Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E23:E10
Extra
PDB:
ATOM 1 O3' A A 22 -4.291 16.550 105.466 1.00 78.90 O
ATOM 2 P A A 23 -2.926 17.240 104.969 1.00 78.90 P
ATOM 3 OP1 A A 23 -2.997 17.419 103.497 1.00 82.07 O
ATOM 4 OP2 A A 23 -1.789 16.494 105.563 1.00 80.10 O
ATOM 5 O5' A A 23 -2.967 18.681 105.636 1.00 76.00 O
ATOM 6 C5' A A 23 -4.013 19.588 105.325 1.00 69.04 C
ATOM 7 C4' A A 23 -3.949 20.777 106.240 1.00 67.33 C
ATOM 8 O4' A A 23 -4.164 20.333 107.604 1.00 71.19 O
ATOM 9 C3' A A 23 -2.602 21.474 106.289 1.00 65.39 C
ATOM 10 O3' A A 23 -2.475 22.410 105.227 1.00 65.15 O
ATOM 11 C2' A A 23 -2.665 22.167 107.639 1.00 65.39 C
ATOM 12 O2' A A 23 -3.461 23.330 107.583 1.00 66.27 O
ATOM 13 C1' A A 23 -3.365 21.103 108.485 1.00 73.93 C
ATOM 14 N9 A A 23 -2.433 20.200 109.160 1.00 77.81 N
ATOM 15 C8 A A 23 -2.139 18.900 108.833 1.00 78.15 C
ATOM 16 N7 A A 23 -1.256 18.342 109.626 1.00 77.73 N
ATOM 17 C5 A A 23 -0.948 19.342 110.536 1.00 77.85 C
ATOM 18 C6 A A 23 -0.073 19.383 111.634 1.00 78.68 C
ATOM 19 N6 A A 23 0.682 18.352 112.018 1.00 79.07 N
ATOM 20 N1 A A 23 0.001 20.535 112.336 1.00 78.45 N
ATOM 21 C2 A A 23 -0.756 21.566 111.951 1.00 76.42 C
ATOM 22 N3 A A 23 -1.615 21.650 110.940 1.00 77.20 N
ATOM 23 C4 A A 23 -1.665 20.491 110.263 1.00 77.65 C
ATOM 24 P C A 24 -1.024 22.715 104.602 1.00 74.64 P
ATOM 25 OP1 C A 24 -1.176 23.799 103.597 1.00 71.11 O
ATOM 26 OP2 C A 24 -0.402 21.425 104.202 1.00 59.95 O
ATOM 27 O5' C A 24 -0.195 23.292 105.830 1.00 65.87 O
TER
ATOM 1 O3' A B 9 0.276 30.280 109.463 1.00 82.50 O
ATOM 2 P G B 10 -1.295 30.438 109.771 1.00 85.37 P
ATOM 3 OP1 G B 10 -1.946 30.986 108.554 1.00 90.15 O
ATOM 4 OP2 G B 10 -1.445 31.148 111.069 1.00 81.90 O
ATOM 5 O5' G B 10 -1.805 28.945 109.976 1.00 79.00 O
ATOM 6 C5' G B 10 -1.776 28.010 108.906 1.00 70.18 C
ATOM 7 C4' G B 10 -2.005 26.617 109.435 1.00 71.03 C
ATOM 8 O4' G B 10 -0.957 26.296 110.389 1.00 64.24 O
ATOM 9 C3' G B 10 -3.291 26.422 110.222 1.00 72.66 C
ATOM 10 O3' G B 10 -4.381 26.153 109.346 1.00 71.29 O
ATOM 11 C2' G B 10 -2.951 25.210 111.078 1.00 71.54 C
ATOM 12 O2' G B 10 -3.032 24.001 110.352 1.00 77.98 O
ATOM 13 C1' G B 10 -1.488 25.489 111.425 1.00 66.35 C
ATOM 14 N9 G B 10 -1.313 26.195 112.690 1.00 64.84 N
ATOM 15 C8 G B 10 -1.122 27.543 112.870 1.00 67.32 C
ATOM 16 N7 G B 10 -0.981 27.877 114.124 1.00 66.94 N
ATOM 17 C5 G B 10 -1.090 26.677 114.813 1.00 63.29 C
ATOM 18 C6 G B 10 -1.017 26.405 116.205 1.00 62.95 C
ATOM 19 O6 G B 10 -0.839 27.198 117.139 1.00 68.87 O
ATOM 20 N1 G B 10 -1.177 25.049 116.469 1.00 60.97 N
ATOM 21 C2 G B 10 -1.381 24.080 115.517 1.00 62.91 C
ATOM 22 N2 G B 10 -1.515 22.826 115.964 1.00 59.82 N
ATOM 23 N3 G B 10 -1.451 24.322 114.218 1.00 61.59 N
ATOM 24 C4 G B 10 -1.298 25.631 113.941 1.00 62.25 C
ATOM 25 P U B 11 -5.878 26.526 109.794 1.00 69.08 P
ATOM 26 OP1 U B 11 -6.735 26.440 108.586 1.00 72.60 O
ATOM 27 OP2 U B 11 -5.819 27.793 110.565 1.00 76.33 O
ATOM 28 O5' U B 11 -6.295 25.351 110.786 1.00 63.86 O
TER
ATOM 2 P A A 23 -2.926 17.240 104.969 1.00 78.90 P
ATOM 3 OP1 A A 23 -2.997 17.419 103.497 1.00 82.07 O
ATOM 4 OP2 A A 23 -1.789 16.494 105.563 1.00 80.10 O
ATOM 5 O5' A A 23 -2.967 18.681 105.636 1.00 76.00 O
ATOM 6 C5' A A 23 -4.013 19.588 105.325 1.00 69.04 C
ATOM 7 C4' A A 23 -3.949 20.777 106.240 1.00 67.33 C
ATOM 8 O4' A A 23 -4.164 20.333 107.604 1.00 71.19 O
ATOM 9 C3' A A 23 -2.602 21.474 106.289 1.00 65.39 C
ATOM 10 O3' A A 23 -2.475 22.410 105.227 1.00 65.15 O
ATOM 11 C2' A A 23 -2.665 22.167 107.639 1.00 65.39 C
ATOM 12 O2' A A 23 -3.461 23.330 107.583 1.00 66.27 O
ATOM 13 C1' A A 23 -3.365 21.103 108.485 1.00 73.93 C
ATOM 14 N9 A A 23 -2.433 20.200 109.160 1.00 77.81 N
ATOM 15 C8 A A 23 -2.139 18.900 108.833 1.00 78.15 C
ATOM 16 N7 A A 23 -1.256 18.342 109.626 1.00 77.73 N
ATOM 17 C5 A A 23 -0.948 19.342 110.536 1.00 77.85 C
ATOM 18 C6 A A 23 -0.073 19.383 111.634 1.00 78.68 C
ATOM 19 N6 A A 23 0.682 18.352 112.018 1.00 79.07 N
ATOM 20 N1 A A 23 0.001 20.535 112.336 1.00 78.45 N
ATOM 21 C2 A A 23 -0.756 21.566 111.951 1.00 76.42 C
ATOM 22 N3 A A 23 -1.615 21.650 110.940 1.00 77.20 N
ATOM 23 C4 A A 23 -1.665 20.491 110.263 1.00 77.65 C
ATOM 24 P C A 24 -1.024 22.715 104.602 1.00 74.64 P
ATOM 25 OP1 C A 24 -1.176 23.799 103.597 1.00 71.11 O
ATOM 26 OP2 C A 24 -0.402 21.425 104.202 1.00 59.95 O
ATOM 27 O5' C A 24 -0.195 23.292 105.830 1.00 65.87 O
TER
ATOM 1 O3' A B 9 0.276 30.280 109.463 1.00 82.50 O
ATOM 2 P G B 10 -1.295 30.438 109.771 1.00 85.37 P
ATOM 3 OP1 G B 10 -1.946 30.986 108.554 1.00 90.15 O
ATOM 4 OP2 G B 10 -1.445 31.148 111.069 1.00 81.90 O
ATOM 5 O5' G B 10 -1.805 28.945 109.976 1.00 79.00 O
ATOM 6 C5' G B 10 -1.776 28.010 108.906 1.00 70.18 C
ATOM 7 C4' G B 10 -2.005 26.617 109.435 1.00 71.03 C
ATOM 8 O4' G B 10 -0.957 26.296 110.389 1.00 64.24 O
ATOM 9 C3' G B 10 -3.291 26.422 110.222 1.00 72.66 C
ATOM 10 O3' G B 10 -4.381 26.153 109.346 1.00 71.29 O
ATOM 11 C2' G B 10 -2.951 25.210 111.078 1.00 71.54 C
ATOM 12 O2' G B 10 -3.032 24.001 110.352 1.00 77.98 O
ATOM 13 C1' G B 10 -1.488 25.489 111.425 1.00 66.35 C
ATOM 14 N9 G B 10 -1.313 26.195 112.690 1.00 64.84 N
ATOM 15 C8 G B 10 -1.122 27.543 112.870 1.00 67.32 C
ATOM 16 N7 G B 10 -0.981 27.877 114.124 1.00 66.94 N
ATOM 17 C5 G B 10 -1.090 26.677 114.813 1.00 63.29 C
ATOM 18 C6 G B 10 -1.017 26.405 116.205 1.00 62.95 C
ATOM 19 O6 G B 10 -0.839 27.198 117.139 1.00 68.87 O
ATOM 20 N1 G B 10 -1.177 25.049 116.469 1.00 60.97 N
ATOM 21 C2 G B 10 -1.381 24.080 115.517 1.00 62.91 C
ATOM 22 N2 G B 10 -1.515 22.826 115.964 1.00 59.82 N
ATOM 23 N3 G B 10 -1.451 24.322 114.218 1.00 61.59 N
ATOM 24 C4 G B 10 -1.298 25.631 113.941 1.00 62.25 C
ATOM 25 P U B 11 -5.878 26.526 109.794 1.00 69.08 P
ATOM 26 OP1 U B 11 -6.735 26.440 108.586 1.00 72.60 O
ATOM 27 OP2 U B 11 -5.819 27.793 110.565 1.00 76.33 O
ATOM 28 O5' U B 11 -6.295 25.351 110.786 1.00 63.86 O
TER
Atoms:
OP1: (-2.997,17.419,103.497)
OP2: (-1.789,16.494,105.563)
C3': (-2.602,21.474,106.289)
C1': (-3.365,21.103,108.485)
C5': (-4.013,19.588,105.325)
O4': (-4.164,20.333,107.604)
C8: (-2.139,18.900,108.833)
O2': (-3.461,23.330,107.583)
C6: (-0.073,19.383,111.634)
C5: (-0.948,19.342,110.536)
C4: (-1.665,20.491,110.263)
P: (-2.926,17.240,104.969)
C4': (-3.949,20.777,106.240)
C2': (-2.665,22.167,107.639)
C2: (-0.756,21.566,111.951)
N1: (0.001,20.535,112.336)
N3: (-1.615,21.650,110.940)
N6: (0.682,18.352,112.018)
N7: (-1.256,18.342,109.626)
N9: (-2.433,20.200,109.160)
O5': (-2.967,18.681,105.636)
O3': (-2.475,22.410,105.227)
OP2: (-1.789,16.494,105.563)
C3': (-2.602,21.474,106.289)
C1': (-3.365,21.103,108.485)
C5': (-4.013,19.588,105.325)
O4': (-4.164,20.333,107.604)
C8: (-2.139,18.900,108.833)
O2': (-3.461,23.330,107.583)
C6: (-0.073,19.383,111.634)
C5: (-0.948,19.342,110.536)
C4: (-1.665,20.491,110.263)
P: (-2.926,17.240,104.969)
C4': (-3.949,20.777,106.240)
C2': (-2.665,22.167,107.639)
C2: (-0.756,21.566,111.951)
N1: (0.001,20.535,112.336)
N3: (-1.615,21.650,110.940)
N6: (0.682,18.352,112.018)
N7: (-1.256,18.342,109.626)
N9: (-2.433,20.200,109.160)
O5': (-2.967,18.681,105.636)
O3': (-2.475,22.410,105.227)
OP1: (-1.946,30.986,108.554)
OP2: (-1.445,31.148,111.069)
C3': (-3.291,26.422,110.222)
C1': (-1.488,25.489,111.425)
C5': (-1.776,28.010,108.906)
O6: (-0.839,27.198,117.139)
O4': (-0.957,26.296,110.389)
C8: (-1.122,27.543,112.870)
C2: (-1.381,24.080,115.517)
C6: (-1.017,26.405,116.205)
C5: (-1.090,26.677,114.813)
C4: (-1.298,25.631,113.941)
P: (-1.295,30.438,109.771)
C4': (-2.005,26.617,109.435)
C2': (-2.951,25.210,111.078)
O2': (-3.032,24.001,110.352)
N1: (-1.177,25.049,116.469)
N2: (-1.515,22.826,115.964)
N3: (-1.451,24.322,114.218)
N7: (-0.981,27.877,114.124)
N9: (-1.313,26.195,112.690)
O5': (-1.805,28.945,109.976)
O3': (-4.381,26.153,109.346)
OP2: (-1.445,31.148,111.069)
C3': (-3.291,26.422,110.222)
C1': (-1.488,25.489,111.425)
C5': (-1.776,28.010,108.906)
O6: (-0.839,27.198,117.139)
O4': (-0.957,26.296,110.389)
C8: (-1.122,27.543,112.870)
C2: (-1.381,24.080,115.517)
C6: (-1.017,26.405,116.205)
C5: (-1.090,26.677,114.813)
C4: (-1.298,25.631,113.941)
P: (-1.295,30.438,109.771)
C4': (-2.005,26.617,109.435)
C2': (-2.951,25.210,111.078)
O2': (-3.032,24.001,110.352)
N1: (-1.177,25.049,116.469)
N2: (-1.515,22.826,115.964)
N3: (-1.451,24.322,114.218)
N7: (-0.981,27.877,114.124)
N9: (-1.313,26.195,112.690)
O5': (-1.805,28.945,109.976)
O3': (-4.381,26.153,109.346)
Image (generated by PyMOL):