Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2876:A2809
Extra
PDB:
ATOM 1 O3' A A2875 -18.893 -88.198 -27.812 1.00 0.01 O
ATOM 2 P A A2876 -19.713 -89.574 -27.843 1.00 0.01 P
ATOM 3 OP1 A A2876 -20.751 -89.455 -26.820 1.00 0.01 O
ATOM 4 OP2 A A2876 -18.728 -90.673 -27.731 1.00 0.01 O
ATOM 5 O5' A A2876 -20.381 -89.590 -29.291 1.00 0.01 O
ATOM 6 C5' A A2876 -21.293 -90.619 -29.670 1.00 0.01 C
ATOM 7 C4' A A2876 -22.706 -90.088 -29.838 1.00 0.01 C
ATOM 8 O4' A A2876 -22.706 -88.934 -30.704 1.00 0.01 O
ATOM 9 C3' A A2876 -23.725 -91.008 -30.500 1.00 0.01 C
ATOM 10 O3' A A2876 -24.222 -91.995 -29.629 1.00 0.01 O
ATOM 11 C2' A A2876 -24.796 -90.022 -30.920 1.00 0.01 C
ATOM 12 O2' A A2876 -25.605 -89.667 -29.815 1.00 0.01 O
ATOM 13 C1' A A2876 -23.967 -88.808 -31.318 1.00 0.01 C
ATOM 14 N9 A A2876 -23.787 -88.726 -32.769 1.00 0.01 N
ATOM 15 C8 A A2876 -22.676 -88.928 -33.516 1.00 0.01 C
ATOM 16 N7 A A2876 -22.881 -88.795 -34.798 1.00 0.01 N
ATOM 17 C5 A A2876 -24.214 -88.475 -34.891 1.00 0.01 C
ATOM 18 C6 A A2876 -25.053 -88.197 -35.983 1.00 0.01 C
ATOM 19 N6 A A2876 -24.639 -88.199 -37.254 1.00 0.01 N
ATOM 20 N1 A A2876 -26.349 -87.919 -35.745 1.00 0.01 N
ATOM 21 C2 A A2876 -26.746 -87.916 -34.481 1.00 0.01 C
ATOM 22 N3 A A2876 -26.050 -88.159 -33.377 1.00 0.01 N
ATOM 23 C4 A A2876 -24.777 -88.434 -33.652 1.00 0.01 C
ATOM 24 P U A2877 -23.924 -93.529 -29.888 1.00 15.35 P
ATOM 25 OP1 U A2877 -24.621 -93.918 -31.124 1.00 15.35 O
ATOM 26 OP2 U A2877 -24.243 -94.234 -28.654 1.00 15.35 O
ATOM 27 O5' U A2877 -22.366 -93.541 -30.116 1.00 15.35 O
TER
ATOM 1 O3' C B2808 -28.665 -90.137 -21.662 1.00 0.01 O
ATOM 2 P G B2809 -28.986 -88.618 -22.039 1.00 0.01 P
ATOM 3 OP1 G B2809 -28.409 -87.785 -20.984 1.00 0.01 O
ATOM 4 OP2 G B2809 -30.431 -88.528 -22.316 1.00 0.01 O
ATOM 5 O5' G B2809 -28.180 -88.427 -23.373 1.00 0.01 O
ATOM 6 C5' G B2809 -26.798 -88.712 -23.418 1.00 0.01 C
ATOM 7 C4' G B2809 -26.311 -88.837 -24.832 1.00 0.01 C
ATOM 8 O4' G B2809 -26.968 -89.943 -25.478 1.00 0.01 O
ATOM 9 C3' G B2809 -26.620 -87.675 -25.746 1.00 0.01 C
ATOM 10 O3' G B2809 -25.765 -86.581 -25.560 1.00 0.01 O
ATOM 11 C2' G B2809 -26.478 -88.315 -27.097 1.00 0.01 C
ATOM 12 O2' G B2809 -25.114 -88.535 -27.388 1.00 0.01 O
ATOM 13 C1' G B2809 -27.120 -89.656 -26.842 1.00 0.01 C
ATOM 14 N9 G B2809 -28.541 -89.658 -27.167 1.00 0.01 N
ATOM 15 C8 G B2809 -29.616 -89.808 -26.336 1.00 0.01 C
ATOM 16 N7 G B2809 -30.760 -89.812 -26.985 1.00 0.01 N
ATOM 17 C5 G B2809 -30.406 -89.665 -28.332 1.00 0.01 C
ATOM 18 C6 G B2809 -31.179 -89.595 -29.531 1.00 0.01 C
ATOM 19 O6 G B2809 -32.406 -89.642 -29.707 1.00 0.01 O
ATOM 20 N1 G B2809 -30.388 -89.433 -30.643 1.00 0.01 N
ATOM 21 C2 G B2809 -29.044 -89.358 -30.625 1.00 0.01 C
ATOM 22 N2 G B2809 -28.461 -89.213 -31.804 1.00 0.01 N
ATOM 23 N3 G B2809 -28.304 -89.432 -29.546 1.00 0.01 N
ATOM 24 C4 G B2809 -29.039 -89.575 -28.440 1.00 0.01 C
ATOM 25 P U B2810 -26.357 -85.112 -25.601 1.00 0.01 P
ATOM 26 OP1 U B2810 -25.375 -84.237 -24.985 1.00 0.01 O
ATOM 27 OP2 U B2810 -27.701 -85.167 -25.035 1.00 0.01 O
ATOM 28 O5' U B2810 -26.443 -84.810 -27.147 1.00 0.01 O
TER
ATOM 2 P A A2876 -19.713 -89.574 -27.843 1.00 0.01 P
ATOM 3 OP1 A A2876 -20.751 -89.455 -26.820 1.00 0.01 O
ATOM 4 OP2 A A2876 -18.728 -90.673 -27.731 1.00 0.01 O
ATOM 5 O5' A A2876 -20.381 -89.590 -29.291 1.00 0.01 O
ATOM 6 C5' A A2876 -21.293 -90.619 -29.670 1.00 0.01 C
ATOM 7 C4' A A2876 -22.706 -90.088 -29.838 1.00 0.01 C
ATOM 8 O4' A A2876 -22.706 -88.934 -30.704 1.00 0.01 O
ATOM 9 C3' A A2876 -23.725 -91.008 -30.500 1.00 0.01 C
ATOM 10 O3' A A2876 -24.222 -91.995 -29.629 1.00 0.01 O
ATOM 11 C2' A A2876 -24.796 -90.022 -30.920 1.00 0.01 C
ATOM 12 O2' A A2876 -25.605 -89.667 -29.815 1.00 0.01 O
ATOM 13 C1' A A2876 -23.967 -88.808 -31.318 1.00 0.01 C
ATOM 14 N9 A A2876 -23.787 -88.726 -32.769 1.00 0.01 N
ATOM 15 C8 A A2876 -22.676 -88.928 -33.516 1.00 0.01 C
ATOM 16 N7 A A2876 -22.881 -88.795 -34.798 1.00 0.01 N
ATOM 17 C5 A A2876 -24.214 -88.475 -34.891 1.00 0.01 C
ATOM 18 C6 A A2876 -25.053 -88.197 -35.983 1.00 0.01 C
ATOM 19 N6 A A2876 -24.639 -88.199 -37.254 1.00 0.01 N
ATOM 20 N1 A A2876 -26.349 -87.919 -35.745 1.00 0.01 N
ATOM 21 C2 A A2876 -26.746 -87.916 -34.481 1.00 0.01 C
ATOM 22 N3 A A2876 -26.050 -88.159 -33.377 1.00 0.01 N
ATOM 23 C4 A A2876 -24.777 -88.434 -33.652 1.00 0.01 C
ATOM 24 P U A2877 -23.924 -93.529 -29.888 1.00 15.35 P
ATOM 25 OP1 U A2877 -24.621 -93.918 -31.124 1.00 15.35 O
ATOM 26 OP2 U A2877 -24.243 -94.234 -28.654 1.00 15.35 O
ATOM 27 O5' U A2877 -22.366 -93.541 -30.116 1.00 15.35 O
TER
ATOM 1 O3' C B2808 -28.665 -90.137 -21.662 1.00 0.01 O
ATOM 2 P G B2809 -28.986 -88.618 -22.039 1.00 0.01 P
ATOM 3 OP1 G B2809 -28.409 -87.785 -20.984 1.00 0.01 O
ATOM 4 OP2 G B2809 -30.431 -88.528 -22.316 1.00 0.01 O
ATOM 5 O5' G B2809 -28.180 -88.427 -23.373 1.00 0.01 O
ATOM 6 C5' G B2809 -26.798 -88.712 -23.418 1.00 0.01 C
ATOM 7 C4' G B2809 -26.311 -88.837 -24.832 1.00 0.01 C
ATOM 8 O4' G B2809 -26.968 -89.943 -25.478 1.00 0.01 O
ATOM 9 C3' G B2809 -26.620 -87.675 -25.746 1.00 0.01 C
ATOM 10 O3' G B2809 -25.765 -86.581 -25.560 1.00 0.01 O
ATOM 11 C2' G B2809 -26.478 -88.315 -27.097 1.00 0.01 C
ATOM 12 O2' G B2809 -25.114 -88.535 -27.388 1.00 0.01 O
ATOM 13 C1' G B2809 -27.120 -89.656 -26.842 1.00 0.01 C
ATOM 14 N9 G B2809 -28.541 -89.658 -27.167 1.00 0.01 N
ATOM 15 C8 G B2809 -29.616 -89.808 -26.336 1.00 0.01 C
ATOM 16 N7 G B2809 -30.760 -89.812 -26.985 1.00 0.01 N
ATOM 17 C5 G B2809 -30.406 -89.665 -28.332 1.00 0.01 C
ATOM 18 C6 G B2809 -31.179 -89.595 -29.531 1.00 0.01 C
ATOM 19 O6 G B2809 -32.406 -89.642 -29.707 1.00 0.01 O
ATOM 20 N1 G B2809 -30.388 -89.433 -30.643 1.00 0.01 N
ATOM 21 C2 G B2809 -29.044 -89.358 -30.625 1.00 0.01 C
ATOM 22 N2 G B2809 -28.461 -89.213 -31.804 1.00 0.01 N
ATOM 23 N3 G B2809 -28.304 -89.432 -29.546 1.00 0.01 N
ATOM 24 C4 G B2809 -29.039 -89.575 -28.440 1.00 0.01 C
ATOM 25 P U B2810 -26.357 -85.112 -25.601 1.00 0.01 P
ATOM 26 OP1 U B2810 -25.375 -84.237 -24.985 1.00 0.01 O
ATOM 27 OP2 U B2810 -27.701 -85.167 -25.035 1.00 0.01 O
ATOM 28 O5' U B2810 -26.443 -84.810 -27.147 1.00 0.01 O
TER
Atoms:
OP1: (-20.751,-89.455,-26.820)
OP2: (-18.728,-90.673,-27.731)
C3': (-23.725,-91.008,-30.500)
C1': (-23.967,-88.808,-31.318)
C5': (-21.293,-90.619,-29.670)
O4': (-22.706,-88.934,-30.704)
C8: (-22.676,-88.928,-33.516)
O2': (-25.605,-89.667,-29.815)
C6: (-25.053,-88.197,-35.983)
C5: (-24.214,-88.475,-34.891)
C4: (-24.777,-88.434,-33.652)
P: (-19.713,-89.574,-27.843)
C4': (-22.706,-90.088,-29.838)
C2': (-24.796,-90.022,-30.920)
C2: (-26.746,-87.916,-34.481)
N1: (-26.349,-87.919,-35.745)
N3: (-26.050,-88.159,-33.377)
N6: (-24.639,-88.199,-37.254)
N7: (-22.881,-88.795,-34.798)
N9: (-23.787,-88.726,-32.769)
O5': (-20.381,-89.590,-29.291)
O3': (-24.222,-91.995,-29.629)
OP2: (-18.728,-90.673,-27.731)
C3': (-23.725,-91.008,-30.500)
C1': (-23.967,-88.808,-31.318)
C5': (-21.293,-90.619,-29.670)
O4': (-22.706,-88.934,-30.704)
C8: (-22.676,-88.928,-33.516)
O2': (-25.605,-89.667,-29.815)
C6: (-25.053,-88.197,-35.983)
C5: (-24.214,-88.475,-34.891)
C4: (-24.777,-88.434,-33.652)
P: (-19.713,-89.574,-27.843)
C4': (-22.706,-90.088,-29.838)
C2': (-24.796,-90.022,-30.920)
C2: (-26.746,-87.916,-34.481)
N1: (-26.349,-87.919,-35.745)
N3: (-26.050,-88.159,-33.377)
N6: (-24.639,-88.199,-37.254)
N7: (-22.881,-88.795,-34.798)
N9: (-23.787,-88.726,-32.769)
O5': (-20.381,-89.590,-29.291)
O3': (-24.222,-91.995,-29.629)
OP1: (-28.409,-87.785,-20.984)
OP2: (-30.431,-88.528,-22.316)
C3': (-26.620,-87.675,-25.746)
C1': (-27.120,-89.656,-26.842)
C5': (-26.798,-88.712,-23.418)
O6: (-32.406,-89.642,-29.707)
O4': (-26.968,-89.943,-25.478)
C8: (-29.616,-89.808,-26.336)
C2: (-29.044,-89.358,-30.625)
C6: (-31.179,-89.595,-29.531)
C5: (-30.406,-89.665,-28.332)
C4: (-29.039,-89.575,-28.440)
P: (-28.986,-88.618,-22.039)
C4': (-26.311,-88.837,-24.832)
C2': (-26.478,-88.315,-27.097)
O2': (-25.114,-88.535,-27.388)
N1: (-30.388,-89.433,-30.643)
N2: (-28.461,-89.213,-31.804)
N3: (-28.304,-89.432,-29.546)
N7: (-30.760,-89.812,-26.985)
N9: (-28.541,-89.658,-27.167)
O5': (-28.180,-88.427,-23.373)
O3': (-25.765,-86.581,-25.560)
OP2: (-30.431,-88.528,-22.316)
C3': (-26.620,-87.675,-25.746)
C1': (-27.120,-89.656,-26.842)
C5': (-26.798,-88.712,-23.418)
O6: (-32.406,-89.642,-29.707)
O4': (-26.968,-89.943,-25.478)
C8: (-29.616,-89.808,-26.336)
C2: (-29.044,-89.358,-30.625)
C6: (-31.179,-89.595,-29.531)
C5: (-30.406,-89.665,-28.332)
C4: (-29.039,-89.575,-28.440)
P: (-28.986,-88.618,-22.039)
C4': (-26.311,-88.837,-24.832)
C2': (-26.478,-88.315,-27.097)
O2': (-25.114,-88.535,-27.388)
N1: (-30.388,-89.433,-30.643)
N2: (-28.461,-89.213,-31.804)
N3: (-28.304,-89.432,-29.546)
N7: (-30.760,-89.812,-26.985)
N9: (-28.541,-89.658,-27.167)
O5': (-28.180,-88.427,-23.373)
O3': (-25.765,-86.581,-25.560)
Image (generated by PyMOL):