Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0615:02374
Extra
PDB:
ATOM 1 O3' U A 614 45.817 102.010 92.694 1.00 31.94 O
ATOM 2 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 3 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 4 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 5 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
ATOM 6 C5' G A 615 43.991 103.831 94.463 1.00 29.85 C
ATOM 7 C4' G A 615 44.237 104.511 95.780 1.00 31.94 C
ATOM 8 O4' G A 615 45.522 104.080 96.296 1.00 32.25 O
ATOM 9 C3' G A 615 44.342 106.028 95.719 1.00 31.30 C
ATOM 10 O3' G A 615 43.044 106.628 95.783 1.00 32.57 O
ATOM 11 C2' G A 615 45.167 106.332 96.963 1.00 30.97 C
ATOM 12 O2' G A 615 44.388 106.287 98.139 1.00 29.56 O
ATOM 13 C1' G A 615 46.145 105.154 96.977 1.00 32.39 C
ATOM 14 N9 G A 615 47.424 105.434 96.325 1.00 35.10 N
ATOM 15 C8 G A 615 47.702 105.390 94.979 1.00 35.79 C
ATOM 16 N7 G A 615 48.933 105.712 94.701 1.00 33.74 N
ATOM 17 C5 G A 615 49.504 105.980 95.932 1.00 33.02 C
ATOM 18 C6 G A 615 50.807 106.373 96.255 1.00 33.73 C
ATOM 19 O6 G A 615 51.757 106.569 95.492 1.00 35.26 O
ATOM 20 N1 G A 615 50.968 106.533 97.626 1.00 33.99 N
ATOM 21 C2 G A 615 49.988 106.336 98.564 1.00 33.97 C
ATOM 22 N2 G A 615 50.327 106.537 99.843 1.00 33.07 N
ATOM 23 N3 G A 615 48.762 105.967 98.270 1.00 34.53 N
ATOM 24 C4 G A 615 48.590 105.807 96.945 1.00 33.92 C
TER
ATOM 1 O3' A B2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 2 P C B2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 3 OP1 C B2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 4 OP2 C B2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 5 O5' C B2374 55.954 103.700 98.945 1.00 34.71 O
ATOM 6 C5' C B2374 55.713 103.815 100.336 1.00 34.04 C
ATOM 7 C4' C B2374 54.576 104.772 100.602 1.00 33.72 C
ATOM 8 O4' C B2374 54.462 104.888 102.045 1.00 35.77 O
ATOM 9 C3' C B2374 54.795 106.196 100.103 1.00 34.21 C
ATOM 10 O3' C B2374 54.159 106.450 98.864 1.00 36.76 O
ATOM 11 C2' C B2374 54.211 107.048 101.213 1.00 33.95 C
ATOM 12 O2' C B2374 52.809 107.119 101.140 1.00 33.36 O
ATOM 13 C1' C B2374 54.623 106.236 102.434 1.00 34.83 C
ATOM 14 N1 C B2374 56.035 106.460 102.820 1.00 35.03 N
ATOM 15 C2 C B2374 56.347 107.613 103.535 1.00 36.69 C
ATOM 16 O2 C B2374 55.432 108.393 103.841 1.00 39.01 O
ATOM 17 N3 C B2374 57.637 107.856 103.874 1.00 36.51 N
ATOM 18 C4 C B2374 58.593 106.995 103.520 1.00 34.49 C
ATOM 19 N4 C B2374 59.851 107.283 103.863 1.00 31.57 N
ATOM 20 C5 C B2374 58.301 105.804 102.798 1.00 33.43 C
ATOM 21 C6 C B2374 57.023 105.575 102.478 1.00 33.71 C
ATOM 22 P C B2375 54.633 107.698 97.975 1.00 39.53 P
ATOM 23 OP1 C B2375 53.713 107.831 96.822 1.00 37.57 O
ATOM 24 OP2 C B2375 56.094 107.576 97.741 1.00 39.40 O
ATOM 25 O5' C B2375 54.391 108.947 98.917 1.00 38.00 O
TER
ATOM 2 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 3 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 4 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 5 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
ATOM 6 C5' G A 615 43.991 103.831 94.463 1.00 29.85 C
ATOM 7 C4' G A 615 44.237 104.511 95.780 1.00 31.94 C
ATOM 8 O4' G A 615 45.522 104.080 96.296 1.00 32.25 O
ATOM 9 C3' G A 615 44.342 106.028 95.719 1.00 31.30 C
ATOM 10 O3' G A 615 43.044 106.628 95.783 1.00 32.57 O
ATOM 11 C2' G A 615 45.167 106.332 96.963 1.00 30.97 C
ATOM 12 O2' G A 615 44.388 106.287 98.139 1.00 29.56 O
ATOM 13 C1' G A 615 46.145 105.154 96.977 1.00 32.39 C
ATOM 14 N9 G A 615 47.424 105.434 96.325 1.00 35.10 N
ATOM 15 C8 G A 615 47.702 105.390 94.979 1.00 35.79 C
ATOM 16 N7 G A 615 48.933 105.712 94.701 1.00 33.74 N
ATOM 17 C5 G A 615 49.504 105.980 95.932 1.00 33.02 C
ATOM 18 C6 G A 615 50.807 106.373 96.255 1.00 33.73 C
ATOM 19 O6 G A 615 51.757 106.569 95.492 1.00 35.26 O
ATOM 20 N1 G A 615 50.968 106.533 97.626 1.00 33.99 N
ATOM 21 C2 G A 615 49.988 106.336 98.564 1.00 33.97 C
ATOM 22 N2 G A 615 50.327 106.537 99.843 1.00 33.07 N
ATOM 23 N3 G A 615 48.762 105.967 98.270 1.00 34.53 N
ATOM 24 C4 G A 615 48.590 105.807 96.945 1.00 33.92 C
TER
ATOM 1 O3' A B2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 2 P C B2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 3 OP1 C B2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 4 OP2 C B2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 5 O5' C B2374 55.954 103.700 98.945 1.00 34.71 O
ATOM 6 C5' C B2374 55.713 103.815 100.336 1.00 34.04 C
ATOM 7 C4' C B2374 54.576 104.772 100.602 1.00 33.72 C
ATOM 8 O4' C B2374 54.462 104.888 102.045 1.00 35.77 O
ATOM 9 C3' C B2374 54.795 106.196 100.103 1.00 34.21 C
ATOM 10 O3' C B2374 54.159 106.450 98.864 1.00 36.76 O
ATOM 11 C2' C B2374 54.211 107.048 101.213 1.00 33.95 C
ATOM 12 O2' C B2374 52.809 107.119 101.140 1.00 33.36 O
ATOM 13 C1' C B2374 54.623 106.236 102.434 1.00 34.83 C
ATOM 14 N1 C B2374 56.035 106.460 102.820 1.00 35.03 N
ATOM 15 C2 C B2374 56.347 107.613 103.535 1.00 36.69 C
ATOM 16 O2 C B2374 55.432 108.393 103.841 1.00 39.01 O
ATOM 17 N3 C B2374 57.637 107.856 103.874 1.00 36.51 N
ATOM 18 C4 C B2374 58.593 106.995 103.520 1.00 34.49 C
ATOM 19 N4 C B2374 59.851 107.283 103.863 1.00 31.57 N
ATOM 20 C5 C B2374 58.301 105.804 102.798 1.00 33.43 C
ATOM 21 C6 C B2374 57.023 105.575 102.478 1.00 33.71 C
ATOM 22 P C B2375 54.633 107.698 97.975 1.00 39.53 P
ATOM 23 OP1 C B2375 53.713 107.831 96.822 1.00 37.57 O
ATOM 24 OP2 C B2375 56.094 107.576 97.741 1.00 39.40 O
ATOM 25 O5' C B2375 54.391 108.947 98.917 1.00 38.00 O
TER
Atoms:
OP1: (43.932,103.174,91.533)
OP2: (46.299,104.099,91.434)
C3': (44.342,106.028,95.719)
C1': (46.145,105.154,96.977)
C5': (43.991,103.831,94.463)
O6: (51.757,106.569,95.492)
O4': (45.522,104.080,96.296)
C8: (47.702,105.390,94.979)
C2: (49.988,106.336,98.564)
C6: (50.807,106.373,96.255)
C5: (49.504,105.980,95.932)
C4: (48.590,105.807,96.945)
P: (45.234,103.415,92.186)
C4': (44.237,104.511,95.780)
C2': (45.167,106.332,96.963)
O2': (44.388,106.287,98.139)
N1: (50.968,106.533,97.626)
N2: (50.327,106.537,99.843)
N3: (48.762,105.967,98.270)
N7: (48.933,105.712,94.701)
N9: (47.424,105.434,96.325)
O5': (44.985,104.239,93.520)
O3': (43.044,106.628,95.783)
OP2: (46.299,104.099,91.434)
C3': (44.342,106.028,95.719)
C1': (46.145,105.154,96.977)
C5': (43.991,103.831,94.463)
O6: (51.757,106.569,95.492)
O4': (45.522,104.080,96.296)
C8: (47.702,105.390,94.979)
C2: (49.988,106.336,98.564)
C6: (50.807,106.373,96.255)
C5: (49.504,105.980,95.932)
C4: (48.590,105.807,96.945)
P: (45.234,103.415,92.186)
C4': (44.237,104.511,95.780)
C2': (45.167,106.332,96.963)
O2': (44.388,106.287,98.139)
N1: (50.968,106.533,97.626)
N2: (50.327,106.537,99.843)
N3: (48.762,105.967,98.270)
N7: (48.933,105.712,94.701)
N9: (47.424,105.434,96.325)
O5': (44.985,104.239,93.520)
O3': (43.044,106.628,95.783)
C2: (56.347,107.613,103.535)
OP1: (57.714,102.702,97.530)
OP2: (57.412,105.254,97.680)
C4: (58.593,106.995,103.520)
O5': (55.954,103.700,98.945)
C3': (54.795,106.196,100.103)
C1': (54.623,106.236,102.434)
O4': (54.462,104.888,102.045)
C5': (55.713,103.815,100.336)
P: (57.405,103.920,98.327)
O2: (55.432,108.393,103.841)
C4': (54.576,104.772,100.602)
C2': (54.211,107.048,101.213)
O2': (52.809,107.119,101.140)
N1: (56.035,106.460,102.820)
N3: (57.637,107.856,103.874)
N4: (59.851,107.283,103.863)
C6: (57.023,105.575,102.478)
C5: (58.301,105.804,102.798)
O3': (54.159,106.450,98.864)
OP1: (57.714,102.702,97.530)
OP2: (57.412,105.254,97.680)
C4: (58.593,106.995,103.520)
O5': (55.954,103.700,98.945)
C3': (54.795,106.196,100.103)
C1': (54.623,106.236,102.434)
O4': (54.462,104.888,102.045)
C5': (55.713,103.815,100.336)
P: (57.405,103.920,98.327)
O2: (55.432,108.393,103.841)
C4': (54.576,104.772,100.602)
C2': (54.211,107.048,101.213)
O2': (52.809,107.119,101.140)
N1: (56.035,106.460,102.820)
N3: (57.637,107.856,103.874)
N4: (59.851,107.283,103.863)
C6: (57.023,105.575,102.478)
C5: (58.301,105.804,102.798)
O3': (54.159,106.450,98.864)
Image (generated by PyMOL):