Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02331:02018
Extra
PDB:
ATOM 1 O3' G A2330 57.098 114.213 111.019 1.00 29.00 O
ATOM 2 P A A2331 57.184 113.043 112.116 1.00 30.51 P
ATOM 3 OP1 A A2331 56.308 113.473 113.242 1.00 29.62 O
ATOM 4 OP2 A A2331 58.605 112.708 112.372 1.00 30.35 O
ATOM 5 O5' A A2331 56.554 111.769 111.394 1.00 31.52 O
ATOM 6 C5' A A2331 55.211 111.790 110.879 1.00 29.44 C
ATOM 7 C4' A A2331 54.952 110.550 110.056 1.00 30.34 C
ATOM 8 O4' A A2331 55.734 110.579 108.832 1.00 28.83 O
ATOM 9 C3' A A2331 55.349 109.247 110.730 1.00 29.91 C
ATOM 10 O3' A A2331 54.327 108.820 111.621 1.00 30.68 O
ATOM 11 C2' A A2331 55.531 108.310 109.541 1.00 31.04 C
ATOM 12 O2' A A2331 54.315 107.790 109.042 1.00 34.15 O
ATOM 13 C1' A A2331 56.143 109.257 108.501 1.00 31.07 C
ATOM 14 N9 A A2331 57.607 109.204 108.495 1.00 30.81 N
ATOM 15 C8 A A2331 58.494 110.124 108.997 1.00 30.46 C
ATOM 16 N7 A A2331 59.750 109.773 108.864 1.00 30.62 N
ATOM 17 C5 A A2331 59.688 108.543 108.226 1.00 28.67 C
ATOM 18 C6 A A2331 60.683 107.651 107.798 1.00 31.07 C
ATOM 19 N6 A A2331 61.991 107.865 107.972 1.00 31.02 N
ATOM 20 N1 A A2331 60.287 106.516 107.178 1.00 30.25 N
ATOM 21 C2 A A2331 58.978 106.301 107.013 1.00 29.20 C
ATOM 22 N3 A A2331 57.947 107.062 107.376 1.00 29.79 N
ATOM 23 C4 A A2331 58.376 108.183 107.984 1.00 29.47 C
ATOM 24 P G A2332 54.714 108.127 113.021 1.00 29.83 P
ATOM 25 OP1 G A2332 53.493 108.200 113.857 1.00 29.66 O
ATOM 26 OP2 G A2332 55.979 108.706 113.526 1.00 30.71 O
ATOM 27 O5' G A2332 55.005 106.608 112.644 1.00 28.79 O
TER
ATOM 1 O3' C B2017 48.828 110.315 103.311 1.00 37.45 O
ATOM 2 P G B2018 48.019 110.909 104.570 1.00 39.72 P
ATOM 3 OP1 G B2018 47.250 109.813 105.216 1.00 41.22 O
ATOM 4 OP2 G B2018 47.318 112.146 104.143 1.00 40.42 O
ATOM 5 O5' G B2018 49.189 111.359 105.539 1.00 39.00 O
ATOM 6 C5' G B2018 49.117 111.156 106.954 1.00 37.52 C
ATOM 7 C4' G B2018 50.496 110.872 107.487 1.00 35.90 C
ATOM 8 O4' G B2018 50.765 109.448 107.422 1.00 37.42 O
ATOM 9 C3' G B2018 51.626 111.559 106.730 1.00 38.05 C
ATOM 10 O3' G B2018 52.633 111.931 107.654 1.00 41.55 O
ATOM 11 C2' G B2018 52.112 110.453 105.792 1.00 37.28 C
ATOM 12 O2' G B2018 53.459 110.608 105.406 1.00 39.06 O
ATOM 13 C1' G B2018 51.933 109.210 106.663 1.00 34.34 C
ATOM 14 N9 G B2018 51.745 107.955 105.932 1.00 31.30 N
ATOM 15 C8 G B2018 50.669 107.605 105.149 1.00 29.75 C
ATOM 16 N7 G B2018 50.772 106.406 104.639 1.00 27.63 N
ATOM 17 C5 G B2018 51.990 105.935 105.108 1.00 29.82 C
ATOM 18 C6 G B2018 52.639 104.685 104.895 1.00 31.23 C
ATOM 19 O6 G B2018 52.263 103.724 104.217 1.00 31.84 O
ATOM 20 N1 G B2018 53.850 104.618 105.572 1.00 32.28 N
ATOM 21 C2 G B2018 54.375 105.619 106.347 1.00 31.81 C
ATOM 22 N2 G B2018 55.558 105.360 106.911 1.00 32.32 N
ATOM 23 N3 G B2018 53.787 106.786 106.552 1.00 31.68 N
ATOM 24 C4 G B2018 52.605 106.877 105.906 1.00 30.57 C
ATOM 25 P G B2019 52.928 113.484 107.936 1.00 39.12 P
ATOM 26 OP1 G B2019 53.633 114.057 106.770 1.00 36.84 O
ATOM 27 OP2 G B2019 53.538 113.569 109.286 1.00 42.90 O
ATOM 28 O5' G B2019 51.504 114.179 108.062 1.00 38.12 O
TER
ATOM 2 P A A2331 57.184 113.043 112.116 1.00 30.51 P
ATOM 3 OP1 A A2331 56.308 113.473 113.242 1.00 29.62 O
ATOM 4 OP2 A A2331 58.605 112.708 112.372 1.00 30.35 O
ATOM 5 O5' A A2331 56.554 111.769 111.394 1.00 31.52 O
ATOM 6 C5' A A2331 55.211 111.790 110.879 1.00 29.44 C
ATOM 7 C4' A A2331 54.952 110.550 110.056 1.00 30.34 C
ATOM 8 O4' A A2331 55.734 110.579 108.832 1.00 28.83 O
ATOM 9 C3' A A2331 55.349 109.247 110.730 1.00 29.91 C
ATOM 10 O3' A A2331 54.327 108.820 111.621 1.00 30.68 O
ATOM 11 C2' A A2331 55.531 108.310 109.541 1.00 31.04 C
ATOM 12 O2' A A2331 54.315 107.790 109.042 1.00 34.15 O
ATOM 13 C1' A A2331 56.143 109.257 108.501 1.00 31.07 C
ATOM 14 N9 A A2331 57.607 109.204 108.495 1.00 30.81 N
ATOM 15 C8 A A2331 58.494 110.124 108.997 1.00 30.46 C
ATOM 16 N7 A A2331 59.750 109.773 108.864 1.00 30.62 N
ATOM 17 C5 A A2331 59.688 108.543 108.226 1.00 28.67 C
ATOM 18 C6 A A2331 60.683 107.651 107.798 1.00 31.07 C
ATOM 19 N6 A A2331 61.991 107.865 107.972 1.00 31.02 N
ATOM 20 N1 A A2331 60.287 106.516 107.178 1.00 30.25 N
ATOM 21 C2 A A2331 58.978 106.301 107.013 1.00 29.20 C
ATOM 22 N3 A A2331 57.947 107.062 107.376 1.00 29.79 N
ATOM 23 C4 A A2331 58.376 108.183 107.984 1.00 29.47 C
ATOM 24 P G A2332 54.714 108.127 113.021 1.00 29.83 P
ATOM 25 OP1 G A2332 53.493 108.200 113.857 1.00 29.66 O
ATOM 26 OP2 G A2332 55.979 108.706 113.526 1.00 30.71 O
ATOM 27 O5' G A2332 55.005 106.608 112.644 1.00 28.79 O
TER
ATOM 1 O3' C B2017 48.828 110.315 103.311 1.00 37.45 O
ATOM 2 P G B2018 48.019 110.909 104.570 1.00 39.72 P
ATOM 3 OP1 G B2018 47.250 109.813 105.216 1.00 41.22 O
ATOM 4 OP2 G B2018 47.318 112.146 104.143 1.00 40.42 O
ATOM 5 O5' G B2018 49.189 111.359 105.539 1.00 39.00 O
ATOM 6 C5' G B2018 49.117 111.156 106.954 1.00 37.52 C
ATOM 7 C4' G B2018 50.496 110.872 107.487 1.00 35.90 C
ATOM 8 O4' G B2018 50.765 109.448 107.422 1.00 37.42 O
ATOM 9 C3' G B2018 51.626 111.559 106.730 1.00 38.05 C
ATOM 10 O3' G B2018 52.633 111.931 107.654 1.00 41.55 O
ATOM 11 C2' G B2018 52.112 110.453 105.792 1.00 37.28 C
ATOM 12 O2' G B2018 53.459 110.608 105.406 1.00 39.06 O
ATOM 13 C1' G B2018 51.933 109.210 106.663 1.00 34.34 C
ATOM 14 N9 G B2018 51.745 107.955 105.932 1.00 31.30 N
ATOM 15 C8 G B2018 50.669 107.605 105.149 1.00 29.75 C
ATOM 16 N7 G B2018 50.772 106.406 104.639 1.00 27.63 N
ATOM 17 C5 G B2018 51.990 105.935 105.108 1.00 29.82 C
ATOM 18 C6 G B2018 52.639 104.685 104.895 1.00 31.23 C
ATOM 19 O6 G B2018 52.263 103.724 104.217 1.00 31.84 O
ATOM 20 N1 G B2018 53.850 104.618 105.572 1.00 32.28 N
ATOM 21 C2 G B2018 54.375 105.619 106.347 1.00 31.81 C
ATOM 22 N2 G B2018 55.558 105.360 106.911 1.00 32.32 N
ATOM 23 N3 G B2018 53.787 106.786 106.552 1.00 31.68 N
ATOM 24 C4 G B2018 52.605 106.877 105.906 1.00 30.57 C
ATOM 25 P G B2019 52.928 113.484 107.936 1.00 39.12 P
ATOM 26 OP1 G B2019 53.633 114.057 106.770 1.00 36.84 O
ATOM 27 OP2 G B2019 53.538 113.569 109.286 1.00 42.90 O
ATOM 28 O5' G B2019 51.504 114.179 108.062 1.00 38.12 O
TER
Atoms:
OP1: (56.308,113.473,113.242)
OP2: (58.605,112.708,112.372)
C3': (55.349,109.247,110.730)
C1': (56.143,109.257,108.501)
C5': (55.211,111.790,110.879)
O4': (55.734,110.579,108.832)
C8: (58.494,110.124,108.997)
O2': (54.315,107.790,109.042)
C6: (60.683,107.651,107.798)
C5: (59.688,108.543,108.226)
C4: (58.376,108.183,107.984)
P: (57.184,113.043,112.116)
C4': (54.952,110.550,110.056)
C2': (55.531,108.310,109.541)
C2: (58.978,106.301,107.013)
N1: (60.287,106.516,107.178)
N3: (57.947,107.062,107.376)
N6: (61.991,107.865,107.972)
N7: (59.750,109.773,108.864)
N9: (57.607,109.204,108.495)
O5': (56.554,111.769,111.394)
O3': (54.327,108.820,111.621)
OP2: (58.605,112.708,112.372)
C3': (55.349,109.247,110.730)
C1': (56.143,109.257,108.501)
C5': (55.211,111.790,110.879)
O4': (55.734,110.579,108.832)
C8: (58.494,110.124,108.997)
O2': (54.315,107.790,109.042)
C6: (60.683,107.651,107.798)
C5: (59.688,108.543,108.226)
C4: (58.376,108.183,107.984)
P: (57.184,113.043,112.116)
C4': (54.952,110.550,110.056)
C2': (55.531,108.310,109.541)
C2: (58.978,106.301,107.013)
N1: (60.287,106.516,107.178)
N3: (57.947,107.062,107.376)
N6: (61.991,107.865,107.972)
N7: (59.750,109.773,108.864)
N9: (57.607,109.204,108.495)
O5': (56.554,111.769,111.394)
O3': (54.327,108.820,111.621)
OP1: (47.250,109.813,105.216)
OP2: (47.318,112.146,104.143)
C3': (51.626,111.559,106.730)
C1': (51.933,109.210,106.663)
C5': (49.117,111.156,106.954)
O6: (52.263,103.724,104.217)
O4': (50.765,109.448,107.422)
C8: (50.669,107.605,105.149)
C2: (54.375,105.619,106.347)
C6: (52.639,104.685,104.895)
C5: (51.990,105.935,105.108)
C4: (52.605,106.877,105.906)
P: (48.019,110.909,104.570)
C4': (50.496,110.872,107.487)
C2': (52.112,110.453,105.792)
O2': (53.459,110.608,105.406)
N1: (53.850,104.618,105.572)
N2: (55.558,105.360,106.911)
N3: (53.787,106.786,106.552)
N7: (50.772,106.406,104.639)
N9: (51.745,107.955,105.932)
O5': (49.189,111.359,105.539)
O3': (52.633,111.931,107.654)
OP2: (47.318,112.146,104.143)
C3': (51.626,111.559,106.730)
C1': (51.933,109.210,106.663)
C5': (49.117,111.156,106.954)
O6: (52.263,103.724,104.217)
O4': (50.765,109.448,107.422)
C8: (50.669,107.605,105.149)
C2: (54.375,105.619,106.347)
C6: (52.639,104.685,104.895)
C5: (51.990,105.935,105.108)
C4: (52.605,106.877,105.906)
P: (48.019,110.909,104.570)
C4': (50.496,110.872,107.487)
C2': (52.112,110.453,105.792)
O2': (53.459,110.608,105.406)
N1: (53.850,104.618,105.572)
N2: (55.558,105.360,106.911)
N3: (53.787,106.786,106.552)
N7: (50.772,106.406,104.639)
N9: (51.745,107.955,105.932)
O5': (49.189,111.359,105.539)
O3': (52.633,111.931,107.654)
Image (generated by PyMOL):