Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A60:A59
Extra
PDB:
ATOM 1 O3' U A 59 -9.656 -9.406 17.704 1.00 40.83 O
ATOM 2 P U A 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 3 OP1 U A 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 4 OP2 U A 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 5 O5' U A 60 -7.707 -9.904 16.131 1.00 40.02 O
ATOM 6 C5' U A 60 -8.094 -11.269 16.057 1.00 40.48 C
ATOM 7 C4' U A 60 -7.837 -11.832 14.669 1.00 39.97 C
ATOM 8 O4' U A 60 -8.953 -11.506 13.806 1.00 40.94 O
ATOM 9 C3' U A 60 -6.622 -11.312 13.913 1.00 40.96 C
ATOM 10 O3' U A 60 -5.424 -11.971 14.314 1.00 42.65 O
ATOM 11 C2' U A 60 -6.986 -11.635 12.469 1.00 39.22 C
ATOM 12 O2' U A 60 -6.790 -12.980 12.105 1.00 41.34 O
ATOM 13 C1' U A 60 -8.489 -11.348 12.471 1.00 39.08 C
ATOM 14 N1 U A 60 -8.734 -9.964 12.063 1.00 37.82 N
ATOM 15 C2 U A 60 -8.782 -9.707 10.701 1.00 35.53 C
ATOM 16 O2 U A 60 -8.622 -10.575 9.865 1.00 37.88 O
ATOM 17 N3 U A 60 -8.994 -8.407 10.372 1.00 33.75 N
ATOM 18 C4 U A 60 -9.120 -7.349 11.238 1.00 34.00 C
ATOM 19 O4 U A 60 -9.107 -6.232 10.791 1.00 32.25 O
ATOM 20 C5 U A 60 -9.080 -7.693 12.634 1.00 33.87 C
ATOM 21 C6 U A 60 -8.892 -8.958 12.989 1.00 34.80 C
ATOM 22 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 23 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 24 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 25 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
TER
ATOM 1 O3' A B 58 -13.611 -4.689 17.833 1.00 41.41 O
ATOM 2 P U B 59 -12.007 -4.752 17.705 1.00 43.42 P
ATOM 3 OP1 U B 59 -11.511 -4.398 19.070 1.00 43.85 O
ATOM 4 OP2 U B 59 -11.541 -3.975 16.511 1.00 43.00 O
ATOM 5 O5' U B 59 -11.680 -6.286 17.404 1.00 42.00 O
ATOM 6 C5' U B 59 -12.013 -7.314 18.327 1.00 40.96 C
ATOM 7 C4' U B 59 -11.981 -8.647 17.627 1.00 40.87 C
ATOM 8 O4' U B 59 -12.977 -8.635 16.563 1.00 40.64 O
ATOM 9 C3' U B 59 -10.703 -8.951 16.864 1.00 40.63 C
ATOM 10 O3' U B 59 -9.656 -9.406 17.704 1.00 40.83 O
ATOM 11 C2' U B 59 -11.174 -10.020 15.888 1.00 40.24 C
ATOM 12 O2' U B 59 -11.330 -11.305 16.448 1.00 39.10 O
ATOM 13 C1' U B 59 -12.546 -9.470 15.497 1.00 40.05 C
ATOM 14 N1 U B 59 -12.482 -8.674 14.264 1.00 38.82 N
ATOM 15 C2 U B 59 -12.459 -9.377 13.089 1.00 39.89 C
ATOM 16 O2 U B 59 -12.464 -10.576 13.076 1.00 39.19 O
ATOM 17 N3 U B 59 -12.419 -8.619 11.936 1.00 39.51 N
ATOM 18 C4 U B 59 -12.397 -7.251 11.857 1.00 40.35 C
ATOM 19 O4 U B 59 -12.398 -6.714 10.744 1.00 42.68 O
ATOM 20 C5 U B 59 -12.400 -6.573 13.128 1.00 40.18 C
ATOM 21 C6 U B 59 -12.443 -7.292 14.266 1.00 39.62 C
ATOM 22 P U B 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 23 OP1 U B 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 24 OP2 U B 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 25 O5' U B 60 -7.707 -9.904 16.131 1.00 40.02 O
TER
ATOM 2 P U A 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 3 OP1 U A 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 4 OP2 U A 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 5 O5' U A 60 -7.707 -9.904 16.131 1.00 40.02 O
ATOM 6 C5' U A 60 -8.094 -11.269 16.057 1.00 40.48 C
ATOM 7 C4' U A 60 -7.837 -11.832 14.669 1.00 39.97 C
ATOM 8 O4' U A 60 -8.953 -11.506 13.806 1.00 40.94 O
ATOM 9 C3' U A 60 -6.622 -11.312 13.913 1.00 40.96 C
ATOM 10 O3' U A 60 -5.424 -11.971 14.314 1.00 42.65 O
ATOM 11 C2' U A 60 -6.986 -11.635 12.469 1.00 39.22 C
ATOM 12 O2' U A 60 -6.790 -12.980 12.105 1.00 41.34 O
ATOM 13 C1' U A 60 -8.489 -11.348 12.471 1.00 39.08 C
ATOM 14 N1 U A 60 -8.734 -9.964 12.063 1.00 37.82 N
ATOM 15 C2 U A 60 -8.782 -9.707 10.701 1.00 35.53 C
ATOM 16 O2 U A 60 -8.622 -10.575 9.865 1.00 37.88 O
ATOM 17 N3 U A 60 -8.994 -8.407 10.372 1.00 33.75 N
ATOM 18 C4 U A 60 -9.120 -7.349 11.238 1.00 34.00 C
ATOM 19 O4 U A 60 -9.107 -6.232 10.791 1.00 32.25 O
ATOM 20 C5 U A 60 -9.080 -7.693 12.634 1.00 33.87 C
ATOM 21 C6 U A 60 -8.892 -8.958 12.989 1.00 34.80 C
ATOM 22 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 23 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 24 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 25 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
TER
ATOM 1 O3' A B 58 -13.611 -4.689 17.833 1.00 41.41 O
ATOM 2 P U B 59 -12.007 -4.752 17.705 1.00 43.42 P
ATOM 3 OP1 U B 59 -11.511 -4.398 19.070 1.00 43.85 O
ATOM 4 OP2 U B 59 -11.541 -3.975 16.511 1.00 43.00 O
ATOM 5 O5' U B 59 -11.680 -6.286 17.404 1.00 42.00 O
ATOM 6 C5' U B 59 -12.013 -7.314 18.327 1.00 40.96 C
ATOM 7 C4' U B 59 -11.981 -8.647 17.627 1.00 40.87 C
ATOM 8 O4' U B 59 -12.977 -8.635 16.563 1.00 40.64 O
ATOM 9 C3' U B 59 -10.703 -8.951 16.864 1.00 40.63 C
ATOM 10 O3' U B 59 -9.656 -9.406 17.704 1.00 40.83 O
ATOM 11 C2' U B 59 -11.174 -10.020 15.888 1.00 40.24 C
ATOM 12 O2' U B 59 -11.330 -11.305 16.448 1.00 39.10 O
ATOM 13 C1' U B 59 -12.546 -9.470 15.497 1.00 40.05 C
ATOM 14 N1 U B 59 -12.482 -8.674 14.264 1.00 38.82 N
ATOM 15 C2 U B 59 -12.459 -9.377 13.089 1.00 39.89 C
ATOM 16 O2 U B 59 -12.464 -10.576 13.076 1.00 39.19 O
ATOM 17 N3 U B 59 -12.419 -8.619 11.936 1.00 39.51 N
ATOM 18 C4 U B 59 -12.397 -7.251 11.857 1.00 40.35 C
ATOM 19 O4 U B 59 -12.398 -6.714 10.744 1.00 42.68 O
ATOM 20 C5 U B 59 -12.400 -6.573 13.128 1.00 40.18 C
ATOM 21 C6 U B 59 -12.443 -7.292 14.266 1.00 39.62 C
ATOM 22 P U B 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 23 OP1 U B 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 24 OP2 U B 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 25 O5' U B 60 -7.707 -9.904 16.131 1.00 40.02 O
TER
Atoms:
C4: (-9.120,-7.349,11.238)
N3: (-8.994,-8.407,10.372)
OP1: (-7.377,-9.442,18.597)
OP2: (-8.063,-7.571,16.955)
C2: (-8.782,-9.707,10.701)
C1': (-8.489,-11.348,12.471)
C3': (-6.622,-11.312,13.913)
O5': (-7.707,-9.904,16.131)
O4': (-8.953,-11.506,13.806)
C5': (-8.094,-11.269,16.057)
P: (-8.129,-8.997,17.377)
C4': (-7.837,-11.832,14.669)
C2': (-6.986,-11.635,12.469)
O2': (-6.790,-12.980,12.105)
N1: (-8.734,-9.964,12.063)
O4: (-9.107,-6.232,10.791)
O2: (-8.622,-10.575,9.865)
C6: (-8.892,-8.958,12.989)
C5: (-9.080,-7.693,12.634)
O3': (-5.424,-11.971,14.314)
N3: (-8.994,-8.407,10.372)
OP1: (-7.377,-9.442,18.597)
OP2: (-8.063,-7.571,16.955)
C2: (-8.782,-9.707,10.701)
C1': (-8.489,-11.348,12.471)
C3': (-6.622,-11.312,13.913)
O5': (-7.707,-9.904,16.131)
O4': (-8.953,-11.506,13.806)
C5': (-8.094,-11.269,16.057)
P: (-8.129,-8.997,17.377)
C4': (-7.837,-11.832,14.669)
C2': (-6.986,-11.635,12.469)
O2': (-6.790,-12.980,12.105)
N1: (-8.734,-9.964,12.063)
O4: (-9.107,-6.232,10.791)
O2: (-8.622,-10.575,9.865)
C6: (-8.892,-8.958,12.989)
C5: (-9.080,-7.693,12.634)
O3': (-5.424,-11.971,14.314)
C4: (-12.397,-7.251,11.857)
N3: (-12.419,-8.619,11.936)
OP1: (-11.511,-4.398,19.070)
OP2: (-11.541,-3.975,16.511)
C2: (-12.459,-9.377,13.089)
C1': (-12.546,-9.470,15.497)
C3': (-10.703,-8.951,16.864)
O5': (-11.680,-6.286,17.404)
O4': (-12.977,-8.635,16.563)
C5': (-12.013,-7.314,18.327)
P: (-12.007,-4.752,17.705)
C4': (-11.981,-8.647,17.627)
C2': (-11.174,-10.020,15.888)
O2': (-11.330,-11.305,16.448)
N1: (-12.482,-8.674,14.264)
O4: (-12.398,-6.714,10.744)
O2: (-12.464,-10.576,13.076)
C6: (-12.443,-7.292,14.266)
C5: (-12.400,-6.573,13.128)
O3': (-9.656,-9.406,17.704)
N3: (-12.419,-8.619,11.936)
OP1: (-11.511,-4.398,19.070)
OP2: (-11.541,-3.975,16.511)
C2: (-12.459,-9.377,13.089)
C1': (-12.546,-9.470,15.497)
C3': (-10.703,-8.951,16.864)
O5': (-11.680,-6.286,17.404)
O4': (-12.977,-8.635,16.563)
C5': (-12.013,-7.314,18.327)
P: (-12.007,-4.752,17.705)
C4': (-11.981,-8.647,17.627)
C2': (-11.174,-10.020,15.888)
O2': (-11.330,-11.305,16.448)
N1: (-12.482,-8.674,14.264)
O4: (-12.398,-6.714,10.744)
O2: (-12.464,-10.576,13.076)
C6: (-12.443,-7.292,14.266)
C5: (-12.400,-6.573,13.128)
O3': (-9.656,-9.406,17.704)
Image (generated by PyMOL):