Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2508:A1121
Extra
PDB:
ATOM 1 O3' C A2507 -58.936 98.067 176.690 1.00 0.01 O
ATOM 2 P A A2508 -60.129 97.192 176.089 1.00 0.01 P
ATOM 3 OP1 A A2508 -61.176 97.121 177.129 1.00 0.01 O
ATOM 4 OP2 A A2508 -59.538 95.918 175.585 1.00 0.01 O
ATOM 5 O5' A A2508 -60.632 98.083 174.871 1.00 0.01 O
ATOM 6 C5' A A2508 -61.677 99.023 175.033 1.00 0.01 C
ATOM 7 C4' A A2508 -62.310 99.356 173.715 1.00 0.01 C
ATOM 8 O4' A A2508 -61.278 99.648 172.757 1.00 0.01 O
ATOM 9 C3' A A2508 -63.116 98.247 173.069 1.00 0.01 C
ATOM 10 O3' A A2508 -64.436 98.196 173.542 1.00 0.01 O
ATOM 11 C2' A A2508 -63.034 98.566 171.590 1.00 0.01 C
ATOM 12 O2' A A2508 -63.993 99.548 171.244 1.00 0.01 O
ATOM 13 C1' A A2508 -61.653 99.191 171.478 1.00 0.01 C
ATOM 14 N9 A A2508 -60.609 98.258 170.986 1.00 0.15 N
ATOM 15 C8 A A2508 -59.671 97.610 171.753 1.00 0.15 C
ATOM 16 N7 A A2508 -58.814 96.903 171.063 1.00 0.15 N
ATOM 17 C5 A A2508 -59.169 97.135 169.740 1.00 0.15 C
ATOM 18 C6 A A2508 -58.633 96.690 168.521 1.00 0.15 C
ATOM 19 N6 A A2508 -57.589 95.879 168.421 1.00 0.15 N
ATOM 20 N1 A A2508 -59.213 97.094 167.383 1.00 0.15 N
ATOM 21 C2 A A2508 -60.273 97.897 167.458 1.00 0.15 C
ATOM 22 N3 A A2508 -60.872 98.387 168.539 1.00 0.15 N
ATOM 23 C4 A A2508 -60.266 97.969 169.673 1.00 0.15 C
ATOM 24 P C A2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 25 OP1 C A2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 26 OP2 C A2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 27 O5' C A2509 -65.362 96.286 172.270 1.00 0.05 O
TER
ATOM 1 O3' A B1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 2 P G B1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 3 OP1 G B1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 4 OP2 G B1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 5 O5' G B1121 -68.622 101.543 173.031 1.00 7.87 O
ATOM 6 C5' G B1121 -67.803 100.472 172.575 1.00 7.87 C
ATOM 7 C4' G B1121 -66.356 100.896 172.477 1.00 7.87 C
ATOM 8 O4' G B1121 -65.966 101.022 171.078 1.00 7.87 O
ATOM 9 C3' G B1121 -66.045 102.247 173.129 1.00 7.87 C
ATOM 10 O3' G B1121 -64.903 102.147 173.953 1.00 7.87 O
ATOM 11 C2' G B1121 -65.745 103.180 171.961 1.00 7.87 C
ATOM 12 O2' G B1121 -64.786 104.164 172.261 1.00 7.87 O
ATOM 13 C1' G B1121 -65.234 102.217 170.903 1.00 7.87 C
ATOM 14 N9 G B1121 -65.405 102.691 169.527 1.00 7.88 N
ATOM 15 C8 G B1121 -65.794 103.948 169.115 1.00 7.88 C
ATOM 16 N7 G B1121 -65.822 104.073 167.811 1.00 7.88 N
ATOM 17 C5 G B1121 -65.394 102.829 167.335 1.00 7.88 C
ATOM 18 C6 G B1121 -65.195 102.343 166.012 1.00 7.88 C
ATOM 19 O6 G B1121 -65.359 102.926 164.912 1.00 7.88 O
ATOM 20 N1 G B1121 -64.762 101.018 166.023 1.00 7.88 N
ATOM 21 C2 G B1121 -64.538 100.250 167.132 1.00 7.88 C
ATOM 22 N2 G B1121 -64.119 98.983 166.915 1.00 7.88 N
ATOM 23 N3 G B1121 -64.702 100.696 168.356 1.00 7.88 N
ATOM 24 C4 G B1121 -65.132 101.972 168.383 1.00 7.88 C
ATOM 25 P A B1122 -64.920 102.852 175.376 1.00 0.02 P
ATOM 26 OP1 A B1122 -65.837 102.081 176.248 1.00 0.02 O
ATOM 27 OP2 A B1122 -65.195 104.306 175.131 1.00 0.02 O
ATOM 28 O5' A B1122 -63.434 102.659 175.865 1.00 0.02 O
TER
ATOM 2 P A A2508 -60.129 97.192 176.089 1.00 0.01 P
ATOM 3 OP1 A A2508 -61.176 97.121 177.129 1.00 0.01 O
ATOM 4 OP2 A A2508 -59.538 95.918 175.585 1.00 0.01 O
ATOM 5 O5' A A2508 -60.632 98.083 174.871 1.00 0.01 O
ATOM 6 C5' A A2508 -61.677 99.023 175.033 1.00 0.01 C
ATOM 7 C4' A A2508 -62.310 99.356 173.715 1.00 0.01 C
ATOM 8 O4' A A2508 -61.278 99.648 172.757 1.00 0.01 O
ATOM 9 C3' A A2508 -63.116 98.247 173.069 1.00 0.01 C
ATOM 10 O3' A A2508 -64.436 98.196 173.542 1.00 0.01 O
ATOM 11 C2' A A2508 -63.034 98.566 171.590 1.00 0.01 C
ATOM 12 O2' A A2508 -63.993 99.548 171.244 1.00 0.01 O
ATOM 13 C1' A A2508 -61.653 99.191 171.478 1.00 0.01 C
ATOM 14 N9 A A2508 -60.609 98.258 170.986 1.00 0.15 N
ATOM 15 C8 A A2508 -59.671 97.610 171.753 1.00 0.15 C
ATOM 16 N7 A A2508 -58.814 96.903 171.063 1.00 0.15 N
ATOM 17 C5 A A2508 -59.169 97.135 169.740 1.00 0.15 C
ATOM 18 C6 A A2508 -58.633 96.690 168.521 1.00 0.15 C
ATOM 19 N6 A A2508 -57.589 95.879 168.421 1.00 0.15 N
ATOM 20 N1 A A2508 -59.213 97.094 167.383 1.00 0.15 N
ATOM 21 C2 A A2508 -60.273 97.897 167.458 1.00 0.15 C
ATOM 22 N3 A A2508 -60.872 98.387 168.539 1.00 0.15 N
ATOM 23 C4 A A2508 -60.266 97.969 169.673 1.00 0.15 C
ATOM 24 P C A2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 25 OP1 C A2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 26 OP2 C A2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 27 O5' C A2509 -65.362 96.286 172.270 1.00 0.05 O
TER
ATOM 1 O3' A B1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 2 P G B1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 3 OP1 G B1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 4 OP2 G B1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 5 O5' G B1121 -68.622 101.543 173.031 1.00 7.87 O
ATOM 6 C5' G B1121 -67.803 100.472 172.575 1.00 7.87 C
ATOM 7 C4' G B1121 -66.356 100.896 172.477 1.00 7.87 C
ATOM 8 O4' G B1121 -65.966 101.022 171.078 1.00 7.87 O
ATOM 9 C3' G B1121 -66.045 102.247 173.129 1.00 7.87 C
ATOM 10 O3' G B1121 -64.903 102.147 173.953 1.00 7.87 O
ATOM 11 C2' G B1121 -65.745 103.180 171.961 1.00 7.87 C
ATOM 12 O2' G B1121 -64.786 104.164 172.261 1.00 7.87 O
ATOM 13 C1' G B1121 -65.234 102.217 170.903 1.00 7.87 C
ATOM 14 N9 G B1121 -65.405 102.691 169.527 1.00 7.88 N
ATOM 15 C8 G B1121 -65.794 103.948 169.115 1.00 7.88 C
ATOM 16 N7 G B1121 -65.822 104.073 167.811 1.00 7.88 N
ATOM 17 C5 G B1121 -65.394 102.829 167.335 1.00 7.88 C
ATOM 18 C6 G B1121 -65.195 102.343 166.012 1.00 7.88 C
ATOM 19 O6 G B1121 -65.359 102.926 164.912 1.00 7.88 O
ATOM 20 N1 G B1121 -64.762 101.018 166.023 1.00 7.88 N
ATOM 21 C2 G B1121 -64.538 100.250 167.132 1.00 7.88 C
ATOM 22 N2 G B1121 -64.119 98.983 166.915 1.00 7.88 N
ATOM 23 N3 G B1121 -64.702 100.696 168.356 1.00 7.88 N
ATOM 24 C4 G B1121 -65.132 101.972 168.383 1.00 7.88 C
ATOM 25 P A B1122 -64.920 102.852 175.376 1.00 0.02 P
ATOM 26 OP1 A B1122 -65.837 102.081 176.248 1.00 0.02 O
ATOM 27 OP2 A B1122 -65.195 104.306 175.131 1.00 0.02 O
ATOM 28 O5' A B1122 -63.434 102.659 175.865 1.00 0.02 O
TER
Atoms:
OP1: (-61.176,97.121,177.129)
OP2: (-59.538,95.918,175.585)
C3': (-63.116,98.247,173.069)
C1': (-61.653,99.191,171.478)
C5': (-61.677,99.023,175.033)
O4': (-61.278,99.648,172.757)
C8: (-59.671,97.610,171.753)
O2': (-63.993,99.548,171.244)
C6: (-58.633,96.690,168.521)
C5: (-59.169,97.135,169.740)
C4: (-60.266,97.969,169.673)
P: (-60.129,97.192,176.089)
C4': (-62.310,99.356,173.715)
C2': (-63.034,98.566,171.590)
C2: (-60.273,97.897,167.458)
N1: (-59.213,97.094,167.383)
N3: (-60.872,98.387,168.539)
N6: (-57.589,95.879,168.421)
N7: (-58.814,96.903,171.063)
N9: (-60.609,98.258,170.986)
O5': (-60.632,98.083,174.871)
O3': (-64.436,98.196,173.542)
OP2: (-59.538,95.918,175.585)
C3': (-63.116,98.247,173.069)
C1': (-61.653,99.191,171.478)
C5': (-61.677,99.023,175.033)
O4': (-61.278,99.648,172.757)
C8: (-59.671,97.610,171.753)
O2': (-63.993,99.548,171.244)
C6: (-58.633,96.690,168.521)
C5: (-59.169,97.135,169.740)
C4: (-60.266,97.969,169.673)
P: (-60.129,97.192,176.089)
C4': (-62.310,99.356,173.715)
C2': (-63.034,98.566,171.590)
C2: (-60.273,97.897,167.458)
N1: (-59.213,97.094,167.383)
N3: (-60.872,98.387,168.539)
N6: (-57.589,95.879,168.421)
N7: (-58.814,96.903,171.063)
N9: (-60.609,98.258,170.986)
O5': (-60.632,98.083,174.871)
O3': (-64.436,98.196,173.542)
OP1: (-70.210,101.168,174.940)
OP2: (-71.019,102.295,172.784)
C3': (-66.045,102.247,173.129)
C1': (-65.234,102.217,170.903)
C5': (-67.803,100.472,172.575)
O6: (-65.359,102.926,164.912)
O4': (-65.966,101.022,171.078)
C8: (-65.794,103.948,169.115)
C2: (-64.538,100.250,167.132)
C6: (-65.195,102.343,166.012)
C5: (-65.394,102.829,167.335)
C4: (-65.132,101.972,168.383)
P: (-70.129,101.309,173.469)
C4': (-66.356,100.896,172.477)
C2': (-65.745,103.180,171.961)
O2': (-64.786,104.164,172.261)
N1: (-64.762,101.018,166.023)
N2: (-64.119,98.983,166.915)
N3: (-64.702,100.696,168.356)
N7: (-65.822,104.073,167.811)
N9: (-65.405,102.691,169.527)
O5': (-68.622,101.543,173.031)
O3': (-64.903,102.147,173.953)
OP2: (-71.019,102.295,172.784)
C3': (-66.045,102.247,173.129)
C1': (-65.234,102.217,170.903)
C5': (-67.803,100.472,172.575)
O6: (-65.359,102.926,164.912)
O4': (-65.966,101.022,171.078)
C8: (-65.794,103.948,169.115)
C2: (-64.538,100.250,167.132)
C6: (-65.195,102.343,166.012)
C5: (-65.394,102.829,167.335)
C4: (-65.132,101.972,168.383)
P: (-70.129,101.309,173.469)
C4': (-66.356,100.896,172.477)
C2': (-65.745,103.180,171.961)
O2': (-64.786,104.164,172.261)
N1: (-64.762,101.018,166.023)
N2: (-64.119,98.983,166.915)
N3: (-64.702,100.696,168.356)
N7: (-65.822,104.073,167.811)
N9: (-65.405,102.691,169.527)
O5': (-68.622,101.543,173.031)
O3': (-64.903,102.147,173.953)
Image (generated by PyMOL):