Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21232:21231
Extra
PDB:
ATOM 1 O3' U A1231 -47.939 -43.495 -5.158 1.00111.37 O
ATOM 2 P U A1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 3 OP1 U A1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 4 OP2 U A1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 5 O5' U A1232 -49.165 -43.194 -7.315 1.00119.68 O
ATOM 6 C5' U A1232 -49.134 -44.606 -7.328 1.00119.63 C
ATOM 7 C4' U A1232 -50.482 -45.204 -7.651 1.00119.93 C
ATOM 8 O4' U A1232 -50.980 -45.959 -6.508 1.00119.35 O
ATOM 9 C3' U A1232 -51.628 -44.247 -7.922 1.00120.26 C
ATOM 10 O3' U A1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 11 C2' U A1232 -52.828 -45.191 -7.784 1.00120.31 C
ATOM 12 O2' U A1232 -52.876 -46.131 -8.846 1.00120.87 O
ATOM 13 C1' U A1232 -52.405 -45.953 -6.530 1.00119.54 C
ATOM 14 N1 U A1232 -52.908 -45.299 -5.312 1.00118.98 N
ATOM 15 C2 U A1232 -54.048 -45.863 -4.831 1.00118.89 C
ATOM 16 O2 U A1232 -54.510 -46.839 -5.378 1.00119.22 O
ATOM 17 N3 U A1232 -54.585 -45.279 -3.719 1.00118.41 N
ATOM 18 C4 U A1232 -54.077 -44.179 -3.079 1.00118.03 C
ATOM 19 O4 U A1232 -54.652 -43.751 -2.102 1.00117.64 O
ATOM 20 C5 U A1232 -52.887 -43.620 -3.638 1.00118.16 C
ATOM 21 C6 U A1232 -52.359 -44.184 -4.726 1.00118.63 C
ATOM 22 P U A1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 23 OP1 U A1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 24 OP2 U A1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 25 O5' U A1233 -53.774 -43.822 -10.214 1.00119.23 O
TER
ATOM 1 O3' C B1230 -48.188 -41.237 0.446 1.00111.50 O
ATOM 2 P U B1231 -49.003 -40.740 -0.844 1.00109.33 P
ATOM 3 OP1 U B1231 -48.332 -39.492 -1.307 1.00109.54 O
ATOM 4 OP2 U B1231 -50.438 -40.681 -0.468 1.00109.31 O
ATOM 5 O5' U B1231 -48.774 -41.924 -1.894 1.00109.80 O
ATOM 6 C5' U B1231 -47.475 -42.438 -2.147 1.00109.79 C
ATOM 7 C4' U B1231 -47.525 -43.814 -2.761 1.00110.08 C
ATOM 8 O4' U B1231 -48.006 -44.773 -1.787 1.00109.62 O
ATOM 9 C3' U B1231 -48.469 -43.990 -3.939 1.00110.77 C
ATOM 10 O3' U B1231 -47.939 -43.495 -5.158 1.00111.37 O
ATOM 11 C2' U B1231 -48.719 -45.492 -3.945 1.00110.77 C
ATOM 12 O2' U B1231 -47.642 -46.178 -4.560 1.00110.98 O
ATOM 13 C1' U B1231 -48.707 -45.810 -2.447 1.00110.01 C
ATOM 14 N1 U B1231 -50.078 -45.911 -1.874 1.00109.87 N
ATOM 15 C2 U B1231 -50.810 -47.059 -2.169 1.00110.09 C
ATOM 16 O2 U B1231 -50.374 -47.955 -2.885 1.00110.40 O
ATOM 17 N3 U B1231 -52.069 -47.129 -1.604 1.00109.97 N
ATOM 18 C4 U B1231 -52.657 -46.180 -0.793 1.00109.66 C
ATOM 19 O4 U B1231 -53.794 -46.375 -0.367 1.00109.62 O
ATOM 20 C5 U B1231 -51.843 -45.029 -0.535 1.00109.43 C
ATOM 21 C6 U B1231 -50.618 -44.938 -1.064 1.00109.54 C
ATOM 22 P U B1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 23 OP1 U B1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 24 OP2 U B1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 25 O5' U B1232 -49.165 -43.194 -7.315 1.00119.68 O
TER
ATOM 2 P U A1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 3 OP1 U A1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 4 OP2 U A1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 5 O5' U A1232 -49.165 -43.194 -7.315 1.00119.68 O
ATOM 6 C5' U A1232 -49.134 -44.606 -7.328 1.00119.63 C
ATOM 7 C4' U A1232 -50.482 -45.204 -7.651 1.00119.93 C
ATOM 8 O4' U A1232 -50.980 -45.959 -6.508 1.00119.35 O
ATOM 9 C3' U A1232 -51.628 -44.247 -7.922 1.00120.26 C
ATOM 10 O3' U A1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 11 C2' U A1232 -52.828 -45.191 -7.784 1.00120.31 C
ATOM 12 O2' U A1232 -52.876 -46.131 -8.846 1.00120.87 O
ATOM 13 C1' U A1232 -52.405 -45.953 -6.530 1.00119.54 C
ATOM 14 N1 U A1232 -52.908 -45.299 -5.312 1.00118.98 N
ATOM 15 C2 U A1232 -54.048 -45.863 -4.831 1.00118.89 C
ATOM 16 O2 U A1232 -54.510 -46.839 -5.378 1.00119.22 O
ATOM 17 N3 U A1232 -54.585 -45.279 -3.719 1.00118.41 N
ATOM 18 C4 U A1232 -54.077 -44.179 -3.079 1.00118.03 C
ATOM 19 O4 U A1232 -54.652 -43.751 -2.102 1.00117.64 O
ATOM 20 C5 U A1232 -52.887 -43.620 -3.638 1.00118.16 C
ATOM 21 C6 U A1232 -52.359 -44.184 -4.726 1.00118.63 C
ATOM 22 P U A1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 23 OP1 U A1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 24 OP2 U A1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 25 O5' U A1233 -53.774 -43.822 -10.214 1.00119.23 O
TER
ATOM 1 O3' C B1230 -48.188 -41.237 0.446 1.00111.50 O
ATOM 2 P U B1231 -49.003 -40.740 -0.844 1.00109.33 P
ATOM 3 OP1 U B1231 -48.332 -39.492 -1.307 1.00109.54 O
ATOM 4 OP2 U B1231 -50.438 -40.681 -0.468 1.00109.31 O
ATOM 5 O5' U B1231 -48.774 -41.924 -1.894 1.00109.80 O
ATOM 6 C5' U B1231 -47.475 -42.438 -2.147 1.00109.79 C
ATOM 7 C4' U B1231 -47.525 -43.814 -2.761 1.00110.08 C
ATOM 8 O4' U B1231 -48.006 -44.773 -1.787 1.00109.62 O
ATOM 9 C3' U B1231 -48.469 -43.990 -3.939 1.00110.77 C
ATOM 10 O3' U B1231 -47.939 -43.495 -5.158 1.00111.37 O
ATOM 11 C2' U B1231 -48.719 -45.492 -3.945 1.00110.77 C
ATOM 12 O2' U B1231 -47.642 -46.178 -4.560 1.00110.98 O
ATOM 13 C1' U B1231 -48.707 -45.810 -2.447 1.00110.01 C
ATOM 14 N1 U B1231 -50.078 -45.911 -1.874 1.00109.87 N
ATOM 15 C2 U B1231 -50.810 -47.059 -2.169 1.00110.09 C
ATOM 16 O2 U B1231 -50.374 -47.955 -2.885 1.00110.40 O
ATOM 17 N3 U B1231 -52.069 -47.129 -1.604 1.00109.97 N
ATOM 18 C4 U B1231 -52.657 -46.180 -0.793 1.00109.66 C
ATOM 19 O4 U B1231 -53.794 -46.375 -0.367 1.00109.62 O
ATOM 20 C5 U B1231 -51.843 -45.029 -0.535 1.00109.43 C
ATOM 21 C6 U B1231 -50.618 -44.938 -1.064 1.00109.54 C
ATOM 22 P U B1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 23 OP1 U B1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 24 OP2 U B1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 25 O5' U B1232 -49.165 -43.194 -7.315 1.00119.68 O
TER
Atoms:
C4: (-54.077,-44.179,-3.079)
N3: (-54.585,-45.279,-3.719)
OP1: (-47.803,-41.313,-6.351)
OP2: (-49.978,-42.058,-5.229)
C2: (-54.048,-45.863,-4.831)
C1': (-52.405,-45.953,-6.530)
C3': (-51.628,-44.247,-7.922)
O5': (-49.165,-43.194,-7.315)
O4': (-50.980,-45.959,-6.508)
C5': (-49.134,-44.606,-7.328)
P: (-48.756,-42.397,-6.008)
C4': (-50.482,-45.204,-7.651)
C2': (-52.828,-45.191,-7.784)
O2': (-52.876,-46.131,-8.846)
N1: (-52.908,-45.299,-5.312)
O4: (-54.652,-43.751,-2.102)
O2: (-54.510,-46.839,-5.378)
C6: (-52.359,-44.184,-4.726)
C5: (-52.887,-43.620,-3.638)
O3': (-51.520,-43.485,-9.140)
N3: (-54.585,-45.279,-3.719)
OP1: (-47.803,-41.313,-6.351)
OP2: (-49.978,-42.058,-5.229)
C2: (-54.048,-45.863,-4.831)
C1': (-52.405,-45.953,-6.530)
C3': (-51.628,-44.247,-7.922)
O5': (-49.165,-43.194,-7.315)
O4': (-50.980,-45.959,-6.508)
C5': (-49.134,-44.606,-7.328)
P: (-48.756,-42.397,-6.008)
C4': (-50.482,-45.204,-7.651)
C2': (-52.828,-45.191,-7.784)
O2': (-52.876,-46.131,-8.846)
N1: (-52.908,-45.299,-5.312)
O4: (-54.652,-43.751,-2.102)
O2: (-54.510,-46.839,-5.378)
C6: (-52.359,-44.184,-4.726)
C5: (-52.887,-43.620,-3.638)
O3': (-51.520,-43.485,-9.140)
C4: (-52.657,-46.180,-0.793)
N3: (-52.069,-47.129,-1.604)
OP1: (-48.332,-39.492,-1.307)
OP2: (-50.438,-40.681,-0.468)
C2: (-50.810,-47.059,-2.169)
C1': (-48.707,-45.810,-2.447)
C3': (-48.469,-43.990,-3.939)
O5': (-48.774,-41.924,-1.894)
O4': (-48.006,-44.773,-1.787)
C5': (-47.475,-42.438,-2.147)
P: (-49.003,-40.740,-0.844)
C4': (-47.525,-43.814,-2.761)
C2': (-48.719,-45.492,-3.945)
O2': (-47.642,-46.178,-4.560)
N1: (-50.078,-45.911,-1.874)
O4: (-53.794,-46.375,-0.367)
O2: (-50.374,-47.955,-2.885)
C6: (-50.618,-44.938,-1.064)
C5: (-51.843,-45.029,-0.535)
O3': (-47.939,-43.495,-5.158)
N3: (-52.069,-47.129,-1.604)
OP1: (-48.332,-39.492,-1.307)
OP2: (-50.438,-40.681,-0.468)
C2: (-50.810,-47.059,-2.169)
C1': (-48.707,-45.810,-2.447)
C3': (-48.469,-43.990,-3.939)
O5': (-48.774,-41.924,-1.894)
O4': (-48.006,-44.773,-1.787)
C5': (-47.475,-42.438,-2.147)
P: (-49.003,-40.740,-0.844)
C4': (-47.525,-43.814,-2.761)
C2': (-48.719,-45.492,-3.945)
O2': (-47.642,-46.178,-4.560)
N1: (-50.078,-45.911,-1.874)
O4: (-53.794,-46.375,-0.367)
O2: (-50.374,-47.955,-2.885)
C6: (-50.618,-44.938,-1.064)
C5: (-51.843,-45.029,-0.535)
O3': (-47.939,-43.495,-5.158)
Image (generated by PyMOL):