ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:01953:02468

Extra

PDB:
ATOM 1 O3' C A1952 101.369 107.369 107.046 1.00 72.25 O
ATOM 2 P A A1953 101.945 107.069 105.568 1.00 74.64 P
ATOM 3 OP1 A A1953 100.793 106.751 104.672 1.00 73.65 O
ATOM 4 OP2 A A1953 103.081 106.101 105.681 1.00 74.36 O
ATOM 5 O5' A A1953 102.543 108.462 105.097 1.00 71.51 O
ATOM 6 C5' A A1953 103.074 108.609 103.777 1.00 70.82 C
ATOM 7 C4' A A1953 102.708 109.960 103.219 1.00 69.92 C
ATOM 8 O4' A A1953 101.343 109.979 102.719 1.00 69.38 O
ATOM 9 C3' A A1953 102.830 111.114 104.203 1.00 69.09 C
ATOM 10 O3' A A1953 103.317 112.227 103.485 1.00 70.07 O
ATOM 11 C2' A A1953 101.381 111.391 104.588 1.00 68.21 C
ATOM 12 O2' A A1953 101.171 112.735 104.964 1.00 68.07 O
ATOM 13 C1' A A1953 100.659 111.077 103.280 1.00 67.88 C
ATOM 14 N9 A A1953 99.246 110.732 103.431 1.00 67.60 N
ATOM 15 C8 A A1953 98.679 109.660 104.071 1.00 67.55 C
ATOM 16 N7 A A1953 97.371 109.653 104.029 1.00 67.76 N
ATOM 17 C5 A A1953 97.056 110.795 103.308 1.00 68.32 C
ATOM 18 C6 A A1953 95.835 111.357 102.922 1.00 68.98 C
ATOM 19 N6 A A1953 94.649 110.832 103.233 1.00 70.09 N
ATOM 20 N1 A A1953 95.870 112.502 102.205 1.00 68.82 N
ATOM 21 C2 A A1953 97.058 113.041 101.920 1.00 66.89 C
ATOM 22 N3 A A1953 98.268 112.611 102.236 1.00 67.02 N
ATOM 23 C4 A A1953 98.199 111.468 102.935 1.00 67.53 C
ATOM 24 P U A1954 104.718 112.900 103.882 1.00 69.17 P
ATOM 25 OP1 U A1954 105.800 112.096 103.252 1.00 66.99 O
ATOM 26 OP2 U A1954 104.758 113.177 105.334 1.00 69.14 O
ATOM 27 O5' U A1954 104.594 114.301 103.152 1.00 68.07 O
TER

ATOM 1 O3' C B2467 102.277 120.453 97.628 1.00 53.77 O
ATOM 2 P G B2468 102.588 118.986 97.066 1.00 55.09 P
ATOM 3 OP1 G B2468 104.046 118.826 97.231 1.00 55.78 O
ATOM 4 OP2 G B2468 101.981 118.796 95.717 1.00 52.63 O
ATOM 5 O5' G B2468 101.835 118.020 98.088 1.00 51.39 O
ATOM 6 C5' G B2468 102.372 117.740 99.381 1.00 49.89 C
ATOM 7 C4' G B2468 101.493 116.743 100.107 1.00 51.34 C
ATOM 8 O4' G B2468 100.201 117.343 100.368 1.00 51.54 O
ATOM 9 C3' G B2468 101.176 115.468 99.345 1.00 51.12 C
ATOM 10 O3' G B2468 102.165 114.483 99.522 1.00 52.61 O
ATOM 11 C2' G B2468 99.862 115.036 99.958 1.00 51.24 C
ATOM 12 O2' G B2468 100.085 114.400 101.189 1.00 52.42 O
ATOM 13 C1' G B2468 99.176 116.382 100.177 1.00 52.36 C
ATOM 14 N9 G B2468 98.391 116.773 99.003 1.00 53.98 N
ATOM 15 C8 G B2468 98.809 117.538 97.934 1.00 54.15 C
ATOM 16 N7 G B2468 97.888 117.694 97.026 1.00 53.99 N
ATOM 17 C5 G B2468 96.790 117.007 97.531 1.00 54.18 C
ATOM 18 C6 G B2468 95.482 116.831 96.995 1.00 54.83 C
ATOM 19 O6 G B2468 94.998 117.312 95.956 1.00 52.74 O
ATOM 20 N1 G B2468 94.708 116.019 97.814 1.00 52.63 N
ATOM 21 C2 G B2468 95.123 115.480 99.006 1.00 53.04 C
ATOM 22 N2 G B2468 94.250 114.704 99.643 1.00 54.43 N
ATOM 23 N3 G B2468 96.308 115.675 99.533 1.00 52.93 N
ATOM 24 C4 G B2468 97.090 116.430 98.746 1.00 53.21 C
ATOM 25 P U B2469 102.483 113.463 98.331 1.00 55.60 P
ATOM 26 OP1 U B2469 103.675 112.706 98.773 1.00 58.93 O
ATOM 27 OP2 U B2469 102.519 114.207 97.048 1.00 54.61 O
ATOM 28 O5' U B2469 101.234 112.475 98.321 1.00 55.39 O
TER

Atoms:
OP1: (100.793,106.751,104.672)
OP2: (103.081,106.101,105.681)
C3': (102.830,111.114,104.203)
C1': (100.659,111.077,103.280)
C5': (103.074,108.609,103.777)
O4': (101.343,109.979,102.719)
C8: (98.679,109.660,104.071)
O2': (101.171,112.735,104.964)
C6: (95.835,111.357,102.922)
C5: (97.056,110.795,103.308)
C4: (98.199,111.468,102.935)
P: (101.945,107.069,105.568)
C4': (102.708,109.960,103.219)
C2': (101.381,111.391,104.588)
C2: (97.058,113.041,101.920)
N1: (95.870,112.502,102.205)
N3: (98.268,112.611,102.236)
N6: (94.649,110.832,103.233)
N7: (97.371,109.653,104.029)
N9: (99.246,110.732,103.431)
O5': (102.543,108.462,105.097)
O3': (103.317,112.227,103.485)
OP1: (104.046,118.826,97.231)
OP2: (101.981,118.796,95.717)
C3': (101.176,115.468,99.345)
C1': (99.176,116.382,100.177)
C5': (102.372,117.740,99.381)
O6: (94.998,117.312,95.956)
O4': (100.201,117.343,100.368)
C8: (98.809,117.538,97.934)
C2: (95.123,115.480,99.006)
C6: (95.482,116.831,96.995)
C5: (96.790,117.007,97.531)
C4: (97.090,116.430,98.746)
P: (102.588,118.986,97.066)
C4': (101.493,116.743,100.107)
C2': (99.862,115.036,99.958)
O2': (100.085,114.400,101.189)
N1: (94.708,116.019,97.814)
N2: (94.250,114.704,99.643)
N3: (96.308,115.675,99.533)
N7: (97.888,117.694,97.026)
N9: (98.391,116.773,99.003)
O5': (101.835,118.020,98.088)
O3': (102.165,114.483,99.522)
Image (generated by PyMOL):
PyMOL image
show in jmol