Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0615:02374
Extra
PDB:
ATOM 1 O3' U A 614 45.777 102.128 92.625 1.00 25.08 O
ATOM 2 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 3 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 4 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 5 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
ATOM 6 C5' G A 615 43.988 103.960 94.486 1.00 26.05 C
ATOM 7 C4' G A 615 44.232 104.644 95.812 1.00 28.71 C
ATOM 8 O4' G A 615 45.503 104.217 96.363 1.00 30.28 O
ATOM 9 C3' G A 615 44.314 106.160 95.785 1.00 28.99 C
ATOM 10 O3' G A 615 43.002 106.723 95.853 1.00 29.16 O
ATOM 11 C2' G A 615 45.113 106.448 97.053 1.00 29.00 C
ATOM 12 O2' G A 615 44.324 106.321 98.216 1.00 31.14 O
ATOM 13 C1' G A 615 46.114 105.292 97.054 1.00 28.88 C
ATOM 14 N9 G A 615 47.387 105.595 96.395 1.00 32.15 N
ATOM 15 C8 G A 615 47.635 105.603 95.041 1.00 30.03 C
ATOM 16 N7 G A 615 48.866 105.911 94.748 1.00 28.58 N
ATOM 17 C5 G A 615 49.472 106.122 95.976 1.00 29.32 C
ATOM 18 C6 G A 615 50.802 106.486 96.284 1.00 30.22 C
ATOM 19 O6 G A 615 51.734 106.709 95.510 1.00 30.27 O
ATOM 20 N1 G A 615 51.000 106.588 97.656 1.00 30.67 N
ATOM 21 C2 G A 615 50.035 106.376 98.609 1.00 30.57 C
ATOM 22 N2 G A 615 50.415 106.540 99.883 1.00 27.99 N
ATOM 23 N3 G A 615 48.788 106.033 98.332 1.00 30.19 N
ATOM 24 C4 G A 615 48.577 105.927 97.005 1.00 29.53 C
TER
ATOM 1 O3' A B2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 2 P C B2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 3 OP1 C B2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 4 OP2 C B2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 5 O5' C B2374 55.921 103.764 99.061 1.00 35.87 O
ATOM 6 C5' C B2374 55.733 103.991 100.449 1.00 34.48 C
ATOM 7 C4' C B2374 54.560 104.917 100.691 1.00 34.40 C
ATOM 8 O4' C B2374 54.437 105.050 102.134 1.00 34.22 O
ATOM 9 C3' C B2374 54.734 106.344 100.158 1.00 35.32 C
ATOM 10 O3' C B2374 54.096 106.575 98.902 1.00 36.28 O
ATOM 11 C2' C B2374 54.171 107.211 101.275 1.00 34.23 C
ATOM 12 O2' C B2374 52.767 107.326 101.246 1.00 33.61 O
ATOM 13 C1' C B2374 54.603 106.409 102.502 1.00 36.82 C
ATOM 14 N1 C B2374 56.024 106.650 102.862 1.00 36.69 N
ATOM 15 C2 C B2374 56.350 107.855 103.495 1.00 38.45 C
ATOM 16 O2 C B2374 55.437 108.659 103.766 1.00 40.83 O
ATOM 17 N3 C B2374 57.648 108.118 103.792 1.00 37.92 N
ATOM 18 C4 C B2374 58.598 107.232 103.481 1.00 37.74 C
ATOM 19 N4 C B2374 59.863 107.546 103.774 1.00 36.48 N
ATOM 20 C5 C B2374 58.293 105.988 102.852 1.00 36.58 C
ATOM 21 C6 C B2374 57.007 105.739 102.569 1.00 36.25 C
ATOM 22 P C B2375 54.607 107.774 97.949 1.00 39.07 P
ATOM 23 OP1 C B2375 53.725 107.831 96.760 1.00 39.47 O
ATOM 24 OP2 C B2375 56.075 107.648 97.771 1.00 38.57 O
ATOM 25 O5' C B2375 54.342 109.103 98.780 1.00 39.39 O
TER
ATOM 2 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 3 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 4 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 5 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
ATOM 6 C5' G A 615 43.988 103.960 94.486 1.00 26.05 C
ATOM 7 C4' G A 615 44.232 104.644 95.812 1.00 28.71 C
ATOM 8 O4' G A 615 45.503 104.217 96.363 1.00 30.28 O
ATOM 9 C3' G A 615 44.314 106.160 95.785 1.00 28.99 C
ATOM 10 O3' G A 615 43.002 106.723 95.853 1.00 29.16 O
ATOM 11 C2' G A 615 45.113 106.448 97.053 1.00 29.00 C
ATOM 12 O2' G A 615 44.324 106.321 98.216 1.00 31.14 O
ATOM 13 C1' G A 615 46.114 105.292 97.054 1.00 28.88 C
ATOM 14 N9 G A 615 47.387 105.595 96.395 1.00 32.15 N
ATOM 15 C8 G A 615 47.635 105.603 95.041 1.00 30.03 C
ATOM 16 N7 G A 615 48.866 105.911 94.748 1.00 28.58 N
ATOM 17 C5 G A 615 49.472 106.122 95.976 1.00 29.32 C
ATOM 18 C6 G A 615 50.802 106.486 96.284 1.00 30.22 C
ATOM 19 O6 G A 615 51.734 106.709 95.510 1.00 30.27 O
ATOM 20 N1 G A 615 51.000 106.588 97.656 1.00 30.67 N
ATOM 21 C2 G A 615 50.035 106.376 98.609 1.00 30.57 C
ATOM 22 N2 G A 615 50.415 106.540 99.883 1.00 27.99 N
ATOM 23 N3 G A 615 48.788 106.033 98.332 1.00 30.19 N
ATOM 24 C4 G A 615 48.577 105.927 97.005 1.00 29.53 C
TER
ATOM 1 O3' A B2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 2 P C B2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 3 OP1 C B2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 4 OP2 C B2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 5 O5' C B2374 55.921 103.764 99.061 1.00 35.87 O
ATOM 6 C5' C B2374 55.733 103.991 100.449 1.00 34.48 C
ATOM 7 C4' C B2374 54.560 104.917 100.691 1.00 34.40 C
ATOM 8 O4' C B2374 54.437 105.050 102.134 1.00 34.22 O
ATOM 9 C3' C B2374 54.734 106.344 100.158 1.00 35.32 C
ATOM 10 O3' C B2374 54.096 106.575 98.902 1.00 36.28 O
ATOM 11 C2' C B2374 54.171 107.211 101.275 1.00 34.23 C
ATOM 12 O2' C B2374 52.767 107.326 101.246 1.00 33.61 O
ATOM 13 C1' C B2374 54.603 106.409 102.502 1.00 36.82 C
ATOM 14 N1 C B2374 56.024 106.650 102.862 1.00 36.69 N
ATOM 15 C2 C B2374 56.350 107.855 103.495 1.00 38.45 C
ATOM 16 O2 C B2374 55.437 108.659 103.766 1.00 40.83 O
ATOM 17 N3 C B2374 57.648 108.118 103.792 1.00 37.92 N
ATOM 18 C4 C B2374 58.598 107.232 103.481 1.00 37.74 C
ATOM 19 N4 C B2374 59.863 107.546 103.774 1.00 36.48 N
ATOM 20 C5 C B2374 58.293 105.988 102.852 1.00 36.58 C
ATOM 21 C6 C B2374 57.007 105.739 102.569 1.00 36.25 C
ATOM 22 P C B2375 54.607 107.774 97.949 1.00 39.07 P
ATOM 23 OP1 C B2375 53.725 107.831 96.760 1.00 39.47 O
ATOM 24 OP2 C B2375 56.075 107.648 97.771 1.00 38.57 O
ATOM 25 O5' C B2375 54.342 109.103 98.780 1.00 39.39 O
TER
Atoms:
OP1: (43.857,103.220,91.574)
OP2: (46.179,104.260,91.357)
C3': (44.314,106.160,95.785)
C1': (46.114,105.292,97.054)
C5': (43.988,103.960,94.486)
O6: (51.734,106.709,95.510)
O4': (45.503,104.217,96.363)
C8: (47.635,105.603,95.041)
C2: (50.035,106.376,98.609)
C6: (50.802,106.486,96.284)
C5: (49.472,106.122,95.976)
C4: (48.577,105.927,97.005)
P: (45.176,103.546,92.170)
C4': (44.232,104.644,95.812)
C2': (45.113,106.448,97.053)
O2': (44.324,106.321,98.216)
N1: (51.000,106.588,97.656)
N2: (50.415,106.540,99.883)
N3: (48.788,106.033,98.332)
N7: (48.866,105.911,94.748)
N9: (47.387,105.595,96.395)
O5': (44.970,104.364,93.525)
O3': (43.002,106.723,95.853)
OP2: (46.179,104.260,91.357)
C3': (44.314,106.160,95.785)
C1': (46.114,105.292,97.054)
C5': (43.988,103.960,94.486)
O6: (51.734,106.709,95.510)
O4': (45.503,104.217,96.363)
C8: (47.635,105.603,95.041)
C2: (50.035,106.376,98.609)
C6: (50.802,106.486,96.284)
C5: (49.472,106.122,95.976)
C4: (48.577,105.927,97.005)
P: (45.176,103.546,92.170)
C4': (44.232,104.644,95.812)
C2': (45.113,106.448,97.053)
O2': (44.324,106.321,98.216)
N1: (51.000,106.588,97.656)
N2: (50.415,106.540,99.883)
N3: (48.788,106.033,98.332)
N7: (48.866,105.911,94.748)
N9: (47.387,105.595,96.395)
O5': (44.970,104.364,93.525)
O3': (43.002,106.723,95.853)
C2: (56.350,107.855,103.495)
OP1: (57.610,102.669,97.628)
OP2: (57.304,105.228,97.620)
C4: (58.598,107.232,103.481)
O5': (55.921,103.764,99.061)
C3': (54.734,106.344,100.158)
C1': (54.603,106.409,102.502)
O4': (54.437,105.050,102.134)
C5': (55.733,103.991,100.449)
P: (57.344,103.939,98.361)
O2: (55.437,108.659,103.766)
C4': (54.560,104.917,100.691)
C2': (54.171,107.211,101.275)
O2': (52.767,107.326,101.246)
N1: (56.024,106.650,102.862)
N3: (57.648,108.118,103.792)
N4: (59.863,107.546,103.774)
C6: (57.007,105.739,102.569)
C5: (58.293,105.988,102.852)
O3': (54.096,106.575,98.902)
OP1: (57.610,102.669,97.628)
OP2: (57.304,105.228,97.620)
C4: (58.598,107.232,103.481)
O5': (55.921,103.764,99.061)
C3': (54.734,106.344,100.158)
C1': (54.603,106.409,102.502)
O4': (54.437,105.050,102.134)
C5': (55.733,103.991,100.449)
P: (57.344,103.939,98.361)
O2: (55.437,108.659,103.766)
C4': (54.560,104.917,100.691)
C2': (54.171,107.211,101.275)
O2': (52.767,107.326,101.246)
N1: (56.024,106.650,102.862)
N3: (57.648,108.118,103.792)
N4: (59.863,107.546,103.774)
C6: (57.007,105.739,102.569)
C5: (58.293,105.988,102.852)
O3': (54.096,106.575,98.902)
Image (generated by PyMOL):