ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXB:B31:B78

Extra

PDB:
ATOM 1 O3' G A 30 -5.425 -33.174 22.778 1.00 95.56 O
ATOM 2 P A A 31 -5.276 -33.004 21.206 1.00 95.70 P
ATOM 3 OP1 A A 31 -4.922 -34.339 20.670 1.00 95.09 O
ATOM 4 OP2 A A 31 -4.420 -31.826 20.929 1.00 96.40 O
ATOM 5 O5' A A 31 -6.756 -32.636 20.745 1.00 95.72 O
ATOM 6 C5' A A 31 -7.260 -31.328 20.937 1.00 96.06 C
ATOM 7 C4' A A 31 -8.721 -31.399 21.338 1.00 96.06 C
ATOM 8 O4' A A 31 -9.369 -32.529 20.698 1.00 95.11 O
ATOM 9 C3' A A 31 -8.952 -31.572 22.835 1.00 96.18 C
ATOM 10 O3' A A 31 -10.075 -30.809 23.231 1.00 98.07 O
ATOM 11 C2' A A 31 -9.232 -33.062 22.974 1.00 94.66 C
ATOM 12 O2' A A 31 -10.038 -33.371 24.095 1.00 94.40 O
ATOM 13 C1' A A 31 -9.984 -33.338 21.678 1.00 94.19 C
ATOM 14 N9 A A 31 -9.907 -34.737 21.276 1.00 92.34 N
ATOM 15 C8 A A 31 -8.818 -35.396 20.780 1.00 91.51 C
ATOM 16 N7 A A 31 -9.040 -36.659 20.514 1.00 90.42 N
ATOM 17 C5 A A 31 -10.364 -36.838 20.860 1.00 90.00 C
ATOM 18 C6 A A 31 -11.207 -37.960 20.814 1.00 89.10 C
ATOM 19 N6 A A 31 -10.809 -39.153 20.378 1.00 88.12 N
ATOM 20 N1 A A 31 -12.478 -37.805 21.232 1.00 89.59 N
ATOM 21 C2 A A 31 -12.880 -36.604 21.669 1.00 90.31 C
ATOM 22 N3 A A 31 -12.179 -35.477 21.757 1.00 90.94 N
ATOM 23 C4 A A 31 -10.917 -35.665 21.333 1.00 91.16 C
ATOM 24 P A A 32 -9.929 -29.255 23.566 1.00100.07 P
ATOM 25 OP1 A A 32 -9.337 -28.564 22.394 1.00100.42 O
ATOM 26 OP2 A A 32 -9.299 -29.141 24.905 1.00 99.64 O
ATOM 27 O5' A A 32 -11.458 -28.812 23.682 1.00101.12 O
TER

ATOM 1 O3' G B 77 -18.875 -30.198 26.390 1.00 92.00 O
ATOM 2 P G B 78 -19.352 -30.399 24.875 1.00 91.28 P
ATOM 3 OP1 G B 78 -19.424 -29.054 24.257 1.00 92.09 O
ATOM 4 OP2 G B 78 -20.534 -31.293 24.849 1.00 90.91 O
ATOM 5 O5' G B 78 -18.151 -31.230 24.230 1.00 89.44 O
ATOM 6 C5' G B 78 -16.845 -30.681 24.172 1.00 87.11 C
ATOM 7 C4' G B 78 -15.815 -31.771 23.972 1.00 84.50 C
ATOM 8 O4' G B 78 -15.926 -32.768 25.016 1.00 83.47 O
ATOM 9 C3' G B 78 -15.981 -32.581 22.704 1.00 83.36 C
ATOM 10 O3' G B 78 -15.521 -31.838 21.581 1.00 83.23 O
ATOM 11 C2' G B 78 -15.121 -33.791 23.056 1.00 82.44 C
ATOM 12 O2' G B 78 -13.734 -33.535 22.985 1.00 82.54 O
ATOM 13 C1' G B 78 -15.518 -34.024 24.511 1.00 82.27 C
ATOM 14 N9 G B 78 -16.614 -34.979 24.674 1.00 82.12 N
ATOM 15 C8 G B 78 -17.944 -34.684 24.865 1.00 82.98 C
ATOM 16 N7 G B 78 -18.704 -35.738 24.975 1.00 83.06 N
ATOM 17 C5 G B 78 -17.824 -36.805 24.847 1.00 82.13 C
ATOM 18 C6 G B 78 -18.070 -38.203 24.881 1.00 81.85 C
ATOM 19 O6 G B 78 -19.155 -38.780 25.037 1.00 83.02 O
ATOM 20 N1 G B 78 -16.907 -38.952 24.713 1.00 80.41 N
ATOM 21 C2 G B 78 -15.658 -38.403 24.532 1.00 80.14 C
ATOM 22 N2 G B 78 -14.641 -39.266 24.385 1.00 79.91 N
ATOM 23 N3 G B 78 -15.414 -37.097 24.498 1.00 80.21 N
ATOM 24 C4 G B 78 -16.535 -36.355 24.662 1.00 81.30 C
ATOM 25 P A B 79 -16.573 -31.352 20.472 1.00 83.66 P
ATOM 26 OP1 A B 79 -17.319 -30.179 20.984 1.00 84.53 O
ATOM 27 OP2 A B 79 -17.311 -32.558 20.032 1.00 83.40 O
ATOM 28 O5' A B 79 -15.656 -30.886 19.249 1.00 82.97 O
TER

Atoms:
OP1: (-4.922,-34.339,20.670)
OP2: (-4.420,-31.826,20.929)
C3': (-8.952,-31.572,22.835)
C1': (-9.984,-33.338,21.678)
C5': (-7.260,-31.328,20.937)
O4': (-9.369,-32.529,20.698)
C8: (-8.818,-35.396,20.780)
O2': (-10.038,-33.371,24.095)
C6: (-11.207,-37.960,20.814)
C5: (-10.364,-36.838,20.860)
C4: (-10.917,-35.665,21.333)
P: (-5.276,-33.004,21.206)
C4': (-8.721,-31.399,21.338)
C2': (-9.232,-33.062,22.974)
C2: (-12.880,-36.604,21.669)
N1: (-12.478,-37.805,21.232)
N3: (-12.179,-35.477,21.757)
N6: (-10.809,-39.153,20.378)
N7: (-9.040,-36.659,20.514)
N9: (-9.907,-34.737,21.276)
O5': (-6.756,-32.636,20.745)
O3': (-10.075,-30.809,23.231)
OP1: (-19.424,-29.054,24.257)
OP2: (-20.534,-31.293,24.849)
C3': (-15.981,-32.581,22.704)
C1': (-15.518,-34.024,24.511)
C5': (-16.845,-30.681,24.172)
O6: (-19.155,-38.780,25.037)
O4': (-15.926,-32.768,25.016)
C8: (-17.944,-34.684,24.865)
C2: (-15.658,-38.403,24.532)
C6: (-18.070,-38.203,24.881)
C5: (-17.824,-36.805,24.847)
C4: (-16.535,-36.355,24.662)
P: (-19.352,-30.399,24.875)
C4': (-15.815,-31.771,23.972)
C2': (-15.121,-33.791,23.056)
O2': (-13.734,-33.535,22.985)
N1: (-16.907,-38.952,24.713)
N2: (-14.641,-39.266,24.385)
N3: (-15.414,-37.097,24.498)
N7: (-18.704,-35.738,24.975)
N9: (-16.614,-34.979,24.674)
O5': (-18.151,-31.230,24.230)
O3': (-15.521,-31.838,21.581)
Image (generated by PyMOL):
PyMOL image
show in jmol