Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1088:A1941
Extra
PDB:
ATOM 1 O3' A A1087 99.898 -79.584 18.706 1.00 57.11 O
ATOM 2 P U A1088 101.254 -79.135 17.977 1.00 59.45 P
ATOM 3 OP1 U A1088 102.155 -78.778 19.096 1.00 57.94 O
ATOM 4 OP2 U A1088 100.960 -78.132 16.916 1.00 50.38 O
ATOM 5 O5' U A1088 101.795 -80.455 17.280 1.00 43.69 O
ATOM 6 C5' U A1088 102.257 -81.546 18.049 1.00 45.97 C
ATOM 7 C4' U A1088 102.355 -82.754 17.176 1.00 50.08 C
ATOM 8 O4' U A1088 101.026 -83.112 16.752 1.00 56.35 O
ATOM 9 C3' U A1088 103.103 -82.547 15.866 1.00 49.81 C
ATOM 10 O3' U A1088 104.508 -82.685 16.026 1.00 54.49 O
ATOM 11 C2' U A1088 102.539 -83.649 14.977 1.00 55.57 C
ATOM 12 O2' U A1088 103.230 -84.876 15.110 1.00 56.33 O
ATOM 13 C1' U A1088 101.129 -83.816 15.544 1.00 54.85 C
ATOM 14 N1 U A1088 100.062 -83.428 14.617 1.00 49.87 N
ATOM 15 C2 U A1088 99.214 -84.431 14.267 1.00 50.89 C
ATOM 16 O2 U A1088 99.239 -85.521 14.795 1.00 48.50 O
ATOM 17 N3 U A1088 98.326 -84.129 13.275 1.00 55.65 N
ATOM 18 C4 U A1088 98.198 -82.945 12.613 1.00 55.66 C
ATOM 19 O4 U A1088 97.624 -82.957 11.522 1.00 57.25 O
ATOM 20 C5 U A1088 99.061 -81.898 13.107 1.00 56.81 C
ATOM 21 C6 U A1088 99.945 -82.174 14.074 1.00 55.82 C
ATOM 22 P C A1089 105.503 -81.599 15.385 1.00 52.16 P
ATOM 23 OP1 C A1089 106.148 -80.833 16.482 1.00 42.56 O
ATOM 24 OP2 C A1089 104.752 -80.871 14.336 1.00 65.06 O
ATOM 25 O5' C A1089 106.607 -82.480 14.640 1.00 54.80 O
TER
ATOM 1 O3' C B1940 92.350 -77.534 13.039 1.00 47.29 O
ATOM 2 P C B1941 93.244 -76.393 12.377 1.00 45.06 P
ATOM 3 OP1 C B1941 93.689 -75.543 13.513 1.00 44.63 O
ATOM 4 OP2 C B1941 92.479 -75.784 11.249 1.00 36.91 O
ATOM 5 O5' C B1941 94.506 -77.180 11.788 1.00 43.85 O
ATOM 6 C5' C B1941 95.790 -76.985 12.374 1.00 49.46 C
ATOM 7 C4' C B1941 96.810 -77.933 11.806 1.00 44.04 C
ATOM 8 O4' C B1941 96.186 -79.212 11.550 1.00 43.52 O
ATOM 9 C3' C B1941 97.452 -77.545 10.489 1.00 44.36 C
ATOM 10 O3' C B1941 98.522 -76.615 10.692 1.00 42.08 O
ATOM 11 C2' C B1941 97.913 -78.896 9.947 1.00 45.41 C
ATOM 12 O2' C B1941 99.128 -79.308 10.529 1.00 46.76 O
ATOM 13 C1' C B1941 96.806 -79.829 10.443 1.00 44.62 C
ATOM 14 N1 C B1941 95.776 -80.097 9.436 1.00 45.47 N
ATOM 15 C2 C B1941 95.931 -81.177 8.560 1.00 47.82 C
ATOM 16 O2 C B1941 96.911 -81.916 8.679 1.00 46.08 O
ATOM 17 N3 C B1941 95.006 -81.389 7.608 1.00 50.21 N
ATOM 18 C4 C B1941 93.953 -80.581 7.516 1.00 50.92 C
ATOM 19 N4 C B1941 93.072 -80.818 6.555 1.00 51.27 N
ATOM 20 C5 C B1941 93.760 -79.490 8.407 1.00 50.24 C
ATOM 21 C6 C B1941 94.684 -79.288 9.344 1.00 47.35 C
ATOM 22 P G B1942 98.978 -75.639 9.483 1.00 51.83 P
ATOM 23 OP1 G B1942 99.773 -74.513 10.037 1.00 45.64 O
ATOM 24 OP2 G B1942 97.801 -75.345 8.610 1.00 51.53 O
ATOM 25 O5' G B1942 99.969 -76.551 8.631 1.00 51.68 O
TER
ATOM 2 P U A1088 101.254 -79.135 17.977 1.00 59.45 P
ATOM 3 OP1 U A1088 102.155 -78.778 19.096 1.00 57.94 O
ATOM 4 OP2 U A1088 100.960 -78.132 16.916 1.00 50.38 O
ATOM 5 O5' U A1088 101.795 -80.455 17.280 1.00 43.69 O
ATOM 6 C5' U A1088 102.257 -81.546 18.049 1.00 45.97 C
ATOM 7 C4' U A1088 102.355 -82.754 17.176 1.00 50.08 C
ATOM 8 O4' U A1088 101.026 -83.112 16.752 1.00 56.35 O
ATOM 9 C3' U A1088 103.103 -82.547 15.866 1.00 49.81 C
ATOM 10 O3' U A1088 104.508 -82.685 16.026 1.00 54.49 O
ATOM 11 C2' U A1088 102.539 -83.649 14.977 1.00 55.57 C
ATOM 12 O2' U A1088 103.230 -84.876 15.110 1.00 56.33 O
ATOM 13 C1' U A1088 101.129 -83.816 15.544 1.00 54.85 C
ATOM 14 N1 U A1088 100.062 -83.428 14.617 1.00 49.87 N
ATOM 15 C2 U A1088 99.214 -84.431 14.267 1.00 50.89 C
ATOM 16 O2 U A1088 99.239 -85.521 14.795 1.00 48.50 O
ATOM 17 N3 U A1088 98.326 -84.129 13.275 1.00 55.65 N
ATOM 18 C4 U A1088 98.198 -82.945 12.613 1.00 55.66 C
ATOM 19 O4 U A1088 97.624 -82.957 11.522 1.00 57.25 O
ATOM 20 C5 U A1088 99.061 -81.898 13.107 1.00 56.81 C
ATOM 21 C6 U A1088 99.945 -82.174 14.074 1.00 55.82 C
ATOM 22 P C A1089 105.503 -81.599 15.385 1.00 52.16 P
ATOM 23 OP1 C A1089 106.148 -80.833 16.482 1.00 42.56 O
ATOM 24 OP2 C A1089 104.752 -80.871 14.336 1.00 65.06 O
ATOM 25 O5' C A1089 106.607 -82.480 14.640 1.00 54.80 O
TER
ATOM 1 O3' C B1940 92.350 -77.534 13.039 1.00 47.29 O
ATOM 2 P C B1941 93.244 -76.393 12.377 1.00 45.06 P
ATOM 3 OP1 C B1941 93.689 -75.543 13.513 1.00 44.63 O
ATOM 4 OP2 C B1941 92.479 -75.784 11.249 1.00 36.91 O
ATOM 5 O5' C B1941 94.506 -77.180 11.788 1.00 43.85 O
ATOM 6 C5' C B1941 95.790 -76.985 12.374 1.00 49.46 C
ATOM 7 C4' C B1941 96.810 -77.933 11.806 1.00 44.04 C
ATOM 8 O4' C B1941 96.186 -79.212 11.550 1.00 43.52 O
ATOM 9 C3' C B1941 97.452 -77.545 10.489 1.00 44.36 C
ATOM 10 O3' C B1941 98.522 -76.615 10.692 1.00 42.08 O
ATOM 11 C2' C B1941 97.913 -78.896 9.947 1.00 45.41 C
ATOM 12 O2' C B1941 99.128 -79.308 10.529 1.00 46.76 O
ATOM 13 C1' C B1941 96.806 -79.829 10.443 1.00 44.62 C
ATOM 14 N1 C B1941 95.776 -80.097 9.436 1.00 45.47 N
ATOM 15 C2 C B1941 95.931 -81.177 8.560 1.00 47.82 C
ATOM 16 O2 C B1941 96.911 -81.916 8.679 1.00 46.08 O
ATOM 17 N3 C B1941 95.006 -81.389 7.608 1.00 50.21 N
ATOM 18 C4 C B1941 93.953 -80.581 7.516 1.00 50.92 C
ATOM 19 N4 C B1941 93.072 -80.818 6.555 1.00 51.27 N
ATOM 20 C5 C B1941 93.760 -79.490 8.407 1.00 50.24 C
ATOM 21 C6 C B1941 94.684 -79.288 9.344 1.00 47.35 C
ATOM 22 P G B1942 98.978 -75.639 9.483 1.00 51.83 P
ATOM 23 OP1 G B1942 99.773 -74.513 10.037 1.00 45.64 O
ATOM 24 OP2 G B1942 97.801 -75.345 8.610 1.00 51.53 O
ATOM 25 O5' G B1942 99.969 -76.551 8.631 1.00 51.68 O
TER
Atoms:
C4: (98.198,-82.945,12.613)
N3: (98.326,-84.129,13.275)
OP1: (102.155,-78.778,19.096)
OP2: (100.960,-78.132,16.916)
C2: (99.214,-84.431,14.267)
C1': (101.129,-83.816,15.544)
C3': (103.103,-82.547,15.866)
O5': (101.795,-80.455,17.280)
O4': (101.026,-83.112,16.752)
C5': (102.257,-81.546,18.049)
P: (101.254,-79.135,17.977)
C4': (102.355,-82.754,17.176)
C2': (102.539,-83.649,14.977)
O2': (103.230,-84.876,15.110)
N1: (100.062,-83.428,14.617)
O4: (97.624,-82.957,11.522)
O2: (99.239,-85.521,14.795)
C6: (99.945,-82.174,14.074)
C5: (99.061,-81.898,13.107)
O3': (104.508,-82.685,16.026)
N3: (98.326,-84.129,13.275)
OP1: (102.155,-78.778,19.096)
OP2: (100.960,-78.132,16.916)
C2: (99.214,-84.431,14.267)
C1': (101.129,-83.816,15.544)
C3': (103.103,-82.547,15.866)
O5': (101.795,-80.455,17.280)
O4': (101.026,-83.112,16.752)
C5': (102.257,-81.546,18.049)
P: (101.254,-79.135,17.977)
C4': (102.355,-82.754,17.176)
C2': (102.539,-83.649,14.977)
O2': (103.230,-84.876,15.110)
N1: (100.062,-83.428,14.617)
O4: (97.624,-82.957,11.522)
O2: (99.239,-85.521,14.795)
C6: (99.945,-82.174,14.074)
C5: (99.061,-81.898,13.107)
O3': (104.508,-82.685,16.026)
C2: (95.931,-81.177,8.560)
OP1: (93.689,-75.543,13.513)
OP2: (92.479,-75.784,11.249)
C4: (93.953,-80.581,7.516)
O5': (94.506,-77.180,11.788)
C3': (97.452,-77.545,10.489)
C1': (96.806,-79.829,10.443)
O4': (96.186,-79.212,11.550)
C5': (95.790,-76.985,12.374)
P: (93.244,-76.393,12.377)
O2: (96.911,-81.916,8.679)
C4': (96.810,-77.933,11.806)
C2': (97.913,-78.896,9.947)
O2': (99.128,-79.308,10.529)
N1: (95.776,-80.097,9.436)
N3: (95.006,-81.389,7.608)
N4: (93.072,-80.818,6.555)
C6: (94.684,-79.288,9.344)
C5: (93.760,-79.490,8.407)
O3': (98.522,-76.615,10.692)
OP1: (93.689,-75.543,13.513)
OP2: (92.479,-75.784,11.249)
C4: (93.953,-80.581,7.516)
O5': (94.506,-77.180,11.788)
C3': (97.452,-77.545,10.489)
C1': (96.806,-79.829,10.443)
O4': (96.186,-79.212,11.550)
C5': (95.790,-76.985,12.374)
P: (93.244,-76.393,12.377)
O2: (96.911,-81.916,8.679)
C4': (96.810,-77.933,11.806)
C2': (97.913,-78.896,9.947)
O2': (99.128,-79.308,10.529)
N1: (95.776,-80.097,9.436)
N3: (95.006,-81.389,7.608)
N4: (93.072,-80.818,6.555)
C6: (94.684,-79.288,9.344)
C5: (93.760,-79.490,8.407)
O3': (98.522,-76.615,10.692)
Image (generated by PyMOL):