Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2875:A2808
Extra
PDB:
ATOM 1 O3' A A2874 -3.338 88.716 208.192 1.00 19.75 O
ATOM 2 P A A2875 -4.432 88.916 209.353 1.00 6.83 P
ATOM 3 OP1 A A2875 -5.336 90.015 208.920 1.00 6.83 O
ATOM 4 OP2 A A2875 -3.683 89.065 210.622 1.00 6.83 O
ATOM 5 O5' A A2875 -5.234 87.562 209.359 1.00 6.83 O
ATOM 6 C5' A A2875 -6.437 87.460 210.088 1.00 6.83 C
ATOM 7 C4' A A2875 -7.642 87.709 209.226 1.00 6.83 C
ATOM 8 O4' A A2875 -7.614 86.835 208.065 1.00 6.83 O
ATOM 9 C3' A A2875 -8.962 87.396 209.886 1.00 6.83 C
ATOM 10 O3' A A2875 -9.407 88.435 210.729 1.00 6.83 O
ATOM 11 C2' A A2875 -9.879 87.104 208.705 1.00 6.83 C
ATOM 12 O2' A A2875 -10.338 88.296 208.097 1.00 6.83 O
ATOM 13 C1' A A2875 -8.922 86.402 207.748 1.00 6.83 C
ATOM 14 N9 A A2875 -8.985 84.947 207.916 1.00 7.11 N
ATOM 15 C8 A A2875 -8.089 84.210 208.596 1.00 7.11 C
ATOM 16 N7 A A2875 -8.403 82.943 208.641 1.00 7.11 N
ATOM 17 C5 A A2875 -9.588 82.825 207.959 1.00 7.11 C
ATOM 18 C6 A A2875 -10.416 81.720 207.679 1.00 7.11 C
ATOM 19 N6 A A2875 -10.153 80.469 208.054 1.00 7.11 N
ATOM 20 N1 A A2875 -11.547 81.946 206.977 1.00 7.11 N
ATOM 21 C2 A A2875 -11.803 83.202 206.603 1.00 7.11 C
ATOM 22 N3 A A2875 -11.085 84.309 206.820 1.00 7.11 N
ATOM 23 C4 A A2875 -9.966 84.064 207.514 1.00 7.11 C
ATOM 24 P U A2876 -9.722 88.131 212.266 1.00 6.93 P
ATOM 25 OP1 U A2876 -10.211 86.743 212.342 1.00 6.93 O
ATOM 26 OP2 U A2876 -10.595 89.220 212.755 1.00 6.93 O
ATOM 27 O5' U A2876 -8.294 88.246 212.940 1.00 6.93 O
TER
ATOM 1 O3' C B2807 -12.204 96.595 207.448 1.00 2.59 O
ATOM 2 P G B2808 -12.208 96.061 205.918 1.00 16.34 P
ATOM 3 OP1 G B2808 -11.302 96.948 205.152 1.00 16.34 O
ATOM 4 OP2 G B2808 -13.622 95.936 205.476 1.00 16.34 O
ATOM 5 O5' G B2808 -11.572 94.623 206.058 1.00 16.34 O
ATOM 6 C5' G B2808 -10.331 94.464 206.706 1.00 16.34 C
ATOM 7 C4' G B2808 -10.017 93.025 206.941 1.00 16.34 C
ATOM 8 O4' G B2808 -10.979 92.456 207.853 1.00 16.34 O
ATOM 9 C3' G B2808 -10.104 92.137 205.726 1.00 16.34 C
ATOM 10 O3' G B2808 -8.965 92.211 204.923 1.00 16.34 O
ATOM 11 C2' G B2808 -10.313 90.768 206.325 1.00 16.34 C
ATOM 12 O2' G B2808 -9.075 90.246 206.794 1.00 16.34 O
ATOM 13 C1' G B2808 -11.184 91.100 207.528 1.00 16.34 C
ATOM 14 N9 G B2808 -12.606 90.900 207.271 1.00 16.87 N
ATOM 15 C8 G B2808 -13.553 91.872 207.174 1.00 16.87 C
ATOM 16 N7 G B2808 -14.749 91.377 207.018 1.00 16.87 N
ATOM 17 C5 G B2808 -14.578 89.993 207.036 1.00 16.87 C
ATOM 18 C6 G B2808 -15.526 88.916 206.925 1.00 16.87 C
ATOM 19 O6 G B2808 -16.758 88.956 206.758 1.00 16.87 O
ATOM 20 N1 G B2808 -14.885 87.683 207.020 1.00 16.87 N
ATOM 21 C2 G B2808 -13.525 87.530 207.201 1.00 16.87 C
ATOM 22 N2 G B2808 -13.076 86.277 207.273 1.00 16.87 N
ATOM 23 N3 G B2808 -12.639 88.511 207.309 1.00 16.87 N
ATOM 24 C4 G B2808 -13.239 89.704 207.211 1.00 16.87 C
ATOM 25 P U B2809 -9.007 91.507 203.510 1.00 4.04 P
ATOM 26 OP1 U B2809 -7.625 91.522 202.972 1.00 4.04 O
ATOM 27 OP2 U B2809 -10.087 92.167 202.727 1.00 4.04 O
ATOM 28 O5' U B2809 -9.453 90.024 203.887 1.00 4.04 O
TER
ATOM 2 P A A2875 -4.432 88.916 209.353 1.00 6.83 P
ATOM 3 OP1 A A2875 -5.336 90.015 208.920 1.00 6.83 O
ATOM 4 OP2 A A2875 -3.683 89.065 210.622 1.00 6.83 O
ATOM 5 O5' A A2875 -5.234 87.562 209.359 1.00 6.83 O
ATOM 6 C5' A A2875 -6.437 87.460 210.088 1.00 6.83 C
ATOM 7 C4' A A2875 -7.642 87.709 209.226 1.00 6.83 C
ATOM 8 O4' A A2875 -7.614 86.835 208.065 1.00 6.83 O
ATOM 9 C3' A A2875 -8.962 87.396 209.886 1.00 6.83 C
ATOM 10 O3' A A2875 -9.407 88.435 210.729 1.00 6.83 O
ATOM 11 C2' A A2875 -9.879 87.104 208.705 1.00 6.83 C
ATOM 12 O2' A A2875 -10.338 88.296 208.097 1.00 6.83 O
ATOM 13 C1' A A2875 -8.922 86.402 207.748 1.00 6.83 C
ATOM 14 N9 A A2875 -8.985 84.947 207.916 1.00 7.11 N
ATOM 15 C8 A A2875 -8.089 84.210 208.596 1.00 7.11 C
ATOM 16 N7 A A2875 -8.403 82.943 208.641 1.00 7.11 N
ATOM 17 C5 A A2875 -9.588 82.825 207.959 1.00 7.11 C
ATOM 18 C6 A A2875 -10.416 81.720 207.679 1.00 7.11 C
ATOM 19 N6 A A2875 -10.153 80.469 208.054 1.00 7.11 N
ATOM 20 N1 A A2875 -11.547 81.946 206.977 1.00 7.11 N
ATOM 21 C2 A A2875 -11.803 83.202 206.603 1.00 7.11 C
ATOM 22 N3 A A2875 -11.085 84.309 206.820 1.00 7.11 N
ATOM 23 C4 A A2875 -9.966 84.064 207.514 1.00 7.11 C
ATOM 24 P U A2876 -9.722 88.131 212.266 1.00 6.93 P
ATOM 25 OP1 U A2876 -10.211 86.743 212.342 1.00 6.93 O
ATOM 26 OP2 U A2876 -10.595 89.220 212.755 1.00 6.93 O
ATOM 27 O5' U A2876 -8.294 88.246 212.940 1.00 6.93 O
TER
ATOM 1 O3' C B2807 -12.204 96.595 207.448 1.00 2.59 O
ATOM 2 P G B2808 -12.208 96.061 205.918 1.00 16.34 P
ATOM 3 OP1 G B2808 -11.302 96.948 205.152 1.00 16.34 O
ATOM 4 OP2 G B2808 -13.622 95.936 205.476 1.00 16.34 O
ATOM 5 O5' G B2808 -11.572 94.623 206.058 1.00 16.34 O
ATOM 6 C5' G B2808 -10.331 94.464 206.706 1.00 16.34 C
ATOM 7 C4' G B2808 -10.017 93.025 206.941 1.00 16.34 C
ATOM 8 O4' G B2808 -10.979 92.456 207.853 1.00 16.34 O
ATOM 9 C3' G B2808 -10.104 92.137 205.726 1.00 16.34 C
ATOM 10 O3' G B2808 -8.965 92.211 204.923 1.00 16.34 O
ATOM 11 C2' G B2808 -10.313 90.768 206.325 1.00 16.34 C
ATOM 12 O2' G B2808 -9.075 90.246 206.794 1.00 16.34 O
ATOM 13 C1' G B2808 -11.184 91.100 207.528 1.00 16.34 C
ATOM 14 N9 G B2808 -12.606 90.900 207.271 1.00 16.87 N
ATOM 15 C8 G B2808 -13.553 91.872 207.174 1.00 16.87 C
ATOM 16 N7 G B2808 -14.749 91.377 207.018 1.00 16.87 N
ATOM 17 C5 G B2808 -14.578 89.993 207.036 1.00 16.87 C
ATOM 18 C6 G B2808 -15.526 88.916 206.925 1.00 16.87 C
ATOM 19 O6 G B2808 -16.758 88.956 206.758 1.00 16.87 O
ATOM 20 N1 G B2808 -14.885 87.683 207.020 1.00 16.87 N
ATOM 21 C2 G B2808 -13.525 87.530 207.201 1.00 16.87 C
ATOM 22 N2 G B2808 -13.076 86.277 207.273 1.00 16.87 N
ATOM 23 N3 G B2808 -12.639 88.511 207.309 1.00 16.87 N
ATOM 24 C4 G B2808 -13.239 89.704 207.211 1.00 16.87 C
ATOM 25 P U B2809 -9.007 91.507 203.510 1.00 4.04 P
ATOM 26 OP1 U B2809 -7.625 91.522 202.972 1.00 4.04 O
ATOM 27 OP2 U B2809 -10.087 92.167 202.727 1.00 4.04 O
ATOM 28 O5' U B2809 -9.453 90.024 203.887 1.00 4.04 O
TER
Atoms:
OP1: (-5.336,90.015,208.920)
OP2: (-3.683,89.065,210.622)
C3': (-8.962,87.396,209.886)
C1': (-8.922,86.402,207.748)
C5': (-6.437,87.460,210.088)
O4': (-7.614,86.835,208.065)
C8: (-8.089,84.210,208.596)
O2': (-10.338,88.296,208.097)
C6: (-10.416,81.720,207.679)
C5: (-9.588,82.825,207.959)
C4: (-9.966,84.064,207.514)
P: (-4.432,88.916,209.353)
C4': (-7.642,87.709,209.226)
C2': (-9.879,87.104,208.705)
C2: (-11.803,83.202,206.603)
N1: (-11.547,81.946,206.977)
N3: (-11.085,84.309,206.820)
N6: (-10.153,80.469,208.054)
N7: (-8.403,82.943,208.641)
N9: (-8.985,84.947,207.916)
O5': (-5.234,87.562,209.359)
O3': (-9.407,88.435,210.729)
OP2: (-3.683,89.065,210.622)
C3': (-8.962,87.396,209.886)
C1': (-8.922,86.402,207.748)
C5': (-6.437,87.460,210.088)
O4': (-7.614,86.835,208.065)
C8: (-8.089,84.210,208.596)
O2': (-10.338,88.296,208.097)
C6: (-10.416,81.720,207.679)
C5: (-9.588,82.825,207.959)
C4: (-9.966,84.064,207.514)
P: (-4.432,88.916,209.353)
C4': (-7.642,87.709,209.226)
C2': (-9.879,87.104,208.705)
C2: (-11.803,83.202,206.603)
N1: (-11.547,81.946,206.977)
N3: (-11.085,84.309,206.820)
N6: (-10.153,80.469,208.054)
N7: (-8.403,82.943,208.641)
N9: (-8.985,84.947,207.916)
O5': (-5.234,87.562,209.359)
O3': (-9.407,88.435,210.729)
OP1: (-11.302,96.948,205.152)
OP2: (-13.622,95.936,205.476)
C3': (-10.104,92.137,205.726)
C1': (-11.184,91.100,207.528)
C5': (-10.331,94.464,206.706)
O6: (-16.758,88.956,206.758)
O4': (-10.979,92.456,207.853)
C8: (-13.553,91.872,207.174)
C2: (-13.525,87.530,207.201)
C6: (-15.526,88.916,206.925)
C5: (-14.578,89.993,207.036)
C4: (-13.239,89.704,207.211)
P: (-12.208,96.061,205.918)
C4': (-10.017,93.025,206.941)
C2': (-10.313,90.768,206.325)
O2': (-9.075,90.246,206.794)
N1: (-14.885,87.683,207.020)
N2: (-13.076,86.277,207.273)
N3: (-12.639,88.511,207.309)
N7: (-14.749,91.377,207.018)
N9: (-12.606,90.900,207.271)
O5': (-11.572,94.623,206.058)
O3': (-8.965,92.211,204.923)
OP2: (-13.622,95.936,205.476)
C3': (-10.104,92.137,205.726)
C1': (-11.184,91.100,207.528)
C5': (-10.331,94.464,206.706)
O6: (-16.758,88.956,206.758)
O4': (-10.979,92.456,207.853)
C8: (-13.553,91.872,207.174)
C2: (-13.525,87.530,207.201)
C6: (-15.526,88.916,206.925)
C5: (-14.578,89.993,207.036)
C4: (-13.239,89.704,207.211)
P: (-12.208,96.061,205.918)
C4': (-10.017,93.025,206.941)
C2': (-10.313,90.768,206.325)
O2': (-9.075,90.246,206.794)
N1: (-14.885,87.683,207.020)
N2: (-13.076,86.277,207.273)
N3: (-12.639,88.511,207.309)
N7: (-14.749,91.377,207.018)
N9: (-12.606,90.900,207.271)
O5': (-11.572,94.623,206.058)
O3': (-8.965,92.211,204.923)
Image (generated by PyMOL):