ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A298:A318

Extra

PDB:
ATOM 1 O3' G A 297 -8.017 192.133 214.389 1.00 22.30 O
ATOM 2 P A A 298 -7.875 190.922 215.420 1.00 24.56 P
ATOM 3 OP1 A A 298 -6.417 190.648 215.562 1.00 24.56 O
ATOM 4 OP2 A A 298 -8.748 189.853 214.917 1.00 24.56 O
ATOM 5 O5' A A 298 -8.471 191.491 216.791 1.00 24.56 O
ATOM 6 C5' A A 298 -8.326 192.850 217.170 1.00 24.56 C
ATOM 7 C4' A A 298 -9.619 193.394 217.722 1.00 24.56 C
ATOM 8 O4' A A 298 -10.591 193.503 216.653 1.00 24.56 O
ATOM 9 C3' A A 298 -10.285 192.535 218.791 1.00 24.56 C
ATOM 10 O3' A A 298 -9.865 192.875 220.099 1.00 24.56 O
ATOM 11 C2' A A 298 -11.779 192.743 218.570 1.00 24.56 C
ATOM 12 O2' A A 298 -12.258 193.845 219.331 1.00 24.56 O
ATOM 13 C1' A A 298 -11.860 193.082 217.083 1.00 24.56 C
ATOM 14 N9 A A 298 -12.262 191.930 216.254 1.00 24.70 N
ATOM 15 C8 A A 298 -11.457 190.932 215.759 1.00 24.70 C
ATOM 16 N7 A A 298 -12.087 190.060 214.995 1.00 24.70 N
ATOM 17 C5 A A 298 -13.391 190.523 214.974 1.00 24.70 C
ATOM 18 C6 A A 298 -14.553 190.048 214.355 1.00 24.70 C
ATOM 19 N6 A A 298 -14.624 188.946 213.596 1.00 24.70 N
ATOM 20 N1 A A 298 -15.679 190.759 214.551 1.00 24.70 N
ATOM 21 C2 A A 298 -15.651 191.846 215.312 1.00 24.70 C
ATOM 22 N3 A A 298 -14.624 192.380 215.942 1.00 24.70 N
ATOM 23 C4 A A 298 -13.509 191.674 215.731 1.00 24.70 C
ATOM 24 P A A 299 -8.766 191.978 220.849 1.00 23.68 P
ATOM 25 OP1 A A 299 -8.010 192.882 221.774 1.00 23.68 O
ATOM 26 OP2 A A 299 -8.020 191.246 219.797 1.00 23.68 O
ATOM 27 O5' A A 299 -9.655 190.967 221.702 1.00 23.68 O
TER

ATOM 1 O3' C B 317 -16.774 194.856 225.480 1.00 31.02 O
ATOM 2 P G B 318 -17.226 195.410 224.045 1.00 32.60 P
ATOM 3 OP1 G B 318 -16.566 196.740 223.863 1.00 32.60 O
ATOM 4 OP2 G B 318 -18.706 195.340 223.997 1.00 32.60 O
ATOM 5 O5' G B 318 -16.601 194.338 223.032 1.00 32.60 O
ATOM 6 C5' G B 318 -15.262 194.463 222.575 1.00 32.60 C
ATOM 7 C4' G B 318 -15.145 194.228 221.089 1.00 32.60 C
ATOM 8 O4' G B 318 -15.380 192.833 220.793 1.00 32.60 O
ATOM 9 C3' G B 318 -16.138 194.958 220.187 1.00 32.60 C
ATOM 10 O3' G B 318 -15.804 196.329 219.977 1.00 32.60 O
ATOM 11 C2' G B 318 -16.070 194.108 218.939 1.00 32.60 C
ATOM 12 O2' G B 318 -14.840 194.327 218.268 1.00 32.60 O
ATOM 13 C1' G B 318 -16.035 192.719 219.550 1.00 32.60 C
ATOM 14 N9 G B 318 -17.385 192.199 219.795 1.00 32.71 N
ATOM 15 C8 G B 318 -18.129 192.372 220.934 1.00 32.71 C
ATOM 16 N7 G B 318 -19.298 191.791 220.884 1.00 32.71 N
ATOM 17 C5 G B 318 -19.321 191.193 219.640 1.00 32.71 C
ATOM 18 C6 G B 318 -20.335 190.417 219.043 1.00 32.71 C
ATOM 19 O6 G B 318 -21.435 190.090 219.494 1.00 32.71 O
ATOM 20 N1 G B 318 -19.941 190.014 217.788 1.00 32.71 N
ATOM 21 C2 G B 318 -18.729 190.324 217.214 1.00 32.71 C
ATOM 22 N2 G B 318 -18.540 189.839 215.985 1.00 32.71 N
ATOM 23 N3 G B 318 -17.764 191.046 217.752 1.00 32.71 N
ATOM 24 C4 G B 318 -18.142 191.438 218.963 1.00 32.71 C
ATOM 25 P A B 319 -16.170 197.092 218.600 1.00 32.47 P
ATOM 26 OP1 A B 319 -14.965 197.839 218.198 1.00 32.47 O
ATOM 27 OP2 A B 319 -17.432 197.847 218.822 1.00 32.47 O
ATOM 28 O5' A B 319 -16.438 195.900 217.583 1.00 32.47 O
TER

Atoms:
OP1: (-6.417,190.648,215.562)
OP2: (-8.748,189.853,214.917)
C3': (-10.285,192.535,218.791)
C1': (-11.860,193.082,217.083)
C5': (-8.326,192.850,217.170)
O4': (-10.591,193.503,216.653)
C8: (-11.457,190.932,215.759)
O2': (-12.258,193.845,219.331)
C6: (-14.553,190.048,214.355)
C5: (-13.391,190.523,214.974)
C4: (-13.509,191.674,215.731)
P: (-7.875,190.922,215.420)
C4': (-9.619,193.394,217.722)
C2': (-11.779,192.743,218.570)
C2: (-15.651,191.846,215.312)
N1: (-15.679,190.759,214.551)
N3: (-14.624,192.380,215.942)
N6: (-14.624,188.946,213.596)
N7: (-12.087,190.060,214.995)
N9: (-12.262,191.930,216.254)
O5': (-8.471,191.491,216.791)
O3': (-9.865,192.875,220.099)
OP1: (-16.566,196.740,223.863)
OP2: (-18.706,195.340,223.997)
C3': (-16.138,194.958,220.187)
C1': (-16.035,192.719,219.550)
C5': (-15.262,194.463,222.575)
O6: (-21.435,190.090,219.494)
O4': (-15.380,192.833,220.793)
C8: (-18.129,192.372,220.934)
C2: (-18.729,190.324,217.214)
C6: (-20.335,190.417,219.043)
C5: (-19.321,191.193,219.640)
C4: (-18.142,191.438,218.963)
P: (-17.226,195.410,224.045)
C4': (-15.145,194.228,221.089)
C2': (-16.070,194.108,218.939)
O2': (-14.840,194.327,218.268)
N1: (-19.941,190.014,217.788)
N2: (-18.540,189.839,215.985)
N3: (-17.764,191.046,217.752)
N7: (-19.298,191.791,220.884)
N9: (-17.385,192.199,219.795)
O5': (-16.601,194.338,223.032)
O3': (-15.804,196.329,219.977)
Image (generated by PyMOL):
PyMOL image
show in jmol