Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B31:B78
Extra
PDB:
ATOM 1 O3' G A 30 -5.615 -32.567 23.107 1.00 61.07 O
ATOM 2 P A A 31 -5.629 -32.934 21.559 1.00 60.19 P
ATOM 3 OP1 A A 31 -5.706 -34.409 21.496 1.00 59.89 O
ATOM 4 OP2 A A 31 -4.520 -32.199 20.908 1.00 60.75 O
ATOM 5 O5' A A 31 -7.000 -32.364 20.984 1.00 59.90 O
ATOM 6 C5' A A 31 -7.441 -31.064 21.302 1.00 59.83 C
ATOM 7 C4' A A 31 -8.909 -31.127 21.687 1.00 60.07 C
ATOM 8 O4' A A 31 -9.561 -32.240 21.020 1.00 58.98 O
ATOM 9 C3' A A 31 -9.180 -31.312 23.175 1.00 60.98 C
ATOM 10 O3' A A 31 -10.359 -30.621 23.569 1.00 63.97 O
ATOM 11 C2' A A 31 -9.419 -32.808 23.268 1.00 59.50 C
ATOM 12 O2' A A 31 -10.176 -33.155 24.411 1.00 59.42 O
ATOM 13 C1' A A 31 -10.202 -33.046 21.981 1.00 58.35 C
ATOM 14 N9 A A 31 -10.148 -34.438 21.563 1.00 56.64 N
ATOM 15 C8 A A 31 -9.069 -35.098 21.053 1.00 55.92 C
ATOM 16 N7 A A 31 -9.299 -36.356 20.778 1.00 55.36 N
ATOM 17 C5 A A 31 -10.619 -36.535 21.140 1.00 55.34 C
ATOM 18 C6 A A 31 -11.467 -37.656 21.097 1.00 54.81 C
ATOM 19 N6 A A 31 -11.073 -38.847 20.645 1.00 54.14 N
ATOM 20 N1 A A 31 -12.735 -37.503 21.533 1.00 54.93 N
ATOM 21 C2 A A 31 -13.126 -36.304 21.985 1.00 55.10 C
ATOM 22 N3 A A 31 -12.418 -35.179 22.069 1.00 55.60 N
ATOM 23 C4 A A 31 -11.162 -35.362 21.627 1.00 55.94 C
ATOM 24 P A A 32 -10.347 -29.063 23.919 1.00 66.19 P
ATOM 25 OP1 A A 32 -9.822 -28.342 22.740 1.00 66.06 O
ATOM 26 OP2 A A 32 -9.696 -28.897 25.241 1.00 66.24 O
ATOM 27 O5' A A 32 -11.910 -28.745 24.063 1.00 67.48 O
TER
ATOM 1 O3' G B 77 -19.465 -30.276 26.633 1.00 63.34 O
ATOM 2 P G B 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G B 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G B 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G B 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G B 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G B 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G B 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G B 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G B 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G B 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G B 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G B 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G B 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G B 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G B 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G B 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G B 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G B 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G B 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G B 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G B 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G B 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G B 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A B 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A B 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A B 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A B 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
ATOM 2 P A A 31 -5.629 -32.934 21.559 1.00 60.19 P
ATOM 3 OP1 A A 31 -5.706 -34.409 21.496 1.00 59.89 O
ATOM 4 OP2 A A 31 -4.520 -32.199 20.908 1.00 60.75 O
ATOM 5 O5' A A 31 -7.000 -32.364 20.984 1.00 59.90 O
ATOM 6 C5' A A 31 -7.441 -31.064 21.302 1.00 59.83 C
ATOM 7 C4' A A 31 -8.909 -31.127 21.687 1.00 60.07 C
ATOM 8 O4' A A 31 -9.561 -32.240 21.020 1.00 58.98 O
ATOM 9 C3' A A 31 -9.180 -31.312 23.175 1.00 60.98 C
ATOM 10 O3' A A 31 -10.359 -30.621 23.569 1.00 63.97 O
ATOM 11 C2' A A 31 -9.419 -32.808 23.268 1.00 59.50 C
ATOM 12 O2' A A 31 -10.176 -33.155 24.411 1.00 59.42 O
ATOM 13 C1' A A 31 -10.202 -33.046 21.981 1.00 58.35 C
ATOM 14 N9 A A 31 -10.148 -34.438 21.563 1.00 56.64 N
ATOM 15 C8 A A 31 -9.069 -35.098 21.053 1.00 55.92 C
ATOM 16 N7 A A 31 -9.299 -36.356 20.778 1.00 55.36 N
ATOM 17 C5 A A 31 -10.619 -36.535 21.140 1.00 55.34 C
ATOM 18 C6 A A 31 -11.467 -37.656 21.097 1.00 54.81 C
ATOM 19 N6 A A 31 -11.073 -38.847 20.645 1.00 54.14 N
ATOM 20 N1 A A 31 -12.735 -37.503 21.533 1.00 54.93 N
ATOM 21 C2 A A 31 -13.126 -36.304 21.985 1.00 55.10 C
ATOM 22 N3 A A 31 -12.418 -35.179 22.069 1.00 55.60 N
ATOM 23 C4 A A 31 -11.162 -35.362 21.627 1.00 55.94 C
ATOM 24 P A A 32 -10.347 -29.063 23.919 1.00 66.19 P
ATOM 25 OP1 A A 32 -9.822 -28.342 22.740 1.00 66.06 O
ATOM 26 OP2 A A 32 -9.696 -28.897 25.241 1.00 66.24 O
ATOM 27 O5' A A 32 -11.910 -28.745 24.063 1.00 67.48 O
TER
ATOM 1 O3' G B 77 -19.465 -30.276 26.633 1.00 63.34 O
ATOM 2 P G B 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G B 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G B 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G B 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G B 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G B 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G B 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G B 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G B 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G B 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G B 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G B 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G B 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G B 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G B 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G B 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G B 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G B 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G B 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G B 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G B 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G B 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G B 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A B 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A B 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A B 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A B 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
Atoms:
OP1: (-5.706,-34.409,21.496)
OP2: (-4.520,-32.199,20.908)
C3': (-9.180,-31.312,23.175)
C1': (-10.202,-33.046,21.981)
C5': (-7.441,-31.064,21.302)
O4': (-9.561,-32.240,21.020)
C8: (-9.069,-35.098,21.053)
O2': (-10.176,-33.155,24.411)
C6: (-11.467,-37.656,21.097)
C5: (-10.619,-36.535,21.140)
C4: (-11.162,-35.362,21.627)
P: (-5.629,-32.934,21.559)
C4': (-8.909,-31.127,21.687)
C2': (-9.419,-32.808,23.268)
C2: (-13.126,-36.304,21.985)
N1: (-12.735,-37.503,21.533)
N3: (-12.418,-35.179,22.069)
N6: (-11.073,-38.847,20.645)
N7: (-9.299,-36.356,20.778)
N9: (-10.148,-34.438,21.563)
O5': (-7.000,-32.364,20.984)
O3': (-10.359,-30.621,23.569)
OP2: (-4.520,-32.199,20.908)
C3': (-9.180,-31.312,23.175)
C1': (-10.202,-33.046,21.981)
C5': (-7.441,-31.064,21.302)
O4': (-9.561,-32.240,21.020)
C8: (-9.069,-35.098,21.053)
O2': (-10.176,-33.155,24.411)
C6: (-11.467,-37.656,21.097)
C5: (-10.619,-36.535,21.140)
C4: (-11.162,-35.362,21.627)
P: (-5.629,-32.934,21.559)
C4': (-8.909,-31.127,21.687)
C2': (-9.419,-32.808,23.268)
C2: (-13.126,-36.304,21.985)
N1: (-12.735,-37.503,21.533)
N3: (-12.418,-35.179,22.069)
N6: (-11.073,-38.847,20.645)
N7: (-9.299,-36.356,20.778)
N9: (-10.148,-34.438,21.563)
O5': (-7.000,-32.364,20.984)
O3': (-10.359,-30.621,23.569)
OP1: (-20.103,-29.262,24.460)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
Image (generated by PyMOL):