATOM 13 C1' U A 986 8.150 -38.448 9.951 1.00 52.95 C
ATOM 14 N1 U A 986 8.153 -39.187 11.221 1.00 52.61 N
ATOM 15 C2 U A 986 7.595 -38.598 12.379 1.00 52.16 C
ATOM 16 O2 U A 986 7.113 -37.487 12.491 1.00 52.00 O
ATOM 17 N3 U A 986 7.638 -39.380 13.485 1.00 51.90 N
ATOM 18 C4 U A 986 8.183 -40.641 13.529 1.00 52.04 C
ATOM 19 O4 U A 986 8.145 -41.200 14.607 1.00 51.77 O
ATOM 20 C5 U A 986 8.730 -41.194 12.318 1.00 52.50 C
ATOM 21 C6 U A 986 8.699 -40.451 11.221 1.00 52.76 C
ATOM 22 P C A 987 12.688 -36.723 9.550 1.00 52.45 P
ATOM 23 OP1 C A 987 13.685 -36.350 8.492 1.00 52.62 O
ATOM 24 OP2 C A 987 12.927 -37.967 10.336 1.00 52.34 O
ATOM 25 O5' C A 987 12.426 -35.505 10.545 1.00 51.89 O
TER
ATOM 1 O3' A B 984 9.248 -49.626 8.018 1.00 65.14 O
ATOM 2 P U B 985 10.262 -48.509 8.484 1.00 62.98 P
ATOM 3 OP1 U B 985 11.580 -48.888 7.920 1.00 63.08 O
ATOM 4 OP2 U B 985 10.091 -48.372 9.961 1.00 62.40 O
ATOM 5 O5' U B 985 9.710 -47.186 7.771 1.00 63.03 O
ATOM 6 C5' U B 985 9.913 -45.909 8.354 1.00 62.45 C
ATOM 7 C4' U B 985 9.041 -44.868 7.718 1.00 62.61 C
ATOM 8 O4' U B 985 7.692 -45.045 8.171 1.00 62.72 O
ATOM 9 C3' U B 985 9.333 -43.423 8.089 1.00 62.08 C
ATOM 10 O3' U B 985 10.433 -42.874 7.403 1.00 62.03 O
ATOM 11 C2' U B 985 8.031 -42.743 7.751 1.00 62.30 C
ATOM 12 O2' U B 985 7.891 -42.611 6.352 1.00 62.87 O
ATOM 13 C1' U B 985 7.043 -43.786 8.230 1.00 62.53 C
ATOM 14 N1 U B 985 6.654 -43.533 9.597 1.00 62.01 N
ATOM 15 C2 U B 985 5.976 -42.353 9.836 1.00 61.79 C
ATOM 16 O2 U B 985 5.677 -41.545 8.971 1.00 62.01 O
ATOM 17 N3 U B 985 5.662 -42.118 11.140 1.00 61.30 N
ATOM 18 C4 U B 985 5.977 -42.966 12.176 1.00 61.03 C
ATOM 19 O4 U B 985 5.633 -42.664 13.319 1.00 60.60 O
ATOM 20 C5 U B 985 6.691 -44.159 11.812 1.00 61.29 C
ATOM 21 C6 U B 985 7.012 -44.414 10.558 1.00 61.77 C
ATOM 22 P U B 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 23 OP1 U B 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 24 OP2 U B 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 25 O5' U B 986 10.984 -40.730 8.626 1.00 53.41 O
TER
ATOM 2 P U A 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 3 OP1 U A 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 4 OP2 U A 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 5 O5' U A 986 10.984 -40.730 8.626 1.00 53.41 O
ATOM 6 C5' U A 986 10.632 -39.759 7.656 1.00 53.66 C
ATOM 7 C4' U A 986 9.736 -38.697 8.235 1.00 53.38 C
ATOM 8 O4' U A 986 8.610 -39.307 8.914 1.00 53.44 O
ATOM 9 C3' U A 986 10.330 -37.841 9.318 1.00 52.68 C
ATOM 10 O3' U A 986 11.255 -36.887 8.834 1.00 52.52 O
ATOM 11 C2' U A 986 9.076 -37.246 9.985 1.00 52.54 C
ATOM 12 O2' U A 986 8.484 -36.215 9.183 1.00 52.77 O
ATOM 13 C1' U A 986 8.150 -38.448 9.951 1.00 52.95 C
ATOM 14 N1 U A 986 8.153 -39.187 11.221 1.00 52.61 N
ATOM 15 C2 U A 986 7.595 -38.598 12.379 1.00 52.16 C
ATOM 16 O2 U A 986 7.113 -37.487 12.491 1.00 52.00 O
ATOM 17 N3 U A 986 7.638 -39.380 13.485 1.00 51.90 N
ATOM 18 C4 U A 986 8.183 -40.641 13.529 1.00 52.04 C
ATOM 19 O4 U A 986 8.145 -41.200 14.607 1.00 51.77 O
ATOM 20 C5 U A 986 8.730 -41.194 12.318 1.00 52.50 C
ATOM 21 C6 U A 986 8.699 -40.451 11.221 1.00 52.76 C
ATOM 22 P C A 987 12.688 -36.723 9.550 1.00 52.45 P
ATOM 23 OP1 C A 987 13.685 -36.350 8.492 1.00 52.62 O
ATOM 24 OP2 C A 987 12.927 -37.967 10.336 1.00 52.34 O
ATOM 25 O5' C A 987 12.426 -35.505 10.545 1.00 51.89 O
TER
ATOM 1 O3' A B 984 9.248 -49.626 8.018 1.00 65.14 O
ATOM 2 P U B 985 10.262 -48.509 8.484 1.00 62.98 P
ATOM 3 OP1 U B 985 11.580 -48.888 7.920 1.00 63.08 O
ATOM 4 OP2 U B 985 10.091 -48.372 9.961 1.00 62.40 O
ATOM 5 O5' U B 985 9.710 -47.186 7.771 1.00 63.03 O
ATOM 6 C5' U B 985 9.913 -45.909 8.354 1.00 62.45 C
ATOM 7 C4' U B 985 9.041 -44.868 7.718 1.00 62.61 C
ATOM 8 O4' U B 985 7.692 -45.045 8.171 1.00 62.72 O
ATOM 9 C3' U B 985 9.333 -43.423 8.089 1.00 62.08 C
ATOM 10 O3' U B 985 10.433 -42.874 7.403 1.00 62.03 O
ATOM 11 C2' U B 985 8.031 -42.743 7.751 1.00 62.30 C
ATOM 12 O2' U B 985 7.891 -42.611 6.352 1.00 62.87 O
ATOM 13 C1' U B 985 7.043 -43.786 8.230 1.00 62.53 C
ATOM 14 N1 U B 985 6.654 -43.533 9.597 1.00 62.01 N
ATOM 15 C2 U B 985 5.976 -42.353 9.836 1.00 61.79 C
ATOM 16 O2 U B 985 5.677 -41.545 8.971 1.00 62.01 O
ATOM 17 N3 U B 985 5.662 -42.118 11.140 1.00 61.30 N
ATOM 18 C4 U B 985 5.977 -42.966 12.176 1.00 61.03 C
ATOM 19 O4 U B 985 5.633 -42.664 13.319 1.00 60.60 O
ATOM 20 C5 U B 985 6.691 -44.159 11.812 1.00 61.29 C
ATOM 21 C6 U B 985 7.012 -44.414 10.558 1.00 61.77 C
ATOM 22 P U B 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 23 OP1 U B 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 24 OP2 U B 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 25 O5' U B 986 10.984 -40.730 8.626 1.00 53.41 O
TER
Atoms:
C4: (8.183,-40.641,13.529)
N3: (7.638,-39.380,13.485)
OP1: (12.738,-41.976,7.241)
OP2: (11.858,-42.977,9.455)
C2: (7.595,-38.598,12.379)
C1': (8.150,-38.448,9.951)
C3': (10.330,-37.841,9.318)
O5': (10.984,-40.730,8.626)
O4': (8.610,-39.307,8.914)
C5': (10.632,-39.759,7.656)
P: (11.622,-42.152,8.218)
C4': (9.736,-38.697,8.235)
C2': (9.076,-37.246,9.985)
O2': (8.484,-36.215,9.183)
N1: (8.153,-39.187,11.221)
O4: (8.145,-41.200,14.607)
O2: (7.113,-37.487,12.491)
C6: (8.699,-40.451,11.221)
C5: (8.730,-41.194,12.318)
O3': (11.255,-36.887,8.834)
N3: (7.638,-39.380,13.485)
OP1: (12.738,-41.976,7.241)
OP2: (11.858,-42.977,9.455)
C2: (7.595,-38.598,12.379)
C1': (8.150,-38.448,9.951)
C3': (10.330,-37.841,9.318)
O5': (10.984,-40.730,8.626)
O4': (8.610,-39.307,8.914)
C5': (10.632,-39.759,7.656)
P: (11.622,-42.152,8.218)
C4': (9.736,-38.697,8.235)
C2': (9.076,-37.246,9.985)
O2': (8.484,-36.215,9.183)
N1: (8.153,-39.187,11.221)
O4: (8.145,-41.200,14.607)
O2: (7.113,-37.487,12.491)
C6: (8.699,-40.451,11.221)
C5: (8.730,-41.194,12.318)
O3': (11.255,-36.887,8.834)
C4: (5.977,-42.966,12.176)
N3: (5.662,-42.118,11.140)
OP1: (11.580,-48.888,7.920)
OP2: (10.091,-48.372,9.961)
C2: (5.976,-42.353,9.836)
C1': (7.043,-43.786,8.230)
C3': (9.333,-43.423,8.089)
O5': (9.710,-47.186,7.771)
O4': (7.692,-45.045,8.171)
C5': (9.913,-45.909,8.354)
P: (10.262,-48.509,8.484)
C4': (9.041,-44.868,7.718)
C2': (8.031,-42.743,7.751)
O2': (7.891,-42.611,6.352)
N1: (6.654,-43.533,9.597)
O4: (5.633,-42.664,13.319)
O2: (5.677,-41.545,8.971)
C6: (7.012,-44.414,10.558)
C5: (6.691,-44.159,11.812)
O3': (10.433,-42.874,7.403)
N3: (5.662,-42.118,11.140)
OP1: (11.580,-48.888,7.920)
OP2: (10.091,-48.372,9.961)
C2: (5.976,-42.353,9.836)
C1': (7.043,-43.786,8.230)
C3': (9.333,-43.423,8.089)
O5': (9.710,-47.186,7.771)
O4': (7.692,-45.045,8.171)
C5': (9.913,-45.909,8.354)
P: (10.262,-48.509,8.484)
C4': (9.041,-44.868,7.718)
C2': (8.031,-42.743,7.751)
O2': (7.891,-42.611,6.352)
N1: (6.654,-43.533,9.597)
O4: (5.633,-42.664,13.319)
O2: (5.677,-41.545,8.971)
C6: (7.012,-44.414,10.558)
C5: (6.691,-44.159,11.812)
O3': (10.433,-42.874,7.403)
Image (generated by PyMOL):