Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A615:A2374
Extra
PDB:
ATOM 1 O3' U A 614 45.908 102.215 93.327 1.00 28.56 O
ATOM 2 P G A 615 45.281 103.572 92.770 1.00 30.34 P
ATOM 3 OP1 G A 615 43.980 103.228 92.190 1.00 31.30 O
ATOM 4 OP2 G A 615 46.288 104.268 91.938 1.00 31.80 O
ATOM 5 O5' G A 615 45.011 104.424 94.080 1.00 29.24 O
ATOM 6 C5' G A 615 44.016 104.037 95.023 1.00 27.03 C
ATOM 7 C4' G A 615 44.338 104.650 96.342 1.00 27.76 C
ATOM 8 O4' G A 615 45.646 104.205 96.761 1.00 28.38 O
ATOM 9 C3' G A 615 44.469 106.152 96.251 1.00 26.96 C
ATOM 10 O3' G A 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 11 C2' G A 615 45.373 106.468 97.424 1.00 26.82 C
ATOM 12 O2' G A 615 44.678 106.528 98.633 1.00 25.39 O
ATOM 13 C1' G A 615 46.306 105.261 97.420 1.00 28.64 C
ATOM 14 N9 G A 615 47.556 105.556 96.732 1.00 31.04 N
ATOM 15 C8 G A 615 47.818 105.552 95.383 1.00 31.09 C
ATOM 16 N7 G A 615 49.042 105.895 95.102 1.00 30.94 N
ATOM 17 C5 G A 615 49.612 106.132 96.337 1.00 30.66 C
ATOM 18 C6 G A 615 50.902 106.521 96.673 1.00 30.59 C
ATOM 19 O6 G A 615 51.854 106.732 95.928 1.00 31.13 O
ATOM 20 N1 G A 615 51.052 106.652 98.047 1.00 30.64 N
ATOM 21 C2 G A 615 50.074 106.426 98.975 1.00 30.72 C
ATOM 22 N2 G A 615 50.405 106.617 100.271 1.00 31.50 N
ATOM 23 N3 G A 615 48.864 106.047 98.666 1.00 29.70 N
ATOM 24 C4 G A 615 48.703 105.923 97.345 1.00 29.68 C
ATOM 25 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 26 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 27 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 28 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
TER
ATOM 1 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 2 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 3 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 4 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 5 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
ATOM 6 C5' C B2374 55.739 103.932 100.879 1.00 31.43 C
ATOM 7 C4' C B2374 54.601 104.908 101.147 1.00 32.75 C
ATOM 8 O4' C B2374 54.516 105.070 102.589 1.00 34.62 O
ATOM 9 C3' C B2374 54.822 106.318 100.599 1.00 34.29 C
ATOM 10 O3' C B2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 11 C2' C B2374 54.287 107.214 101.696 1.00 35.28 C
ATOM 12 O2' C B2374 52.881 107.347 101.643 1.00 36.34 O
ATOM 13 C1' C B2374 54.713 106.428 102.929 1.00 35.70 C
ATOM 14 N1 C B2374 56.146 106.646 103.252 1.00 35.09 N
ATOM 15 C2 C B2374 56.499 107.815 103.914 1.00 35.63 C
ATOM 16 O2 C B2374 55.622 108.670 104.139 1.00 36.81 O
ATOM 17 N3 C B2374 57.789 107.999 104.282 1.00 35.70 N
ATOM 18 C4 C B2374 58.711 107.081 103.979 1.00 34.47 C
ATOM 19 N4 C B2374 59.973 107.293 104.376 1.00 35.83 N
ATOM 20 C5 C B2374 58.387 105.905 103.263 1.00 32.64 C
ATOM 21 C6 C B2374 57.110 105.726 102.926 1.00 33.60 C
ATOM 22 P C B2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 23 OP1 C B2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 24 OP2 C B2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 25 O5' C B2375 54.452 109.094 99.318 1.00 36.20 O
TER
ATOM 2 P G A 615 45.281 103.572 92.770 1.00 30.34 P
ATOM 3 OP1 G A 615 43.980 103.228 92.190 1.00 31.30 O
ATOM 4 OP2 G A 615 46.288 104.268 91.938 1.00 31.80 O
ATOM 5 O5' G A 615 45.011 104.424 94.080 1.00 29.24 O
ATOM 6 C5' G A 615 44.016 104.037 95.023 1.00 27.03 C
ATOM 7 C4' G A 615 44.338 104.650 96.342 1.00 27.76 C
ATOM 8 O4' G A 615 45.646 104.205 96.761 1.00 28.38 O
ATOM 9 C3' G A 615 44.469 106.152 96.251 1.00 26.96 C
ATOM 10 O3' G A 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 11 C2' G A 615 45.373 106.468 97.424 1.00 26.82 C
ATOM 12 O2' G A 615 44.678 106.528 98.633 1.00 25.39 O
ATOM 13 C1' G A 615 46.306 105.261 97.420 1.00 28.64 C
ATOM 14 N9 G A 615 47.556 105.556 96.732 1.00 31.04 N
ATOM 15 C8 G A 615 47.818 105.552 95.383 1.00 31.09 C
ATOM 16 N7 G A 615 49.042 105.895 95.102 1.00 30.94 N
ATOM 17 C5 G A 615 49.612 106.132 96.337 1.00 30.66 C
ATOM 18 C6 G A 615 50.902 106.521 96.673 1.00 30.59 C
ATOM 19 O6 G A 615 51.854 106.732 95.928 1.00 31.13 O
ATOM 20 N1 G A 615 51.052 106.652 98.047 1.00 30.64 N
ATOM 21 C2 G A 615 50.074 106.426 98.975 1.00 30.72 C
ATOM 22 N2 G A 615 50.405 106.617 100.271 1.00 31.50 N
ATOM 23 N3 G A 615 48.864 106.047 98.666 1.00 29.70 N
ATOM 24 C4 G A 615 48.703 105.923 97.345 1.00 29.68 C
ATOM 25 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 26 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 27 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 28 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
TER
ATOM 1 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 2 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 3 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 4 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 5 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
ATOM 6 C5' C B2374 55.739 103.932 100.879 1.00 31.43 C
ATOM 7 C4' C B2374 54.601 104.908 101.147 1.00 32.75 C
ATOM 8 O4' C B2374 54.516 105.070 102.589 1.00 34.62 O
ATOM 9 C3' C B2374 54.822 106.318 100.599 1.00 34.29 C
ATOM 10 O3' C B2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 11 C2' C B2374 54.287 107.214 101.696 1.00 35.28 C
ATOM 12 O2' C B2374 52.881 107.347 101.643 1.00 36.34 O
ATOM 13 C1' C B2374 54.713 106.428 102.929 1.00 35.70 C
ATOM 14 N1 C B2374 56.146 106.646 103.252 1.00 35.09 N
ATOM 15 C2 C B2374 56.499 107.815 103.914 1.00 35.63 C
ATOM 16 O2 C B2374 55.622 108.670 104.139 1.00 36.81 O
ATOM 17 N3 C B2374 57.789 107.999 104.282 1.00 35.70 N
ATOM 18 C4 C B2374 58.711 107.081 103.979 1.00 34.47 C
ATOM 19 N4 C B2374 59.973 107.293 104.376 1.00 35.83 N
ATOM 20 C5 C B2374 58.387 105.905 103.263 1.00 32.64 C
ATOM 21 C6 C B2374 57.110 105.726 102.926 1.00 33.60 C
ATOM 22 P C B2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 23 OP1 C B2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 24 OP2 C B2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 25 O5' C B2375 54.452 109.094 99.318 1.00 36.20 O
TER
Atoms:
OP1: (43.980,103.228,92.190)
OP2: (46.288,104.268,91.938)
C3': (44.469,106.152,96.251)
C1': (46.306,105.261,97.420)
C5': (44.016,104.037,95.023)
O6: (51.854,106.732,95.928)
O4': (45.646,104.205,96.761)
C8: (47.818,105.552,95.383)
C2: (50.074,106.426,98.975)
C6: (50.902,106.521,96.673)
C5: (49.612,106.132,96.337)
C4: (48.703,105.923,97.345)
P: (45.281,103.572,92.770)
C4': (44.338,104.650,96.342)
C2': (45.373,106.468,97.424)
O2': (44.678,106.528,98.633)
N1: (51.052,106.652,98.047)
N2: (50.405,106.617,100.271)
N3: (48.864,106.047,98.666)
N7: (49.042,105.895,95.102)
N9: (47.556,105.556,96.732)
O5': (45.011,104.424,94.080)
O3': (43.187,106.742,96.370)
OP2: (46.288,104.268,91.938)
C3': (44.469,106.152,96.251)
C1': (46.306,105.261,97.420)
C5': (44.016,104.037,95.023)
O6: (51.854,106.732,95.928)
O4': (45.646,104.205,96.761)
C8: (47.818,105.552,95.383)
C2: (50.074,106.426,98.975)
C6: (50.902,106.521,96.673)
C5: (49.612,106.132,96.337)
C4: (48.703,105.923,97.345)
P: (45.281,103.572,92.770)
C4': (44.338,104.650,96.342)
C2': (45.373,106.468,97.424)
O2': (44.678,106.528,98.633)
N1: (51.052,106.652,98.047)
N2: (50.405,106.617,100.271)
N3: (48.864,106.047,98.666)
N7: (49.042,105.895,95.102)
N9: (47.556,105.556,96.732)
O5': (45.011,104.424,94.080)
O3': (43.187,106.742,96.370)
C2: (56.499,107.815,103.914)
OP1: (57.629,102.778,98.000)
OP2: (57.428,105.308,98.159)
C4: (58.711,107.081,103.979)
O5': (55.964,103.782,99.471)
C3': (54.822,106.318,100.599)
C1': (54.713,106.428,102.929)
O4': (54.516,105.070,102.589)
C5': (55.739,103.932,100.879)
P: (57.400,103.983,98.809)
O2: (55.622,108.670,104.139)
C4': (54.601,104.908,101.147)
C2': (54.287,107.214,101.696)
O2': (52.881,107.347,101.643)
N1: (56.146,106.646,103.252)
N3: (57.789,107.999,104.282)
N4: (59.973,107.293,104.376)
C6: (57.110,105.726,102.926)
C5: (58.387,105.905,103.263)
O3': (54.161,106.585,99.376)
OP1: (57.629,102.778,98.000)
OP2: (57.428,105.308,98.159)
C4: (58.711,107.081,103.979)
O5': (55.964,103.782,99.471)
C3': (54.822,106.318,100.599)
C1': (54.713,106.428,102.929)
O4': (54.516,105.070,102.589)
C5': (55.739,103.932,100.879)
P: (57.400,103.983,98.809)
O2: (55.622,108.670,104.139)
C4': (54.601,104.908,101.147)
C2': (54.287,107.214,101.696)
O2': (52.881,107.347,101.643)
N1: (56.146,106.646,103.252)
N3: (57.789,107.999,104.282)
N4: (59.973,107.293,104.376)
C6: (57.110,105.726,102.926)
C5: (58.387,105.905,103.263)
O3': (54.161,106.585,99.376)
Image (generated by PyMOL):