Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2025:A2439
Extra
PDB:
ATOM 1 O3' A A2024 -44.432 121.314 185.345 1.00 41.70 O
ATOM 2 P A A2025 -44.684 119.959 186.145 1.00 64.97 P
ATOM 3 OP1 A A2025 -46.076 119.507 185.939 1.00 73.08 O
ATOM 4 OP2 A A2025 -44.147 120.123 187.509 1.00 69.41 O
ATOM 5 O5' A A2025 -43.736 118.989 185.322 1.00 80.23 O
ATOM 6 C5' A A2025 -43.729 119.162 183.928 1.00 75.21 C
ATOM 7 C4' A A2025 -44.997 118.574 183.358 1.00 56.49 C
ATOM 8 O4' A A2025 -46.090 119.509 183.419 1.00 56.77 O
ATOM 9 C3' A A2025 -44.831 118.258 181.896 1.00 59.27 C
ATOM 10 O3' A A2025 -44.432 116.903 181.900 1.00 61.98 O
ATOM 11 C2' A A2025 -46.221 118.485 181.298 1.00 67.99 C
ATOM 12 O2' A A2025 -46.855 117.270 180.958 1.00 88.04 O
ATOM 13 C1' A A2025 -47.021 119.150 182.417 1.00 63.35 C
ATOM 14 N9 A A2025 -47.821 120.320 182.025 1.00 56.11 N
ATOM 15 C8 A A2025 -48.028 121.437 182.780 1.00 70.29 C
ATOM 16 N7 A A2025 -48.789 122.343 182.214 1.00 69.72 N
ATOM 17 C5 A A2025 -49.111 121.781 180.996 1.00 61.95 C
ATOM 18 C6 A A2025 -49.894 122.251 179.926 1.00 64.03 C
ATOM 19 N6 A A2025 -50.502 123.436 179.942 1.00 58.75 N
ATOM 20 N1 A A2025 -50.029 121.465 178.842 1.00 61.17 N
ATOM 21 C2 A A2025 -49.407 120.281 178.854 1.00 67.84 C
ATOM 22 N3 A A2025 -48.645 119.731 179.803 1.00 62.47 N
ATOM 23 C4 A A2025 -48.529 120.539 180.862 1.00 52.81 C
ATOM 24 P G A2026 -42.941 116.528 181.464 1.00 38.50 P
ATOM 25 OP1 G A2026 -42.413 117.716 180.736 1.00 42.81 O
ATOM 26 OP2 G A2026 -43.033 115.212 180.791 1.00 51.42 O
ATOM 27 O5' G A2026 -42.127 116.293 182.823 1.00 42.16 O
TER
ATOM 1 O3' G B2438 -43.708 112.412 177.102 1.00 47.66 O
ATOM 2 P G B2439 -45.274 112.079 177.016 1.00 39.41 P
ATOM 3 OP1 G B2439 -45.560 111.021 178.033 1.00 39.33 O
ATOM 4 OP2 G B2439 -45.574 111.898 175.572 1.00 41.91 O
ATOM 5 O5' G B2439 -45.986 113.427 177.515 1.00 40.79 O
ATOM 6 C5' G B2439 -45.992 113.752 178.913 1.00 41.62 C
ATOM 7 C4' G B2439 -46.794 115.019 179.113 1.00 45.99 C
ATOM 8 O4' G B2439 -46.234 116.061 178.282 1.00 48.33 O
ATOM 9 C3' G B2439 -48.250 114.937 178.676 1.00 56.25 C
ATOM 10 O3' G B2439 -49.044 114.475 179.761 1.00 52.37 O
ATOM 11 C2' G B2439 -48.586 116.385 178.356 1.00 51.01 C
ATOM 12 O2' G B2439 -48.972 117.077 179.521 1.00 49.92 O
ATOM 13 C1' G B2439 -47.262 116.923 177.834 1.00 48.20 C
ATOM 14 N9 G B2439 -47.215 116.925 176.386 1.00 47.41 N
ATOM 15 C8 G B2439 -46.498 116.067 175.596 1.00 47.22 C
ATOM 16 N7 G B2439 -46.658 116.312 174.332 1.00 47.10 N
ATOM 17 C5 G B2439 -47.529 117.388 174.289 1.00 41.25 C
ATOM 18 C6 G B2439 -48.061 118.081 173.184 1.00 49.47 C
ATOM 19 O6 G B2439 -47.848 117.869 171.982 1.00 60.11 O
ATOM 20 N1 G B2439 -48.915 119.110 173.577 1.00 48.32 N
ATOM 21 C2 G B2439 -49.207 119.429 174.879 1.00 50.90 C
ATOM 22 N2 G B2439 -50.049 120.456 175.066 1.00 50.62 N
ATOM 23 N3 G B2439 -48.710 118.781 175.923 1.00 52.88 N
ATOM 24 C4 G B2439 -47.883 117.778 175.549 1.00 43.92 C
ATOM 25 P C B2440 -50.185 113.384 179.470 1.00 48.74 P
ATOM 26 OP1 C B2440 -50.502 112.726 180.766 1.00 35.83 O
ATOM 27 OP2 C B2440 -49.804 112.573 178.287 1.00 45.23 O
ATOM 28 O5' C B2440 -51.395 114.313 178.996 1.00 56.38 O
TER
ATOM 2 P A A2025 -44.684 119.959 186.145 1.00 64.97 P
ATOM 3 OP1 A A2025 -46.076 119.507 185.939 1.00 73.08 O
ATOM 4 OP2 A A2025 -44.147 120.123 187.509 1.00 69.41 O
ATOM 5 O5' A A2025 -43.736 118.989 185.322 1.00 80.23 O
ATOM 6 C5' A A2025 -43.729 119.162 183.928 1.00 75.21 C
ATOM 7 C4' A A2025 -44.997 118.574 183.358 1.00 56.49 C
ATOM 8 O4' A A2025 -46.090 119.509 183.419 1.00 56.77 O
ATOM 9 C3' A A2025 -44.831 118.258 181.896 1.00 59.27 C
ATOM 10 O3' A A2025 -44.432 116.903 181.900 1.00 61.98 O
ATOM 11 C2' A A2025 -46.221 118.485 181.298 1.00 67.99 C
ATOM 12 O2' A A2025 -46.855 117.270 180.958 1.00 88.04 O
ATOM 13 C1' A A2025 -47.021 119.150 182.417 1.00 63.35 C
ATOM 14 N9 A A2025 -47.821 120.320 182.025 1.00 56.11 N
ATOM 15 C8 A A2025 -48.028 121.437 182.780 1.00 70.29 C
ATOM 16 N7 A A2025 -48.789 122.343 182.214 1.00 69.72 N
ATOM 17 C5 A A2025 -49.111 121.781 180.996 1.00 61.95 C
ATOM 18 C6 A A2025 -49.894 122.251 179.926 1.00 64.03 C
ATOM 19 N6 A A2025 -50.502 123.436 179.942 1.00 58.75 N
ATOM 20 N1 A A2025 -50.029 121.465 178.842 1.00 61.17 N
ATOM 21 C2 A A2025 -49.407 120.281 178.854 1.00 67.84 C
ATOM 22 N3 A A2025 -48.645 119.731 179.803 1.00 62.47 N
ATOM 23 C4 A A2025 -48.529 120.539 180.862 1.00 52.81 C
ATOM 24 P G A2026 -42.941 116.528 181.464 1.00 38.50 P
ATOM 25 OP1 G A2026 -42.413 117.716 180.736 1.00 42.81 O
ATOM 26 OP2 G A2026 -43.033 115.212 180.791 1.00 51.42 O
ATOM 27 O5' G A2026 -42.127 116.293 182.823 1.00 42.16 O
TER
ATOM 1 O3' G B2438 -43.708 112.412 177.102 1.00 47.66 O
ATOM 2 P G B2439 -45.274 112.079 177.016 1.00 39.41 P
ATOM 3 OP1 G B2439 -45.560 111.021 178.033 1.00 39.33 O
ATOM 4 OP2 G B2439 -45.574 111.898 175.572 1.00 41.91 O
ATOM 5 O5' G B2439 -45.986 113.427 177.515 1.00 40.79 O
ATOM 6 C5' G B2439 -45.992 113.752 178.913 1.00 41.62 C
ATOM 7 C4' G B2439 -46.794 115.019 179.113 1.00 45.99 C
ATOM 8 O4' G B2439 -46.234 116.061 178.282 1.00 48.33 O
ATOM 9 C3' G B2439 -48.250 114.937 178.676 1.00 56.25 C
ATOM 10 O3' G B2439 -49.044 114.475 179.761 1.00 52.37 O
ATOM 11 C2' G B2439 -48.586 116.385 178.356 1.00 51.01 C
ATOM 12 O2' G B2439 -48.972 117.077 179.521 1.00 49.92 O
ATOM 13 C1' G B2439 -47.262 116.923 177.834 1.00 48.20 C
ATOM 14 N9 G B2439 -47.215 116.925 176.386 1.00 47.41 N
ATOM 15 C8 G B2439 -46.498 116.067 175.596 1.00 47.22 C
ATOM 16 N7 G B2439 -46.658 116.312 174.332 1.00 47.10 N
ATOM 17 C5 G B2439 -47.529 117.388 174.289 1.00 41.25 C
ATOM 18 C6 G B2439 -48.061 118.081 173.184 1.00 49.47 C
ATOM 19 O6 G B2439 -47.848 117.869 171.982 1.00 60.11 O
ATOM 20 N1 G B2439 -48.915 119.110 173.577 1.00 48.32 N
ATOM 21 C2 G B2439 -49.207 119.429 174.879 1.00 50.90 C
ATOM 22 N2 G B2439 -50.049 120.456 175.066 1.00 50.62 N
ATOM 23 N3 G B2439 -48.710 118.781 175.923 1.00 52.88 N
ATOM 24 C4 G B2439 -47.883 117.778 175.549 1.00 43.92 C
ATOM 25 P C B2440 -50.185 113.384 179.470 1.00 48.74 P
ATOM 26 OP1 C B2440 -50.502 112.726 180.766 1.00 35.83 O
ATOM 27 OP2 C B2440 -49.804 112.573 178.287 1.00 45.23 O
ATOM 28 O5' C B2440 -51.395 114.313 178.996 1.00 56.38 O
TER
Atoms:
OP1: (-46.076,119.507,185.939)
OP2: (-44.147,120.123,187.509)
C3': (-44.831,118.258,181.896)
C1': (-47.021,119.150,182.417)
C5': (-43.729,119.162,183.928)
O4': (-46.090,119.509,183.419)
C8: (-48.028,121.437,182.780)
O2': (-46.855,117.270,180.958)
C6: (-49.894,122.251,179.926)
C5: (-49.111,121.781,180.996)
C4: (-48.529,120.539,180.862)
P: (-44.684,119.959,186.145)
C4': (-44.997,118.574,183.358)
C2': (-46.221,118.485,181.298)
C2: (-49.407,120.281,178.854)
N1: (-50.029,121.465,178.842)
N3: (-48.645,119.731,179.803)
N6: (-50.502,123.436,179.942)
N7: (-48.789,122.343,182.214)
N9: (-47.821,120.320,182.025)
O5': (-43.736,118.989,185.322)
O3': (-44.432,116.903,181.900)
OP2: (-44.147,120.123,187.509)
C3': (-44.831,118.258,181.896)
C1': (-47.021,119.150,182.417)
C5': (-43.729,119.162,183.928)
O4': (-46.090,119.509,183.419)
C8: (-48.028,121.437,182.780)
O2': (-46.855,117.270,180.958)
C6: (-49.894,122.251,179.926)
C5: (-49.111,121.781,180.996)
C4: (-48.529,120.539,180.862)
P: (-44.684,119.959,186.145)
C4': (-44.997,118.574,183.358)
C2': (-46.221,118.485,181.298)
C2: (-49.407,120.281,178.854)
N1: (-50.029,121.465,178.842)
N3: (-48.645,119.731,179.803)
N6: (-50.502,123.436,179.942)
N7: (-48.789,122.343,182.214)
N9: (-47.821,120.320,182.025)
O5': (-43.736,118.989,185.322)
O3': (-44.432,116.903,181.900)
OP1: (-45.560,111.021,178.033)
OP2: (-45.574,111.898,175.572)
C3': (-48.250,114.937,178.676)
C1': (-47.262,116.923,177.834)
C5': (-45.992,113.752,178.913)
O6: (-47.848,117.869,171.982)
O4': (-46.234,116.061,178.282)
C8: (-46.498,116.067,175.596)
C2: (-49.207,119.429,174.879)
C6: (-48.061,118.081,173.184)
C5: (-47.529,117.388,174.289)
C4: (-47.883,117.778,175.549)
P: (-45.274,112.079,177.016)
C4': (-46.794,115.019,179.113)
C2': (-48.586,116.385,178.356)
O2': (-48.972,117.077,179.521)
N1: (-48.915,119.110,173.577)
N2: (-50.049,120.456,175.066)
N3: (-48.710,118.781,175.923)
N7: (-46.658,116.312,174.332)
N9: (-47.215,116.925,176.386)
O5': (-45.986,113.427,177.515)
O3': (-49.044,114.475,179.761)
OP2: (-45.574,111.898,175.572)
C3': (-48.250,114.937,178.676)
C1': (-47.262,116.923,177.834)
C5': (-45.992,113.752,178.913)
O6: (-47.848,117.869,171.982)
O4': (-46.234,116.061,178.282)
C8: (-46.498,116.067,175.596)
C2: (-49.207,119.429,174.879)
C6: (-48.061,118.081,173.184)
C5: (-47.529,117.388,174.289)
C4: (-47.883,117.778,175.549)
P: (-45.274,112.079,177.016)
C4': (-46.794,115.019,179.113)
C2': (-48.586,116.385,178.356)
O2': (-48.972,117.077,179.521)
N1: (-48.915,119.110,173.577)
N2: (-50.049,120.456,175.066)
N3: (-48.710,118.781,175.923)
N7: (-46.658,116.312,174.332)
N9: (-47.215,116.925,176.386)
O5': (-45.986,113.427,177.515)
O3': (-49.044,114.475,179.761)
Image (generated by PyMOL):