Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1276:A1213
Extra
PDB:
ATOM 1 O3' A A1275 259.373 116.256 -17.898 1.00 84.95 O
ATOM 2 P G A1276 258.397 115.154 -17.275 1.00 85.48 P
ATOM 3 OP1 G A1276 258.564 113.898 -18.062 1.00 84.15 O
ATOM 4 OP2 G A1276 257.055 115.771 -17.156 1.00 87.44 O
ATOM 5 O5' G A1276 259.045 114.931 -15.829 1.00 86.91 O
ATOM 6 C5' G A1276 258.329 114.304 -14.735 1.00 86.53 C
ATOM 7 C4' G A1276 257.841 115.363 -13.776 1.00 86.31 C
ATOM 8 O4' G A1276 256.506 115.720 -14.190 1.00 84.51 O
ATOM 9 C3' G A1276 257.721 115.007 -12.290 1.00 87.28 C
ATOM 10 O3' G A1276 259.028 115.173 -11.624 1.00 87.86 O
ATOM 11 C2' G A1276 256.618 115.941 -11.809 1.00 87.80 C
ATOM 12 O2' G A1276 257.115 117.230 -11.496 1.00 90.27 O
ATOM 13 C1' G A1276 255.748 116.077 -13.059 1.00 86.60 C
ATOM 14 N9 G A1276 254.477 115.361 -13.074 1.00 84.21 N
ATOM 15 C8 G A1276 254.253 114.007 -13.054 1.00 83.49 C
ATOM 16 N7 G A1276 252.983 113.702 -13.125 1.00 82.69 N
ATOM 17 C5 G A1276 252.338 114.930 -13.181 1.00 81.74 C
ATOM 18 C6 G A1276 250.958 115.247 -13.273 1.00 82.37 C
ATOM 19 O6 G A1276 249.990 114.478 -13.328 1.00 83.22 O
ATOM 20 N1 G A1276 250.751 116.623 -13.304 1.00 82.13 N
ATOM 21 C2 G A1276 251.743 117.572 -13.252 1.00 82.11 C
ATOM 22 N2 G A1276 251.360 118.855 -13.299 1.00 81.43 N
ATOM 23 N3 G A1276 253.021 117.286 -13.163 1.00 81.67 N
ATOM 24 C4 G A1276 253.246 115.958 -13.137 1.00 82.21 C
ATOM 25 P U A1277 259.210 116.085 -10.281 1.00 87.49 P
ATOM 26 OP1 U A1277 260.461 115.559 -9.655 1.00 88.23 O
ATOM 27 OP2 U A1277 257.992 116.144 -9.435 1.00 89.37 O
ATOM 28 O5' U A1277 259.554 117.545 -10.845 1.00 83.91 O
TER
ATOM 1 O3' A B1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 2 P C B1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 3 OP1 C B1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 4 OP2 C B1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 5 O5' C B1213 248.559 123.280 -11.451 1.00 75.45 O
ATOM 6 C5' C B1213 249.693 122.387 -11.377 1.00 74.51 C
ATOM 7 C4' C B1213 249.367 121.060 -12.026 1.00 73.77 C
ATOM 8 O4' C B1213 248.233 120.476 -11.344 1.00 73.80 O
ATOM 9 C3' C B1213 248.976 121.076 -13.499 1.00 73.80 C
ATOM 10 O3' C B1213 250.126 120.972 -14.323 1.00 74.91 O
ATOM 11 C2' C B1213 248.137 119.813 -13.634 1.00 73.32 C
ATOM 12 O2' C B1213 248.941 118.669 -13.834 1.00 72.78 O
ATOM 13 C1' C B1213 247.449 119.734 -12.266 1.00 72.79 C
ATOM 14 N1 C B1213 246.062 120.265 -12.271 1.00 70.22 N
ATOM 15 C2 C B1213 245.014 119.426 -12.679 1.00 68.59 C
ATOM 16 O2 C B1213 245.256 118.240 -12.955 1.00 69.98 O
ATOM 17 N3 C B1213 243.765 119.929 -12.763 1.00 65.76 N
ATOM 18 C4 C B1213 243.537 121.199 -12.455 1.00 64.95 C
ATOM 19 N4 C B1213 242.307 121.663 -12.611 1.00 65.59 N
ATOM 20 C5 C B1213 244.565 122.057 -11.989 1.00 66.62 C
ATOM 21 C6 C B1213 245.802 121.556 -11.913 1.00 68.66 C
ATOM 22 P A B1214 250.019 121.255 -15.903 1.00 75.76 P
ATOM 23 OP1 A B1214 248.649 120.901 -16.353 1.00 75.67 O
ATOM 24 OP2 A B1214 251.193 120.593 -16.556 1.00 79.09 O
ATOM 25 O5' A B1214 250.209 122.825 -16.016 1.00 74.41 O
TER
ATOM 2 P G A1276 258.397 115.154 -17.275 1.00 85.48 P
ATOM 3 OP1 G A1276 258.564 113.898 -18.062 1.00 84.15 O
ATOM 4 OP2 G A1276 257.055 115.771 -17.156 1.00 87.44 O
ATOM 5 O5' G A1276 259.045 114.931 -15.829 1.00 86.91 O
ATOM 6 C5' G A1276 258.329 114.304 -14.735 1.00 86.53 C
ATOM 7 C4' G A1276 257.841 115.363 -13.776 1.00 86.31 C
ATOM 8 O4' G A1276 256.506 115.720 -14.190 1.00 84.51 O
ATOM 9 C3' G A1276 257.721 115.007 -12.290 1.00 87.28 C
ATOM 10 O3' G A1276 259.028 115.173 -11.624 1.00 87.86 O
ATOM 11 C2' G A1276 256.618 115.941 -11.809 1.00 87.80 C
ATOM 12 O2' G A1276 257.115 117.230 -11.496 1.00 90.27 O
ATOM 13 C1' G A1276 255.748 116.077 -13.059 1.00 86.60 C
ATOM 14 N9 G A1276 254.477 115.361 -13.074 1.00 84.21 N
ATOM 15 C8 G A1276 254.253 114.007 -13.054 1.00 83.49 C
ATOM 16 N7 G A1276 252.983 113.702 -13.125 1.00 82.69 N
ATOM 17 C5 G A1276 252.338 114.930 -13.181 1.00 81.74 C
ATOM 18 C6 G A1276 250.958 115.247 -13.273 1.00 82.37 C
ATOM 19 O6 G A1276 249.990 114.478 -13.328 1.00 83.22 O
ATOM 20 N1 G A1276 250.751 116.623 -13.304 1.00 82.13 N
ATOM 21 C2 G A1276 251.743 117.572 -13.252 1.00 82.11 C
ATOM 22 N2 G A1276 251.360 118.855 -13.299 1.00 81.43 N
ATOM 23 N3 G A1276 253.021 117.286 -13.163 1.00 81.67 N
ATOM 24 C4 G A1276 253.246 115.958 -13.137 1.00 82.21 C
ATOM 25 P U A1277 259.210 116.085 -10.281 1.00 87.49 P
ATOM 26 OP1 U A1277 260.461 115.559 -9.655 1.00 88.23 O
ATOM 27 OP2 U A1277 257.992 116.144 -9.435 1.00 89.37 O
ATOM 28 O5' U A1277 259.554 117.545 -10.845 1.00 83.91 O
TER
ATOM 1 O3' A B1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 2 P C B1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 3 OP1 C B1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 4 OP2 C B1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 5 O5' C B1213 248.559 123.280 -11.451 1.00 75.45 O
ATOM 6 C5' C B1213 249.693 122.387 -11.377 1.00 74.51 C
ATOM 7 C4' C B1213 249.367 121.060 -12.026 1.00 73.77 C
ATOM 8 O4' C B1213 248.233 120.476 -11.344 1.00 73.80 O
ATOM 9 C3' C B1213 248.976 121.076 -13.499 1.00 73.80 C
ATOM 10 O3' C B1213 250.126 120.972 -14.323 1.00 74.91 O
ATOM 11 C2' C B1213 248.137 119.813 -13.634 1.00 73.32 C
ATOM 12 O2' C B1213 248.941 118.669 -13.834 1.00 72.78 O
ATOM 13 C1' C B1213 247.449 119.734 -12.266 1.00 72.79 C
ATOM 14 N1 C B1213 246.062 120.265 -12.271 1.00 70.22 N
ATOM 15 C2 C B1213 245.014 119.426 -12.679 1.00 68.59 C
ATOM 16 O2 C B1213 245.256 118.240 -12.955 1.00 69.98 O
ATOM 17 N3 C B1213 243.765 119.929 -12.763 1.00 65.76 N
ATOM 18 C4 C B1213 243.537 121.199 -12.455 1.00 64.95 C
ATOM 19 N4 C B1213 242.307 121.663 -12.611 1.00 65.59 N
ATOM 20 C5 C B1213 244.565 122.057 -11.989 1.00 66.62 C
ATOM 21 C6 C B1213 245.802 121.556 -11.913 1.00 68.66 C
ATOM 22 P A B1214 250.019 121.255 -15.903 1.00 75.76 P
ATOM 23 OP1 A B1214 248.649 120.901 -16.353 1.00 75.67 O
ATOM 24 OP2 A B1214 251.193 120.593 -16.556 1.00 79.09 O
ATOM 25 O5' A B1214 250.209 122.825 -16.016 1.00 74.41 O
TER
Atoms:
OP1: (258.564,113.898,-18.062)
OP2: (257.055,115.771,-17.156)
C3': (257.721,115.007,-12.290)
C1': (255.748,116.077,-13.059)
C5': (258.329,114.304,-14.735)
O6: (249.990,114.478,-13.328)
O4': (256.506,115.720,-14.190)
C8: (254.253,114.007,-13.054)
C2: (251.743,117.572,-13.252)
C6: (250.958,115.247,-13.273)
C5: (252.338,114.930,-13.181)
C4: (253.246,115.958,-13.137)
P: (258.397,115.154,-17.275)
C4': (257.841,115.363,-13.776)
C2': (256.618,115.941,-11.809)
O2': (257.115,117.230,-11.496)
N1: (250.751,116.623,-13.304)
N2: (251.360,118.855,-13.299)
N3: (253.021,117.286,-13.163)
N7: (252.983,113.702,-13.125)
N9: (254.477,115.361,-13.074)
O5': (259.045,114.931,-15.829)
O3': (259.028,115.173,-11.624)
OP2: (257.055,115.771,-17.156)
C3': (257.721,115.007,-12.290)
C1': (255.748,116.077,-13.059)
C5': (258.329,114.304,-14.735)
O6: (249.990,114.478,-13.328)
O4': (256.506,115.720,-14.190)
C8: (254.253,114.007,-13.054)
C2: (251.743,117.572,-13.252)
C6: (250.958,115.247,-13.273)
C5: (252.338,114.930,-13.181)
C4: (253.246,115.958,-13.137)
P: (258.397,115.154,-17.275)
C4': (257.841,115.363,-13.776)
C2': (256.618,115.941,-11.809)
O2': (257.115,117.230,-11.496)
N1: (250.751,116.623,-13.304)
N2: (251.360,118.855,-13.299)
N3: (253.021,117.286,-13.163)
N7: (252.983,113.702,-13.125)
N9: (254.477,115.361,-13.074)
O5': (259.045,114.931,-15.829)
O3': (259.028,115.173,-11.624)
C2: (245.014,119.426,-12.679)
OP1: (249.470,125.131,-10.022)
OP2: (246.975,125.007,-10.573)
C4: (243.537,121.199,-12.455)
O5': (248.559,123.280,-11.451)
C3': (248.976,121.076,-13.499)
C1': (247.449,119.734,-12.266)
O4': (248.233,120.476,-11.344)
C5': (249.693,122.387,-11.377)
P: (248.245,124.310,-10.267)
O2: (245.256,118.240,-12.955)
C4': (249.367,121.060,-12.026)
C2': (248.137,119.813,-13.634)
O2': (248.941,118.669,-13.834)
N1: (246.062,120.265,-12.271)
N3: (243.765,119.929,-12.763)
N4: (242.307,121.663,-12.611)
C6: (245.802,121.556,-11.913)
C5: (244.565,122.057,-11.989)
O3': (250.126,120.972,-14.323)
OP1: (249.470,125.131,-10.022)
OP2: (246.975,125.007,-10.573)
C4: (243.537,121.199,-12.455)
O5': (248.559,123.280,-11.451)
C3': (248.976,121.076,-13.499)
C1': (247.449,119.734,-12.266)
O4': (248.233,120.476,-11.344)
C5': (249.693,122.387,-11.377)
P: (248.245,124.310,-10.267)
O2: (245.256,118.240,-12.955)
C4': (249.367,121.060,-12.026)
C2': (248.137,119.813,-13.634)
O2': (248.941,118.669,-13.834)
N1: (246.062,120.265,-12.271)
N3: (243.765,119.929,-12.763)
N4: (242.307,121.663,-12.611)
C6: (245.802,121.556,-11.913)
C5: (244.565,122.057,-11.989)
O3': (250.126,120.972,-14.323)
Image (generated by PyMOL):