ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GX2:A11:A42

Extra

PDB:
ATOM 1 O3' G A 10 39.129 60.341 19.543 1.00 94.92 O
ATOM 2 P A A 11 39.595 60.278 18.013 1.00 78.58 P
ATOM 3 OP1 A A 11 38.448 60.486 17.101 1.00 80.34 O
ATOM 4 OP2 A A 11 40.438 59.065 17.885 1.00 61.29 O
ATOM 5 O5' A A 11 40.518 61.570 17.827 1.00 73.13 O
ATOM 6 C5' A A 11 40.138 62.815 18.391 1.00 67.86 C
ATOM 7 C4' A A 11 41.332 63.514 18.988 1.00 65.98 C
ATOM 8 O4' A A 11 41.778 62.787 20.160 1.00 66.71 O
ATOM 9 C3' A A 11 42.566 63.585 18.102 1.00 69.42 C
ATOM 10 O3' A A 11 42.509 64.643 17.158 1.00 73.48 O
ATOM 11 C2' A A 11 43.698 63.723 19.116 1.00 72.39 C
ATOM 12 O2' A A 11 43.824 65.066 19.558 1.00 84.54 O
ATOM 13 C1' A A 11 43.181 62.887 20.287 1.00 70.39 C
ATOM 14 N9 A A 11 43.771 61.533 20.345 1.00 70.37 N
ATOM 15 C8 A A 11 43.612 60.506 19.456 1.00 65.21 C
ATOM 16 N7 A A 11 44.268 59.415 19.780 1.00 68.50 N
ATOM 17 C5 A A 11 44.903 59.744 20.967 1.00 69.52 C
ATOM 18 C6 A A 11 45.756 59.020 21.827 1.00 70.69 C
ATOM 19 N6 A A 11 46.130 57.756 21.608 1.00 70.72 N
ATOM 20 N1 A A 11 46.215 59.649 22.928 1.00 77.91 N
ATOM 21 C2 A A 11 45.841 60.913 23.151 1.00 78.64 C
ATOM 22 N3 A A 11 45.047 61.693 22.418 1.00 80.14 N
ATOM 23 C4 A A 11 44.606 61.044 21.328 1.00 75.53 C
ATOM 24 P G A 12 42.447 64.323 15.583 1.00 95.71 P
ATOM 25 OP1 G A 12 41.138 63.703 15.273 1.00 86.71 O
ATOM 26 OP2 G A 12 43.710 63.645 15.210 1.00 93.08 O
ATOM 27 O5' G A 12 42.387 65.760 14.874 1.00114.52 O
TER

ATOM 1 O3' G B 41 43.272 73.683 21.255 1.00 83.33 O
ATOM 2 P G B 42 42.725 73.192 22.676 1.00 84.28 P
ATOM 3 OP1 G B 42 41.371 73.755 22.883 1.00 75.95 O
ATOM 4 OP2 G B 42 43.788 73.397 23.686 1.00 76.57 O
ATOM 5 O5' G B 42 42.619 71.601 22.526 1.00 79.46 O
ATOM 6 C5' G B 42 41.616 71.027 21.700 1.00 72.07 C
ATOM 7 C4' G B 42 41.919 69.586 21.371 1.00 68.79 C
ATOM 8 O4' G B 42 43.305 69.464 20.958 1.00 68.05 O
ATOM 9 C3' G B 42 41.780 68.585 22.510 1.00 62.96 C
ATOM 10 O3' G B 42 40.441 68.166 22.730 1.00 56.46 O
ATOM 11 C2' G B 42 42.694 67.451 22.065 1.00 67.66 C
ATOM 12 O2' G B 42 42.036 66.623 21.117 1.00 57.93 O
ATOM 13 C1' G B 42 43.815 68.207 21.352 1.00 70.98 C
ATOM 14 N9 G B 42 44.998 68.406 22.214 1.00 68.39 N
ATOM 15 C8 G B 42 45.554 69.601 22.601 1.00 68.93 C
ATOM 16 N7 G B 42 46.603 69.463 23.366 1.00 66.96 N
ATOM 17 C5 G B 42 46.756 68.088 23.495 1.00 61.73 C
ATOM 18 C6 G B 42 47.723 67.339 24.209 1.00 53.12 C
ATOM 19 O6 G B 42 48.672 67.755 24.889 1.00 44.68 O
ATOM 20 N1 G B 42 47.516 65.969 24.077 1.00 54.33 N
ATOM 21 C2 G B 42 46.504 65.395 23.345 1.00 57.55 C
ATOM 22 N2 G B 42 46.467 64.055 23.337 1.00 49.86 N
ATOM 23 N3 G B 42 45.591 66.085 22.669 1.00 59.57 N
ATOM 24 C4 G B 42 45.776 67.423 22.790 1.00 63.23 C
ATOM 25 P C B 43 39.921 67.753 24.192 1.00 91.37 P
ATOM 26 OP1 C B 43 38.567 67.708 23.585 1.00 91.20 O
ATOM 27 OP2 C B 43 40.733 68.919 24.626 1.00 95.75 O
ATOM 28 O5' C B 43 40.650 66.351 23.908 1.00 54.60 O
TER

Atoms:
OP1: (38.448,60.486,17.101)
OP2: (40.438,59.065,17.885)
C3': (42.566,63.585,18.102)
C1': (43.181,62.887,20.287)
C5': (40.138,62.815,18.391)
O4': (41.778,62.787,20.160)
C8: (43.612,60.506,19.456)
O2': (43.824,65.066,19.558)
C6: (45.756,59.020,21.827)
C5: (44.903,59.744,20.967)
C4: (44.606,61.044,21.328)
P: (39.595,60.278,18.013)
C4': (41.332,63.514,18.988)
C2': (43.698,63.723,19.116)
C2: (45.841,60.913,23.151)
N1: (46.215,59.649,22.928)
N3: (45.047,61.693,22.418)
N6: (46.130,57.756,21.608)
N7: (44.268,59.415,19.780)
N9: (43.771,61.533,20.345)
O5': (40.518,61.570,17.827)
O3': (42.509,64.643,17.158)
OP1: (41.371,73.755,22.883)
OP2: (43.788,73.397,23.686)
C3': (41.780,68.585,22.510)
C1': (43.815,68.207,21.352)
C5': (41.616,71.027,21.700)
O6: (48.672,67.755,24.889)
O4': (43.305,69.464,20.958)
C8: (45.554,69.601,22.601)
C2: (46.504,65.395,23.345)
C6: (47.723,67.339,24.209)
C5: (46.756,68.088,23.495)
C4: (45.776,67.423,22.790)
P: (42.725,73.192,22.676)
C4': (41.919,69.586,21.371)
C2': (42.694,67.451,22.065)
O2': (42.036,66.623,21.117)
N1: (47.516,65.969,24.077)
N2: (46.467,64.055,23.337)
N3: (45.591,66.085,22.669)
N7: (46.603,69.463,23.366)
N9: (44.998,68.406,22.214)
O5': (42.619,71.601,22.526)
O3': (40.441,68.166,22.730)
Image (generated by PyMOL):
PyMOL image
show in jmol