Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02331:02018
Extra
PDB:
ATOM 1 O3' G A2330 56.919 114.740 110.863 1.00 35.06 O
ATOM 2 P A A2331 56.851 113.603 111.996 1.00 37.95 P
ATOM 3 OP1 A A2331 55.844 114.036 113.011 1.00 36.16 O
ATOM 4 OP2 A A2331 58.233 113.278 112.430 1.00 38.23 O
ATOM 5 O5' A A2331 56.297 112.329 111.217 1.00 35.91 O
ATOM 6 C5' A A2331 54.951 112.288 110.735 1.00 34.13 C
ATOM 7 C4' A A2331 54.733 111.036 109.933 1.00 35.66 C
ATOM 8 O4' A A2331 55.587 111.050 108.760 1.00 35.80 O
ATOM 9 C3' A A2331 55.110 109.750 110.643 1.00 36.44 C
ATOM 10 O3' A A2331 54.071 109.316 111.503 1.00 35.39 O
ATOM 11 C2' A A2331 55.339 108.794 109.483 1.00 37.17 C
ATOM 12 O2' A A2331 54.132 108.276 108.952 1.00 40.79 O
ATOM 13 C1' A A2331 56.006 109.723 108.465 1.00 36.22 C
ATOM 14 N9 A A2331 57.466 109.668 108.533 1.00 34.41 N
ATOM 15 C8 A A2331 58.336 110.586 109.066 1.00 34.46 C
ATOM 16 N7 A A2331 59.594 110.235 108.975 1.00 34.36 N
ATOM 17 C5 A A2331 59.551 109.006 108.336 1.00 34.49 C
ATOM 18 C6 A A2331 60.557 108.116 107.931 1.00 35.32 C
ATOM 19 N6 A A2331 61.860 108.339 108.107 1.00 37.02 N
ATOM 20 N1 A A2331 60.174 106.973 107.322 1.00 35.43 N
ATOM 21 C2 A A2331 58.872 106.757 107.129 1.00 35.19 C
ATOM 22 N3 A A2331 57.835 107.521 107.453 1.00 34.99 N
ATOM 23 C4 A A2331 58.247 108.644 108.060 1.00 34.68 C
ATOM 24 P G A2332 54.437 108.619 112.893 1.00 33.68 P
ATOM 25 OP1 G A2332 53.200 108.632 113.699 1.00 31.85 O
ATOM 26 OP2 G A2332 55.660 109.265 113.416 1.00 34.09 O
ATOM 27 O5' G A2332 54.826 107.128 112.484 1.00 33.21 O
TER
ATOM 1 O3' C B2017 48.812 110.864 103.208 1.00 37.93 O
ATOM 2 P G B2018 48.007 111.342 104.520 1.00 39.53 P
ATOM 3 OP1 G B2018 47.260 110.204 105.120 1.00 40.77 O
ATOM 4 OP2 G B2018 47.291 112.601 104.206 1.00 39.65 O
ATOM 5 O5' G B2018 49.200 111.736 105.484 1.00 38.28 O
ATOM 6 C5' G B2018 49.114 111.606 106.900 1.00 38.49 C
ATOM 7 C4' G B2018 50.496 111.396 107.450 1.00 40.05 C
ATOM 8 O4' G B2018 50.806 109.980 107.429 1.00 40.05 O
ATOM 9 C3' G B2018 51.589 112.088 106.639 1.00 41.20 C
ATOM 10 O3' G B2018 52.633 112.530 107.484 1.00 43.62 O
ATOM 11 C2' G B2018 52.071 110.972 105.717 1.00 40.95 C
ATOM 12 O2' G B2018 53.396 111.149 105.268 1.00 40.46 O
ATOM 13 C1' G B2018 51.944 109.750 106.624 1.00 39.76 C
ATOM 14 N9 G B2018 51.725 108.502 105.897 1.00 39.32 N
ATOM 15 C8 G B2018 50.628 108.164 105.139 1.00 37.67 C
ATOM 16 N7 G B2018 50.713 106.971 104.618 1.00 37.48 N
ATOM 17 C5 G B2018 51.940 106.491 105.055 1.00 37.92 C
ATOM 18 C6 G B2018 52.571 105.242 104.827 1.00 38.46 C
ATOM 19 O6 G B2018 52.161 104.278 104.167 1.00 39.99 O
ATOM 20 N1 G B2018 53.804 105.171 105.467 1.00 38.00 N
ATOM 21 C2 G B2018 54.355 106.165 106.234 1.00 36.50 C
ATOM 22 N2 G B2018 55.553 105.905 106.767 1.00 34.18 N
ATOM 23 N3 G B2018 53.774 107.327 106.461 1.00 36.31 N
ATOM 24 C4 G B2018 52.579 107.423 105.844 1.00 37.81 C
ATOM 25 P G B2019 52.988 114.095 107.558 1.00 43.10 P
ATOM 26 OP1 G B2019 53.471 114.547 106.228 1.00 41.47 O
ATOM 27 OP2 G B2019 53.838 114.287 108.754 1.00 46.28 O
ATOM 28 O5' G B2019 51.609 114.815 107.893 1.00 40.74 O
TER
ATOM 2 P A A2331 56.851 113.603 111.996 1.00 37.95 P
ATOM 3 OP1 A A2331 55.844 114.036 113.011 1.00 36.16 O
ATOM 4 OP2 A A2331 58.233 113.278 112.430 1.00 38.23 O
ATOM 5 O5' A A2331 56.297 112.329 111.217 1.00 35.91 O
ATOM 6 C5' A A2331 54.951 112.288 110.735 1.00 34.13 C
ATOM 7 C4' A A2331 54.733 111.036 109.933 1.00 35.66 C
ATOM 8 O4' A A2331 55.587 111.050 108.760 1.00 35.80 O
ATOM 9 C3' A A2331 55.110 109.750 110.643 1.00 36.44 C
ATOM 10 O3' A A2331 54.071 109.316 111.503 1.00 35.39 O
ATOM 11 C2' A A2331 55.339 108.794 109.483 1.00 37.17 C
ATOM 12 O2' A A2331 54.132 108.276 108.952 1.00 40.79 O
ATOM 13 C1' A A2331 56.006 109.723 108.465 1.00 36.22 C
ATOM 14 N9 A A2331 57.466 109.668 108.533 1.00 34.41 N
ATOM 15 C8 A A2331 58.336 110.586 109.066 1.00 34.46 C
ATOM 16 N7 A A2331 59.594 110.235 108.975 1.00 34.36 N
ATOM 17 C5 A A2331 59.551 109.006 108.336 1.00 34.49 C
ATOM 18 C6 A A2331 60.557 108.116 107.931 1.00 35.32 C
ATOM 19 N6 A A2331 61.860 108.339 108.107 1.00 37.02 N
ATOM 20 N1 A A2331 60.174 106.973 107.322 1.00 35.43 N
ATOM 21 C2 A A2331 58.872 106.757 107.129 1.00 35.19 C
ATOM 22 N3 A A2331 57.835 107.521 107.453 1.00 34.99 N
ATOM 23 C4 A A2331 58.247 108.644 108.060 1.00 34.68 C
ATOM 24 P G A2332 54.437 108.619 112.893 1.00 33.68 P
ATOM 25 OP1 G A2332 53.200 108.632 113.699 1.00 31.85 O
ATOM 26 OP2 G A2332 55.660 109.265 113.416 1.00 34.09 O
ATOM 27 O5' G A2332 54.826 107.128 112.484 1.00 33.21 O
TER
ATOM 1 O3' C B2017 48.812 110.864 103.208 1.00 37.93 O
ATOM 2 P G B2018 48.007 111.342 104.520 1.00 39.53 P
ATOM 3 OP1 G B2018 47.260 110.204 105.120 1.00 40.77 O
ATOM 4 OP2 G B2018 47.291 112.601 104.206 1.00 39.65 O
ATOM 5 O5' G B2018 49.200 111.736 105.484 1.00 38.28 O
ATOM 6 C5' G B2018 49.114 111.606 106.900 1.00 38.49 C
ATOM 7 C4' G B2018 50.496 111.396 107.450 1.00 40.05 C
ATOM 8 O4' G B2018 50.806 109.980 107.429 1.00 40.05 O
ATOM 9 C3' G B2018 51.589 112.088 106.639 1.00 41.20 C
ATOM 10 O3' G B2018 52.633 112.530 107.484 1.00 43.62 O
ATOM 11 C2' G B2018 52.071 110.972 105.717 1.00 40.95 C
ATOM 12 O2' G B2018 53.396 111.149 105.268 1.00 40.46 O
ATOM 13 C1' G B2018 51.944 109.750 106.624 1.00 39.76 C
ATOM 14 N9 G B2018 51.725 108.502 105.897 1.00 39.32 N
ATOM 15 C8 G B2018 50.628 108.164 105.139 1.00 37.67 C
ATOM 16 N7 G B2018 50.713 106.971 104.618 1.00 37.48 N
ATOM 17 C5 G B2018 51.940 106.491 105.055 1.00 37.92 C
ATOM 18 C6 G B2018 52.571 105.242 104.827 1.00 38.46 C
ATOM 19 O6 G B2018 52.161 104.278 104.167 1.00 39.99 O
ATOM 20 N1 G B2018 53.804 105.171 105.467 1.00 38.00 N
ATOM 21 C2 G B2018 54.355 106.165 106.234 1.00 36.50 C
ATOM 22 N2 G B2018 55.553 105.905 106.767 1.00 34.18 N
ATOM 23 N3 G B2018 53.774 107.327 106.461 1.00 36.31 N
ATOM 24 C4 G B2018 52.579 107.423 105.844 1.00 37.81 C
ATOM 25 P G B2019 52.988 114.095 107.558 1.00 43.10 P
ATOM 26 OP1 G B2019 53.471 114.547 106.228 1.00 41.47 O
ATOM 27 OP2 G B2019 53.838 114.287 108.754 1.00 46.28 O
ATOM 28 O5' G B2019 51.609 114.815 107.893 1.00 40.74 O
TER
Atoms:
OP1: (55.844,114.036,113.011)
OP2: (58.233,113.278,112.430)
C3': (55.110,109.750,110.643)
C1': (56.006,109.723,108.465)
C5': (54.951,112.288,110.735)
O4': (55.587,111.050,108.760)
C8: (58.336,110.586,109.066)
O2': (54.132,108.276,108.952)
C6: (60.557,108.116,107.931)
C5: (59.551,109.006,108.336)
C4: (58.247,108.644,108.060)
P: (56.851,113.603,111.996)
C4': (54.733,111.036,109.933)
C2': (55.339,108.794,109.483)
C2: (58.872,106.757,107.129)
N1: (60.174,106.973,107.322)
N3: (57.835,107.521,107.453)
N6: (61.860,108.339,108.107)
N7: (59.594,110.235,108.975)
N9: (57.466,109.668,108.533)
O5': (56.297,112.329,111.217)
O3': (54.071,109.316,111.503)
OP2: (58.233,113.278,112.430)
C3': (55.110,109.750,110.643)
C1': (56.006,109.723,108.465)
C5': (54.951,112.288,110.735)
O4': (55.587,111.050,108.760)
C8: (58.336,110.586,109.066)
O2': (54.132,108.276,108.952)
C6: (60.557,108.116,107.931)
C5: (59.551,109.006,108.336)
C4: (58.247,108.644,108.060)
P: (56.851,113.603,111.996)
C4': (54.733,111.036,109.933)
C2': (55.339,108.794,109.483)
C2: (58.872,106.757,107.129)
N1: (60.174,106.973,107.322)
N3: (57.835,107.521,107.453)
N6: (61.860,108.339,108.107)
N7: (59.594,110.235,108.975)
N9: (57.466,109.668,108.533)
O5': (56.297,112.329,111.217)
O3': (54.071,109.316,111.503)
OP1: (47.260,110.204,105.120)
OP2: (47.291,112.601,104.206)
C3': (51.589,112.088,106.639)
C1': (51.944,109.750,106.624)
C5': (49.114,111.606,106.900)
O6: (52.161,104.278,104.167)
O4': (50.806,109.980,107.429)
C8: (50.628,108.164,105.139)
C2: (54.355,106.165,106.234)
C6: (52.571,105.242,104.827)
C5: (51.940,106.491,105.055)
C4: (52.579,107.423,105.844)
P: (48.007,111.342,104.520)
C4': (50.496,111.396,107.450)
C2': (52.071,110.972,105.717)
O2': (53.396,111.149,105.268)
N1: (53.804,105.171,105.467)
N2: (55.553,105.905,106.767)
N3: (53.774,107.327,106.461)
N7: (50.713,106.971,104.618)
N9: (51.725,108.502,105.897)
O5': (49.200,111.736,105.484)
O3': (52.633,112.530,107.484)
OP2: (47.291,112.601,104.206)
C3': (51.589,112.088,106.639)
C1': (51.944,109.750,106.624)
C5': (49.114,111.606,106.900)
O6: (52.161,104.278,104.167)
O4': (50.806,109.980,107.429)
C8: (50.628,108.164,105.139)
C2: (54.355,106.165,106.234)
C6: (52.571,105.242,104.827)
C5: (51.940,106.491,105.055)
C4: (52.579,107.423,105.844)
P: (48.007,111.342,104.520)
C4': (50.496,111.396,107.450)
C2': (52.071,110.972,105.717)
O2': (53.396,111.149,105.268)
N1: (53.804,105.171,105.467)
N2: (55.553,105.905,106.767)
N3: (53.774,107.327,106.461)
N7: (50.713,106.971,104.618)
N9: (51.725,108.502,105.897)
O5': (49.200,111.736,105.484)
O3': (52.633,112.530,107.484)
Image (generated by PyMOL):